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FFCP PHASE1:Mm9::chr17:28465549..28465560,+: Difference between revisions

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{{FFCP|EntrezGene=19896|HGNC=|UniProt=|association_with_transcript=0bp_to_ENSMUST00000152665_5end|description=CAGE_peak_3_at_Rpl10a_5end|id=chr17:28465549..28465560,+|ontology_enrichment_celltype=CL:0000221!4.44e-14!44;CL:0000133!4.44e-14!44;CL:0002319!6.68e-14!43;CL:0000540!2.82e-13!33;CL:0000047!2.82e-13!33;CL:0000031!2.82e-13!33;CL:0000404!2.82e-13!33;CL:0000117!4.24e-12!23;CL:0000337!4.24e-12!23;CL:0000723!8.74e-12!91;CL:0000048!8.74e-12!91;CL:0000055!2.02e-11!50;CL:0000393!3.06e-11!39;CL:0000211!3.06e-11!39;CL:0000548!1.67e-10!115;CL:0000004!1.67e-10!115;CL:0000255!1.67e-10!115;CL:0000034!2.22e-09!97;CL:0002371!6.85e-09!118;CL:0002321!3.23e-08!70;CL:0000220!3.23e-08!70;CL:0000144!3.56e-08!121;CL:0000012!3.56e-08!121|ontology_enrichment_celltype_v019_2=CL:0000221,4.43e-14,44;CL:0000133,4.43e-14,44;CL:0002319,6.68e-14,43;CL:0000540,2.82e-13,33;CL:0000047,2.82e-13,33;CL:0000031,2.82e-13,33;CL:0000404,2.82e-13,33;CL:0000117,4.24e-12,23;CL:0000337,4.24e-12,23;CL:0000723,8.64e-12,91;CL:0000048,8.64e-12,91;CL:0000393,3.06e-11,39;CL:0000211,3.06e-11,39;CL:0000034,2.20e-09,97;CL:0002321,3.20e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!8.41e-10!73;UBERON:0005743!8.41e-10!73;UBERON:0000073!4.58e-09!75;UBERON:0001016!4.58e-09!75;UBERON:0004121!1.69e-08!102;UBERON:0000924!1.69e-08!102;UBERON:0006601!1.69e-08!102;UBERON:0002020!1.68e-07!34;UBERON:0002346!3.15e-07!71;UBERON:0003075!3.15e-07!71;UBERON:0007284!3.15e-07!71|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.41e-10,73;UBERON:0001016,4.58e-09,75;UBERON:0004121,4.34e-08,95;UBERON:0000924,4.34e-08,95;UBERON:0006601,4.34e-08,95;UBERON:0002020,1.68e-07,34;UBERON:0000073,5.35e-07,54;UBERON:0002346,6.37e-07,64;UBERON:0003075,6.37e-07,64;UBERON:0007284,6.37e-07,64|phase1_expression=6.08565618998217,2.09385244583617,4.09499315450582,3.0246421130683,4.50806156951712,3.18970616632591,3.73780224952841,8.90950931746876,19.1472662126267,22.7042590532334,8.38968044304974,10.7692414643704,10.6144452557348,9.09172185157573,3.66420737997229,3.84703008040669,5.59649502502517,5.20512572841092,3.70208970735495,5.94145512517242,3.57181818634493,6.55320277925843,4.17919662622297,2.23989391910769,3.67054849707472,2.29692785646008,4.30761996159075,3.23206849028834,2.47030445293286,1.76421090831952,4.21287970245079,3.17515336729816,14.7615549020297,31.6963362030877,2.88851619751275,3.32469290716985,5.10423390655923,0.837063261473815,0,0,0,0.683045484958446,0.971020706062307,7.05022180663233,7.90740063512214,4.58866880404204,6.25913075478431,7.41285531693518,8.34807494390993,9.52706505463989,2.51975558925653,7.18762821824858,8.72469551500229,9.42970784614748,10.7550015725588,3.34437266846731,2.86533439938757,2.57836046138721,12.7459370341547,10.0508286061686,12.6766280701236,4.06613438482959,4.4464739805557,7.64914759689189,7.9109309005358,8.5257613793532,10.4860038681442,10.373894243682,7.25827286159344,8.23536223823313,9.04397333810943,12.5686433137674,17.4486147351775,11.6366259254206,6.42164655822184,10.1114066527102,13.2139057199266,6.2566795661742,3.84016333140609,12.7929699098288,11.4359554503012,10.939180781692,12.2840519560608,8.4414391504752,6.41752640662602,15.6153150301044,11.6744778255264,12.4887628702951,3.25622631332691,3.55186332501892,3.76823835312181,2.58127163094416,7.47968467078526,5.93673510801599,3.24888208723835,2.68816132258401,3.23022166303029,4.26075806445144,5.45550609666024,4.94675404314476,6.05626705039726,0,7.64415719119937,7.11066703153331,5.84525810730278,4.05375784760158,7.07734223020697,2.05530983494308,1.03575153458869,4.89859058913922,4.8575891494518,6.39377504455497,4.61230994512117,6.48107354376277,3.76283862834255,5.52933001850572,3.46072954828123,4.19338135067