FFCP PHASE1:Mm9::chr5:54098747..54098758,-: Difference between revisions
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{{FFCP|EntrezGene=12425|HGNC=|MCL_coexpression_id=85|UniProt=O08786|association_with_transcript=184bp_to_ENSMUST00000031093,NM_009827,uc008xlm.2_5end|description=CAGE_peak_2_at_Cckar_5end|id=chr5:54098747..54098758,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!1.84e-18!59;UBERON:0001264!1.36e-15!12;UBERON:0003922!1.36e-15!12;UBERON:0002114!1.36e-15!12;UBERON:0003923!1.36e-15!12;UBERON:0003924!1.36e-15!12;UBERON:0003921!1.36e-15!12;UBERON:0002048!3.22e-14!14;UBERON:0000117!3.22e-14!14;UBERON:0000171!3.22e-14!14;UBERON:0000170!3.22e-14!14;UBERON:0005597!3.22e-14!14;UBERON:0000118!3.22e-14!14;UBERON:0001045!4.73e-14!13;UBERON:0004921!8.22e-14!126;UBERON:0004185!8.22e-14!126;UBERON:0000160!1.50e-13!43;UBERON:0001007!2.48e-13!128;UBERON:0001555!2.48e-13!128;UBERON:0007026!2.48e-13!128;UBERON:0004119!7.19e-13!130;UBERON:0000925!7.19e-13!130;UBERON:0006595!7.19e-13!130;UBERON:0005153!2.06e-12!17;UBERON:0002108!2.97e-12!16;UBERON:0005178!6.64e-11!17;UBERON:0005181!6.64e-11!17;UBERON:0002224!6.64e-11!17;UBERON:0000915!6.64e-11!17;UBERON:0008947!6.64e-11!17;UBERON:0003258!6.64e-11!17;UBERON:0002075!9.52e-10!19;UBERON:0001041!1.75e-09!92;UBERON:0000464!5.28e-09!57;UBERON:0000077!5.32e-09!97;UBERON:0005177!5.34e-09!85;UBERON:0003104!3.47e-08!131;UBERON:0009142!3.47e-08!131;UBERON:0002100!1.66e-07!98;UBERON:0000310!3.21e-07!6;UBERON:0001443!3.21e-07!6;UBERON:0005157!6.16e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0001264,2.27e-35,12;UBERON:0002075,2.25e-21,19;UBERON:0005177,9.96e-15,79;UBERON:0002048,6.07e-14,14;UBERON:0000117,6.07e-14,14;UBERON:0000171,6.07e-14,14;UBERON:0000170,6.07e-14,14;UBERON:0005597,6.07e-14,14;UBERON:0000118,6.07e-14,14;UBERON:0002100,2.53e-12,90;UBERON:0005153,3.20e-11,17;UBERON:0005178,3.20e-11,17;UBERON:0005181,3.20e-11,17;UBERON:0002224,3.20e-11,17;UBERON:0000915,3.20e-11,17;UBERON:0008947,3.20e-11,17;UBERON:0003258,3.20e-11,17;UBERON:0000310,4.90e-11,6;UBERON:0001443,4.90e-11,6;UBERON:0002323,1.04e-09,37;UBERON:0004458,1.04e-09,37;UBERON:0003886,2.18e-09,38;UBERON:0005157,2.56e-09,20;UBERON:0002553,4.41e-09,39|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0.263772575460388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0.515469845288373,1.4117846723634,0.444756087689741,0.951128130562796,0.474529061544512,0.494096864172033,1.00534083520108,0.596869416123452,1.55971269695296,0.898819408654221,0.216138049874694,0.796565093017469,0,0.114248512609729,0,0.610953983535943,0,0.210407459670956,1.39120381673366,0.442830443938806,1.72698600625512,0.740382983530803,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,2.21703828199926,0.757965647081939,1.30371981153621,1.01847051465113,2.34690248288502,1.00503754465089,0.714130922658041,0.975668239288994,1.10344600874334,0.8858587585951,0.318909537314974,1.3109065177259,1.38147985492716,1.15719246865209,