744,2.65383165584962,5.01477234836968,2.65009822152472,4.84875253135222,0,1.75668478206928,3.97948742945565,2.04365644166873,4.55297473122497,9.59844369589452,4.57452817463033,3.59497534571574,2.28750301409313,11.5602003943835,3.65031072403781,3.06858548796397,3.32460871295296,3.89379031362618,5.39748628406676,4.22983700074316,3.53811861807145,2.94618598241064,6.24578126220978,5.9774547152703,4.68161537493908,5.27466862425003,5.78310242786287,5.89323113310309,6.09061209638237,4.9153640440413,4.52692785158969,4.53854592402766,5.63043597324636,8.54863356467542,6.11703948296315,4.52727816478817,5.76189981942242,5.9710280045548,4.91549231119264,6.17634977075316,4.83077948972507,3.52113813310353,5.39409937956521,6.84235833551856,5.20838418287463,5.70616272067471,4.78228049950873,3.25547522650571,6.17028823219124,1.98501082024188,3.78487654801005,3.2833492815819,1.78351381000883,2.04679982395465,3.73235195994786,2.14730270016595,2.3131894342054,8.33527360272204,2.31293148088659,3.43785736662608,5.54549451391608,5.80591679651096,3.8660238396628,2.62188582010345,2.89091456998331,2.28270751335071,1.89811624617805,2.63518327558417,2.01068167040216,2.98434708061726,3.70431765526328,1.79763881730844,4.32276099749388,2.190554005798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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=19896
|HGNC=
|TSSclassifier=NA
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000152665_5end
|cluster_id=chr17:28465549..28465560,+
|description=CAGE_peak_3_at_Rpl10a_5end
|id=chr17:28465549..28465560,+
|ontology_enrichment_celltype=CL:0000221!4.44e-14!44;CL:0000133!4.44e-14!44;CL:0002319!6.68e-14!43;CL:0000540!2.82e-13!33;CL:0000047!2.82e-13!33;CL:0000031!2.82e-13!33;CL:0000404!2.82e-13!33;CL:0000117!4.24e-12!23;CL:0000337!4.24e-12!23;CL:0000723!8.74e-12!91;CL:0000048!8.74e-12!91;CL:0000055!2.02e-11!50;CL:0000393!3.06e-11!39;CL:0000211!3.06e-11!39;CL:0000548!1.67e-10!115;CL:0000004!1.67e-10!115;CL:0000255!1.67e-10!115;CL:0000034!2.22e-09!97;CL:0002371!6.85e-09!118;CL:0002321!3.23e-08!70;CL:0000220!3.23e-08!70;CL:0000144!3.56e-08!121;CL:0000012!3.56e-08!121
|ontology_enrichment_celltype_v019_2=CL:0000221,4.43e-14,44;CL:0000133,4.43e-14,44;CL:0002319,6.68e-14,43;CL:0000540,2.82e-13,33;CL:0000047,2.82e-13,33;CL:0000031,2.82e-13,33;CL:0000404,2.82e-13,33;CL:0000117,4.24e-12,23;CL:0000337,4.24e-12,23;CL:0000723,8.64e-12,91;CL:0000048,8.64e-12,91;CL:0000393,3.06e-11,39;CL:0000211,3.06e-11,39;CL:0000034,2.20e-09,97;CL:0002321,3.20e-08,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!8.41e-10!73;UBERON:0005743!8.41e-10!73;UBERON:0000073!4.58e-09!75;UBERON:0001016!4.58e-09!75;UBERON:0004121!1.69e-08!102;UBERON:0000924!1.69e-08!102;UBERON:0006601!1.69e-08!102;UBERON:0002020!1.68e-07!34;UBERON:0002346!3.15e-07!71;UBERON:0003075!3.15e-07!71;UBERON:0007284!3.15e-07!71
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.41e-10,73;UBERON:0001016,4.58e-09,75;UBERON:0004121,4.34e-08,95;UBERON:0000924,4.34e-08,95;UBERON:0006601,4.34e-08,95;UBERON:0002020,1.68e-07,34;UBERON:0000073,5.35e-07,54;UBERON:0002346,6.37e-07,64;UBERON:0003075,6.37e-07,64;UBERON:0007284,6.37e-07,64
|phase1_expression=6.08565618998217,2.09385244583617,4.09499315450582,3.0246421130683,4.50806156951712,3.18970616632591,3.73780224952841,8.90950931746876,19.1472662126267,22.7042590532334,8.38968044304974,10.7692414643704,10.6144452557348,9.09172185157573,3.66420737997229,3.84703008040669,5.59649502502517,5.20512572841092,3.70208970735495,5.94145512517242,3.57181818634493,6.55320277925843,4.17919662622297,2.23989391910769,3.67054849707472,2.29692785646008,4.30761996159075,3.23206849028834,2.47030445293286,1.76421090831952,4.21287970245079,3.17515336729816,14.7615549020297,31.6963362030877,2.88851619751275,3.32469290716985,5.10423390655923,0.837063261473815,0,0,0,0.683045484958446,0.971020706062307,7.05022180663233,7.90740063512214,4.58866880404204,6.25913075478431,7.41285531693518,8.34807494390993,9.52706505463989,2.51975558925653,7.18762821824858,8.72469551500229,9.42970784614748,10.7550015725588,3.34437266846731,2.86533439938757,2.57836046138721,12.7459370341547,10.0508286061686,12.6766280701236,4.06613438482959,4.4464739805557,7.64914759689189,7.9109309005358,8.5257613793532,10.4860038681442,10.373894243682,7.25827286159344,8.23536223823313,9.04397333810943,12.5686433137674,17.4486147351775,11.6366259254206,6.42164655822184,10.1114066527102,13.2139057199266,6.2566795661742,3.84016333140609,12.7929699098288,11.4359554503012,10.939180781692,12.2840519560608,8.4414391504752,6.41752640662602,15.6153150301044,11.6744778255264,12.4887628702951,3.25622631332691,3.55186332501892,3.76823835312181,2.58127163094416,7.47968467078526,5.93673510801599,3.24888208723835,2.68816132258401,3.23022166303029,4.26075806445144,5.45550609666024,4.94675404314476,6.05626705039726,0,7.64415719119937,7.11066703153331,5.84525810730278,4.05375784760158,7.07734223020697,2.05530983494308,1.03575153458869,4.89859058913922,4.8575891494518,6.39377504455497,4.61230994512117,6.48107354376277,3.76283862834255,5.52933001850572,3.46072954828123,4.19338135067744,2.65383165584962,5.01477234836968,2.65009822152472,4.84875253135222,0,1.75668478206928,3.97948742945565,2.04365644166873,4.55297473122497,9.59844369589452,4.57452817463033,3.59497534571574,2.28750301409313,11.5602003943835,3.65031072403781,3.06858548796397,3.32460871295296,3.89379031362618,5.39748628406676,4.22983700074316,3.53811861807145,2.94618598241064,6.24578126220978,5.9774547152703,4.68161537493908,5.27466862425003,5.78310242786287,5.89323113310309,6.09061209638237,4.9153640440413,4.52692785158969,4.53854592402766,5.63043597324636,8.54863356467542,6.11703948296315,4.52727816478817,5.76189981942242,5.9710280045548,4.91549231119264,6.17634977075316,4.83077948972507,3.52113813310353,5.39409937956521,6.84235833551856,5.20838418287463,5.70616272067471,4.78228049950873,3.25547522650571,6.17028823219124,1.98501082024188,3.78487654801005,3.2833492815819,1.78351381000883,2.04679982395465,3.73235195994786,2.14730270016595,2.3131894342054,8.33527360272204,2.31293148088659,3.43785736662608,5.54549451391608,5.80591679651096,3.8660238396628,2.62188582010345,2.89091456998331,2.28270751335071,1.89811624617805,2.63518327558417,2.01068167040216,2.98434708061726,3.70431765526328,1.79763881730844,4.32276099749388,2.19055400579804,4.36236172192088,5.59817711787671,4.50830942692322,4.88763186828754,6.0125271021964,2.38461787627083,2.15004226222475,2.95220295959204,3.1399745568275,3.45512058981041,1.77871576252289,4.00428253718626,3.34150291692445,4.27238013531222,3.65148218499305,3.37648023653384,4.07401362850272,3.74004978686054,1.94562272130042,2.74561413188081,2.87536413054709,2.97712758134803,3.12037673114561,1.76805214562978,2.87035861635059,3.85954817090694,2.58654466233247,6.253216588426,3.25929952884052,5.09235257325564,4.69380496577004,4.02015017860358,2.14239276797412,4.29294025287157,2.99506773801763,3.5434350343804,4.14582398509466,2.13022309130459,3.28101465545202,4.05017364028232,0,3.26343410291226,5.90117127622843,4.41498794087572,2.56880943980467,3.7507739709505,5.73772308818364,4.54447668967871,8.20321370482267,5.85658116444958,3.66219776145758,5.73525115086125,6.68396022247182,5.66153061577665,8.50102473517278,6.42962887404886,6.32460444714438,1.92792789853084,3.40656204499845,6.7664929393557,4.72372182125371,6.59880491890142,15.9294166007955,5.58395463156457,4.83717691143602,5.65815239267694,6.496641643377,6.14870295887855,4.65170927702798,5.08947221268508,4.63446591900138,7.58488219045958,5.27093042874994,13.4076206222643,4.76615448055303,5.76195500900193,7.76152102696527,6.85878512101095,5.32020700926821,5.70780216326626,6.41741180348272,7.30715877875038,2.58138878870081,3.1774810629573,8.60060752414351,3.46261131