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.9117707509944,1.94224508923985,6.65111825322452,19.8035333743693,16.832207894204,14.4494519533646,11.8877014857382,12.7236805317127,10.6949213515416,17.3820216864699,12.6502330289999,15.470331487228,0,0,0,0,0,0,0.164549020602121,0,0,0,0.220528398054962,0,0.161464426695906,0,0,0,0.291480836629851,0.18542530201051,0,0.82554747185289,0,0,0,0,0,0,0,2.86401185404534,0.316335993581135,3.04979200690273,0.972048067396211,0.418176592028937,1.09181281873089,1.34864346384821,1.73572257023205,1.04702376793612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0,0,0.206035057238894,0,0.252697211763798,0,0,0.280924522409647,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0.188218760830661,0,0.548783918618318,0.263069711437843,0,0,0,0.0985044823755635,0,0.154936841185966,0.578719832943424,0.249810577937946,0,0.214871054048298,0,0,0|short_description=p2@Cckar}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12425 | |||
|HGNC= | |||
|MCL_coexpression_id=85 | |||
|TSSclassifier=NA | |||
|UniProt=O08786 | |||
|association_with_transcript=184bp_to_ENSMUST00000031093,NM_009827,uc008xlm.2_5end | |||
|cluster_id=chr5:54098747..54098758,- | |||
|description=CAGE_peak_2_at_Cckar_5end | |||
|id=chr5:54098747..54098758,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.84e-18!59;UBERON:0001264!1.36e-15!12;UBERON:0003922!1.36e-15!12;UBERON:0002114!1.36e-15!12;UBERON:0003923!1.36e-15!12;UBERON:0003924!1.36e-15!12;UBERON:0003921!1.36e-15!12;UBERON:0002048!3.22e-14!14;UBERON:0000117!3.22e-14!14;UBERON:0000171!3.22e-14!14;UBERON:0000170!3.22e-14!14;UBERON:0005597!3.22e-14!14;UBERON:0000118!3.22e-14!14;UBERON:0001045!4.73e-14!13;UBERON:0004921!8.22e-14!126;UBERON:0004185!8.22e-14!126;UBERON:0000160!1.50e-13!43;UBERON:0001007!2.48e-13!128;UBERON:0001555!2.48e-13!128;UBERON:0007026!2.48e-13!128;UBERON:0004119!7.19e-13!130;UBERON:0000925!7.19e-13!130;UBERON:0006595!7.19e-13!130;UBERON:0005153!2.06e-12!17;UBERON:0002108!2.97e-12!16;UBERON:0005178!6.64e-11!17;UBERON:0005181!6.64e-11!17;UBERON:0002224!6.64e-11!17;UBERON:0000915!6.64e-11!17;UBERON:0008947!6.64e-11!17;UBERON:0003258!6.64e-11!17;UBERON:0002075!9.52e-10!19;UBERON:0001041!1.75e-09!92;UBERON:0000464!5.28e-09!57;UBERON:0000077!5.32e-09!97;UBERON:0005177!5.34e-09!85;UBERON:0003104!3.47e-08!131;UBERON:0009142!3.47e-08!131;UBERON:0002100!1.66e-07!98;UBERON:0000310!3.21e-07!6;UBERON:0001443!3.21e-07!6;UBERON:0005157!6.16e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001264,2.27e-35,12;UBERON:0002075,2.25e-21,19;UBERON:0005177,9.96e-15,79;UBERON:0002048,6.07e-14,14;UBERON:0000117,6.07e-14,14;UBERON:0000171,6.07e-14,14;UBERON:0000170,6.07e-14,14;UBERON:0005597,6.07e-14,14;UBERON:0000118,6.07e-14,14;UBERON:0002100,2.53e-12,90;UBERON:0005153,3.20e-11,17;UBERON:0005178,3.20e-11,17;UBERON:0005181,3.20e-11,17;UBERON:0002224,3.20e-11,17;UBERON:0000915,3.20e-11,17;UBERON:0008947,3.20e-11,17;UBERON:0003258,3.20e-11,17;UBERON:0000310,4.90e-11,6;UBERON:0001443,4.90e-11,6;UBERON:0002323,1.04e-09,37;UBERON:0004458,1.04e-09,37;UBERON:0003886,2.18e-09,38;UBERON:0005157,2.56e-09,20;UBERON:0002553,4.41e-09,39 