177108,3.55221738730992,3.79971427047382,3.58117032009409,3.28281799490123,4.66369338607761,3.52308073819968,2.22132145037209,3.30218988741156,4.8150577116125,3.39063222608444,3.69074414846768,4.11800711771741,3.0596117398894,4.47844647435706,3.04039942369732,4.77335309007557,5.852215881251,4.47302827679067,5.61627772273367,6.690825472463,6.76923947613151,3.10187996685088,3.38879168473877,5.23511883968059,3.88844919875379,10.5627683224777,4.50954350947352,4.18646328923141,4.46737924234164,7.00024278038572,4.1331143512874,4.39285926276023,3.75543163666413,4.4269490846943,4.19437377702843,3.14059357073808,2.01621004380506,3.79213344753814,4.45995473638361,6.47079030138412,4.15746633528944,5.72885426135941,3.57626438606277,4.32703618271888,3.54454865218985,4.2405908978222,3.65792671943999,4.03304740547362,3.8983152295901,4.52195655709548,4.44132228289962,2.26730383615211,3.10780334723691,2.9605572681127,1.84673078000486,5.21611903886914,4.50437941082837,4.76194223094889,2.78678892802786,5.01572104035363,5.0827665835536,4.60325236507177,2.86447756719698,8.07709957015332,3.42541259885321,7.55393897389701,4.05013500139084,6.30449684513909,5.89085131679466,3.10656187051092,6.64239024538731,3.59122386060928,5.29274177837816,6.80698807791223,7.1268475293514,6.61836630420051,5.55616819504038,4.73880631649457,6.09746498224449,5.30664144703975,6.59046179714623,3.9611531691076,6.18033949301224,3.9695594491019,4.53740204749345,5.23923060411381,5.2147946675185,4.62982129112892,6.59337441285291,5.5935589651071,3.77156177623957,3.54951612318675,4.5302876089991,6.68593516508711,6.39943786824248,6.76916863133412,4.57319932181931,4.47218509444333,5.83957689537206,3.36685362994643,4.50813068871862,6.59980031916275,5.32000356120596,6.97215785336847,4.24394544158511,6.49507502638659,3.97683734357194,4.94203424311086,4.78220830172108,5.29419405886837,3.01428186306548
|short_description=p3@Rpl10a
}}

Latest revision as of 04:15, 26 September 2015

Short description:p3@Rpl10a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Rpl10a_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000152665_5end
EntrezGene:Rpl10a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Rpl10a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.09
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.02
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.19
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.74
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E98.91
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E719.15
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F222.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E68.39
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F110.77
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E410.61
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E89.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.85
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A55.60
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.21
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.70
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.94
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H26.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.18
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.24
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.67
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I14.31
GP2+ M cell, pool3.CNhs13240.11847-124I23.23
Ileum epithelium, pool1.CNhs13199.10252-104B92.47
Ileum epithelium, pool2.CNhs13232.10253-104C11.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C84.21
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.18
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G614.76
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.89
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.32
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F75.10
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D87.05
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D97.91
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.59
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B76.26
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C27.41
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B88.35
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C39.53
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.52
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A28.72
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I99.43
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A110.76
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.34
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.87
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C312.75
Mouse Granule cells, donor2.CNhs12357.11731-123E310.05
Mouse Granule cells, donor3.CNhs12108.11636-122C712.68
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.07
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C77.65
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E77.91
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D28.53
Mouse Microglia, donor1.CNhs12629.11718-123C810.49
Mouse Microglia, donor2.CNhs12634.11736-123E810.37
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.26
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.24
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D99.04
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D517.45
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D211.64
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.42
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D610.11
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D313.21
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D412.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F411.44
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D810.94
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E412.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E58.44
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.42
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D615.62
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F611.67
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E112.49
Mouse Schwann, donor1.CNhs12507.11728-123D93.26
Mouse Schwann, donor2.CNhs12573.11746-123F93.55
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.77
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C47.48
Mouse hepatocyte, donor3.CNhs12615.11637-122C85.94
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.69
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.23
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I74.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.46
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.95
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.06
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G15.85
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.05
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G37.08
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.06
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D74.90
adrenal gland, embryo E14.CNhs11038.406-44C54.86
adrenal gland, embryo E16.CNhs11004.1254-43D66.39
adrenal gland, embryo E17.CNhs11043.1263-45I14.61
adrenal gland, embryo E18.CNhs11026.1262-18F56.48
adrenal gland, neonate N00.CNhs11191.1311-23C13.76
adrenal gland, neonate N25.CNhs11223.1377-27I35.53
amnion, adult pregnant day17.5.CNhs10488.583-22A83.46
aorta, adult.CNhs10498.46-23H14.19
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F55.01
bone (os femoris), neonate N16.CNhs11225.1525-43A62.65
bone (os femoris), neonate N20.CNhs11195.1350-25C34.85
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I23.98
colon, adult.CNhs10468.36-18H72.04