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0.263772575460388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0.515469845288373,1.4117846723634,0.444756087689741,0.951128130562796,0.474529061544512,0.494096864172033,1.00534083520108,0.596869416123452,1.55971269695296,0.898819408654221,0.216138049874694,0.796565093017469,0,0.114248512609729,0,0.610953983535943,0,0.210407459670956,1.39120381673366,0.442830443938806,1.72698600625512,0.740382983530803,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,2.21703828199926,0.757965647081939,1.30371981153621,1.01847051465113,2.34690248288502,1.00503754465089,0.714130922658041,0.975668239288994,1.10344600874334,0.8858587585951,0.318909537314974,1.3109065177259,1.38147985492716,1.15719246865209,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.9117707509944,1.94224508923985,6.65111825322452,19.8035333743693,16.832207894204,14.4494519533646,11.8877014857382,12.7236805317127,10.6949213515416,17.3820216864699,12.6502330289999,15.470331487228,0,0,0,0,0,0,0.164549020602121,0,0,0,0.220528398054962,0,0.161464426695906,0,0,0,0.291480836629851,0.18542530201051,0,0.82554747185289,0,0,0,0,0,0,0,2.86401185404534,0.316335993581135,3.04979200690273,0.972048067396211,0.418176592028937,1.09181281873089,1.34864346384821,1.73572257023205,1.04702376793612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0,0,0.206035057238894,0,0.252697211763798,0,0,0.280924522409647,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0.188218760830661,0,0.548783918618318,0.263069711437843,0,0,0,0.0985044823755635,0,0.154936841185966,0.578719832943424,0.249810577937946,0,0.214871054048298,0,0,0 | |||
|short_description=p2@Cckar | |||
}} |
Latest revision as of 02:21, 26 September 2015
Short description: | p2@Cckar |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cckar_5end |
Coexpression cluster: | MCL_coexpression_mm9:85 |
Association with transcript: | 184bp_to_ENSMUST00000031093, NM_009827, uc008xlm.2_5end |
EntrezGene: | Cckar |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pancreas | 2.27e-35 | 12 |
viscus | 2.25e-21 | 19 |
trunk region element | 9.96e-15 | 79 |
lung | 6.07e-14 | 14 |
respiratory tube | 6.07e-14 | 14 |
respiration organ | 6.07e-14 | 14 |
pair of lungs | 6.07e-14 | 14 |
lung primordium | 6.07e-14 | 14 |
lung bud | 6.07e-14 | 14 |
trunk | 2.53e-12 | 90 |
epithelial bud | 3.20e-11 | 17 |
thoracic cavity element | 3.20e-11 | 17 |
thoracic segment organ | 3.20e-11 | 17 |
thoracic cavity | 3.20e-11 | 17 |
thoracic segment of trunk | 3.20e-11 | 17 |
respiratory primordium | 3.20e-11 | 17 |
endoderm of foregut | 3.20e-11 | 17 |
breast | 4.90e-11 | 6 |
chest | 4.90e-11 | 6 |
body cavity | 1.04e-09 | 37 |
body cavity or lining | 1.04e-09 | 37 |
body cavity precursor | 2.18e-09 | 38 |
epithelial fold | 2.56e-09 | 20 |
anatomical cavity | 4.41e-09 | 39 |