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.55
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D19.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D44.57
corpora quadrigemina, adult.CNhs10501.16-22A43.59
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F111.56
cortex, adult.CNhs10473.12-14D53.65
cortex, neonate N30.CNhs11107.1392-42F23.07
diencephalon, adult.CNhs10482.20-12F23.32
diencephalon, neonate N30.CNhs11201.1388-42B23.89
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.40
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.23
epididymis, adult.CNhs10490.58-23B23.54
eyeball, adult.CNhs10484.31-12G42.95
eyeball, embryo E12.CNhs11016.345-16C66.25
eyeball, embryo E14.CNhs10521.399-16E25.98
eyeball, embryo E15.CNhs10593.426-16C94.68
eyeball, embryo E17.CNhs11023.1261-18D45.27
eyeball, neonate N00.CNhs11207.633-15C65.78
eyeball, neonate N01.CNhs11140.1532-43E75.89
eyeball, neonate N02.CNhs11205.1551-44G86.09
eyeball, neonate N16.CNhs11188.777-19A24.92
forelimb, embryo E11.CNhs10596.335-25E24.53
forelimb, embryo E12.CNhs10600.359-14H24.54
forelimb, embryo E13.CNhs10589.384-1E25.63
forelimb, embryo E14.CNhs10577.413-26A88.55
forelimb, embryo E15.CNhs11007.437-20E76.12
forelimb, embryo E17.CNhs10598.1517-43C44.53
forelimb, embryo E18.CNhs11008.1520-43B55.76
gonad, embryo E13.CNhs11044.1564-45I65.97
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.92
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D26.18
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D54.83
heart, embryo E11.CNhs10586.331-24E93.52
heart, embryo E12.CNhs11015.353-12F55.39
heart, embryo E13.CNhs11013.376-3I96.84
heart, embryo E14.CNhs10597.403-26D45.21
heart, embryo E15.CNhs11017.431-16C85.71
heart, embryo E16.CNhs11021.457-17C64.78
heart, embryo E17.CNhs11025.479-18E53.26
heart, embryo E18.CNhs11030.1283-20G36.17
heart, neonate N00.CNhs11213.639-21E31.99
heart, neonate N03.CNhs11221.1349-25I23.78
heart, neonate N10.CNhs11118.749-24G13.28
heart, neonate N16.CNhs11209.782-15G11.78
heart, neonate N20.CNhs11127.821-26I62.05
heart, neonate N25.CNhs11196.1351-25D33.73
heart, neonate N30.CNhs11202.1390-42D22.15
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G18.34
intestinal mucosa, adult.CNhs10506.860-29I32.31
intestine, adult.CNhs10496.178-9A33.44
intestine, embryo E12.CNhs11019.1251-16I55.55
intestine, embryo E13.CNhs11010.381-16D55.81
intestine, embryo E15.CNhs10602.976-16D83.87
intestine, embryo E16.CNhs10585.463-22H42.62
intestine, embryo E17.CNhs10582.482-18D32.89
intestine, embryo E18.CNhs10526.1289-20F72.28
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E92.64
intestine, neonate N06.CNhs11102.688-20B82.01
intestine, neonate N07.CNhs11095.720-20F22.98
intestine, neonate N10.CNhs11098.755-23A53.70
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E34.32
intestine, neonate N30.CNhs11131.1384-42G12.19
kidney, embryo E14.CNhs10606.411-4I94.36
kidney, embryo E15.CNhs10997.434-16F85.60
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I24.89
kidney, embryo E18.CNhs11001.1288-20C76.01
kidney, neonate N00.CNhs11214.646-21G72.38
kidney, neonate N10.CNhs11206.758-6D52.15
kidney, neonate N20.CNhs11113.832-19I12.95
kidney, neonate N25.CNhs11122.1353-25F33.14
kidney, neonate N30.CNhs11203.1385-42H13.46
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F84.00
liver, embryo E13.CNhs10524.378-3H63.34
liver, embryo E14.CNhs10594.409-16E14.27
liver, embryo E15.CNhs10520.433-16D73.65
liver, embryo E16.CNhs10523.462-17F53.38
liver, embryo E17.CNhs10510.481-18A34.07
liver, embryo E18.CNhs10579.499-43G43.74
liver, neonate N00.CNhs11117.641-24F41.95
liver, neonate N03.CNhs11123.1345-25G22.75
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H22.98
liver, neonate N10.CNhs11115.751-24B93.12
liver, neonate N20.CNhs11220.823-25A31.77
liver, neonate N25.CNhs11198.1368-26H12.87
liver, neonate N30.CNhs11106.1382-42D13.86
lung, adult.CNhs10474.28-22B12.59
lung, embryo E12.CNhs10522.354-16G26.25
lung, embryo E14.CNhs10604.404-26F83.26
lung, embryo E15.CNhs11020.432-17C55.09
lung, embryo E16.CNhs10998.458-17B64.69
lung, embryo E17.CNhs10605.480-44A64.02
lung, embryo E18.CNhs10583.1287-20I62.14
lung, neonate N00.CNhs11224.640-42C64.29
lung, neonate N06.CNhs11212.683-20E53.00
lung, neonate N07.CNhs11111.715-19A33.54
lung, neonate N10.CNhs11219.750-23E64.15
lung, neonate N20.CNhs11109.822-18A42.13
lung, neonate N25.CNhs11119.1359-25C73.28
lung, neonate N30.CNhs11133.1394-42H24.05
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B65.90
mammary gland, adult pregnant day19.CNhs10476.588-5H24.41
medulla oblongata, adult.CNhs10477.17-12C22.57
medulla oblongata, neonate N30.CNhs11200.1396-42A33.75
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C75.74
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.54
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E18.20
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.86
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.66
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.74
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.68
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.66
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D48.50
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D56.43
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D66.32
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I73.41
ovary, embryo E18.CNhs11040.505-44H76.77
ovary, neonate N00.CNhs11217.1299-22I44.72
oviduct, adult pregnant day01.CNhs10500.988-6G66.60
pancreas, adult.CNhs10486.34-16E415.93
pancreas, embryo E14.CNhs11012.405-44F45.58
pancreas, embryo E15.CNhs11042.1556-45F24.84
pancreas, embryo E16.CNhs11003.460-26E55.66
pancreas, embryo E17.CNhs10599.1558-45G36.50
pancreas, embryo E18.CNhs10580.1535-43I76.15
pancreas, neonate N00.CNhs11105.645-26G94.65
pancreas, neonate N01.CNhs11138.1531-43D75.09
pancreas, neonate N02.CNhs11139.1539-43D84.63
pancreas, neonate N16.CNhs11136.787-43B67.58
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H513.41
pituitary gland, adult.CNhs10493.21-1G84.77
pituitary gland, embryo E12.CNhs11018.346-16E65.76
pituitary gland, embryo E13.CNhs11009.370-44C77.76
pituitary gland, embryo E14.CNhs11037.398-44A56.86
pituitary gland, embryo E15.CNhs10592.427-16B95.32
pituitary gland, embryo E16.CNhs11036.449-43F65.71
pituitary gland, embryo E17.CNhs11039.1265-44F56.42
pituitary gland, neonate N00.CNhs11190.1308-22E97.31
placenta, adult pregnant day10.CNhs10472.539-13I72.58
placenta, adult pregnant day17.CNhs10464.577-18G33.18
prostate, adult.CNhs10470.859-1F88.60
skin, adult.CNhs10492.30-1C33.46
skin, neonate N00.CNhs11124.650-25G43.55
skin, neonate N03.CNhs11215.662-22H33.80
skin, neonate N06.CNhs11097.693-20I53.58
skin, neonate N10.CNhs11108.762-6C43.28
small intestine, neonate N16.CNhs11114.790-21I14.66
spinal cord, adult.CNhs10505.24-13C93.52
spleen, adult.CNhs10465.25-2G22.22
spleen, embryo E16.CNhs11035.461-43C13.30
spleen, embryo E18.CNhs11011.1271-21F24.82
spleen, neonate N10.CNhs11116.752-24D13.39
spleen, neonate N20.CNhs11112.824-19H13.69
spleen, neonate N25.CNhs11099.1354-25G34.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.48
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.04
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E35.85
stomach, embryo E15.CNhs10603.1252-16G84.47
stomach, embryo E16.CNhs11022.459-17D45.62
stomach, embryo E17.CNhs11006.1035-18D56.69
stomach, embryo E18.CNhs10999.1286-20C66.77
stomach, neonate N03.CNhs11193.1340-24B83.10
stomach, neonate N07.CNhs11210.718-18A93.39
stomach, neonate N25.CNhs11104.1355-25E45.24
stomach, neonate N30.CNhs11134.1386-42I13.89
submandibular gland, adult.CNhs10469.59-29C110.56
testis, adult.CNhs10504.57-7G54.51
testis, embryo E13.CNhs11031.389-23F54.19
testis, embryo E15.CNhs11034.443-27C54.47
testis, embryo E16.CNhs11033.470-26G57.00
testis, embryo E17.CNhs11029.486-18I54.13
testis, embryo E18.CNhs11027.503-18G54.39
testis, neonate N00.CNhs11189.1300-22B73.76
testis, neonate N07.CNhs11222.726-26I44.43
testis, neonate N10.CNhs11204.763-44D94.19
testis, neonate N20.CNhs11110.839-18H33.14
testis, neonate N30.CNhs11130.1391-42E22.02
thymus, adult.CNhs10471.38-12B53.79
thymus, embryo E14.CNhs11041.402-44I44.46
thymus, embryo E15.CNhs11005.430-45I26.47
thymus, embryo E16.CNhs11002.456-26C54.16
thymus, embryo E17.CNhs10581.478-18C15.73
thymus, embryo E18.CNhs10595.1273-19G43.58
thymus, neonate N02.CNhs11181.1541-43F84.33
thymus, neonate N03.CNhs11137.2104-43C73.54
thymus, neonate N06.CNhs11197.681-26C44.24
thymus, neonate N07.CNhs11211.713-19D33.66
thymus, neonate N10.CNhs11194.748-24E44.03
thymus, neonate N20.CNhs11186.820-7A23.90
thymus, neonate N25.CNhs11125.1362-25G74.52
thymus, neonate N30.CNhs11132.1393-42G24.44
tongue, adult.CNhs10499.32-1B42.27
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.96
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.85
urinary bladder, adult.CNhs10481.879-12E45.22
uterus, adult pregnant day19.CNhs10497.590-15F54.50
uterus, adult.CNhs10509.92-27E54.76
vagina, adult.CNhs10502.89-27D52.79
vesicular gland, adult.CNhs10491.51-27F85.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.08
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.08
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.30
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.89
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I86.64
whole body, embryo E12.CNhs10587.857-27C93.59
whole body, embryo E13.CNhs10512.372-23H25.29
whole body, embryo E14.5.CNhs10578.420-27D26.81
whole body, embryo E14.CNhs10519.395-14B17.13
whole body, embryo E16.CNhs10514.453-14F26.62
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.10
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.31
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.96
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.97
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.54
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.21
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.63
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.69
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.40
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.77
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.57
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.84
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.51
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.60
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.97
whole body, embryo E17.5.CNhs10513.490-9F94.24
whole body, embryo E17.CNhs10517.475-3I56.50
whole body, embryo E18.CNhs10516.493-3B33.98
whole body, neonate N00.CNhs10525.657-19C24.94
whole body, neonate N01.CNhs10576.659-23C64.78
whole body, neonate N06.CNhs10515.692-21D15.29
whole body, neonate N10.CNhs10518.761-6B43.01





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell4.43e-1444
neurectodermal cell4.43e-1444
neural cell6.68e-1443
neuron2.82e-1333
neuronal stem cell2.82e-1333
neuroblast2.82e-1333
electrically signaling cell2.82e-1333
CNS neuron (sensu Vertebrata)4.24e-1223
neuroblast (sensu Vertebrata)4.24e-1223
somatic stem cell8.64e-1291
multi fate stem cell8.64e-1291
electrically responsive cell3.06e-1139
electrically active cell3.06e-1139
stem cell2.20e-0997
embryonic cell3.20e-0870

Uber anatomy
Ontology termp-valuen
central nervous system8.41e-1073
nervous system4.58e-0975
ectoderm-derived structure4.34e-0895
ectoderm4.34e-0895
presumptive ectoderm4.34e-0895
gray matter1.68e-0734
regional part of nervous system5.35e-0754
neurectoderm6.37e-0764
neural plate6.37e-0764
presumptive neural plate6.37e-0764
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