FFCP PHASE1:Mm9::chr9:110526854..110526862,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67169 | |EntrezGene=67169 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=714 | |||
|TSSclassifier=NA | |||
|UniProt=Q8CHQ4 | |UniProt=Q8CHQ4 | ||
|association_with_transcript=4bp_to_ENSMUST00000167247_5end | |association_with_transcript=4bp_to_ENSMUST00000167247_5end | ||
|cluster_id=chr9:110526854..110526862,- | |||
|description=CAGE_peak_2_at_Nradd_5end | |description=CAGE_peak_2_at_Nradd_5end | ||
|id=chr9:110526854..110526862,- | |id=chr9:110526854..110526862,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000680,3.63e-21,6;CL:0000187,3.63e-21,6;CL:0000056,3.63e-21,6;CL:0000222,3.82e-18,7;CL:0002494,3.97e-16,3;CL:0000737,3.97e-16,3;CL:0000746,3.97e-16,3;CL:0000513,3.97e-16,3;CL:0000355,4.17e-14,9;CL:0000128,2.18e-08,6;CL:0000126,2.18e-08,6;CL:0000127,2.18e-08,6;CL:0002293,4.27e-08,3;CL:0000192,1.39e-07,3;CL:0000359,1.39e-07,3;CL:0002539,1.39e-07,3;CL:0000514,1.39e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,4.17e-14,9;UBERON:0002036,4.17e-14,9;UBERON:0002385,4.17e-14,9;UBERON:0000486,4.17e-14,9;UBERON:0007503,4.17e-14,9;UBERON:0001015,4.17e-14,9;UBERON:0002329,4.17e-14,9;UBERON:0003082,4.17e-14,9;UBERON:0003059,4.17e-14,9;UBERON:0007282,4.17e-14,9;UBERON:0004290,4.17e-14,9;UBERON:0009618,4.17e-14,9;UBERON:0000383,1.09e-12,10;UBERON:0007524,1.57e-11,11;UBERON:0003077,1.57e-11,11;UBERON:0007285,1.57e-11,11;UBERON:0001135,1.39e-07,3;UBERON:0004237,1.39e-07,3;UBERON:0004695,1.39e-07,3;UBERON:0002111,1.39e-07,3;UBERON:0004178,1.39e-07,3 | |||
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| ||
|short_description=p2@Nradd | |short_description=p2@Nradd | ||
}} | }} |
Latest revision as of 05:41, 26 September 2015
Short description: | p2@Nradd |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Nradd_5end |
Coexpression cluster: | MCL_coexpression_mm9:714 |
Association with transcript: | 4bp_to_ENSMUST00000167247_5end |
EntrezGene: | Nradd |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 3.63e-21 | 6 |
muscle cell | 3.63e-21 | 6 |
myoblast | 3.63e-21 | 6 |
mesodermal cell | 3.82e-18 | 7 |
cardiocyte | 3.97e-16 | 3 |
striated muscle cell | 3.97e-16 | 3 |
cardiac muscle cell | 3.97e-16 | 3 |
cardiac muscle myoblast | 3.97e-16 | 3 |
multi-potent skeletal muscle stem cell | 4.17e-14 | 9 |
oligodendrocyte | 2.18e-08 | 6 |
macroglial cell | 2.18e-08 | 6 |
astrocyte | 2.18e-08 | 6 |
epithelial cell of thymus | 4.27e-08 | 3 |
smooth muscle cell | 1.39e-07 | 3 |
vascular associated smooth muscle cell | 1.39e-07 | 3 |
aortic smooth muscle cell | 1.39e-07 | 3 |
smooth muscle myoblast | 1.39e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 4.17e-14 | 9 |
striated muscle tissue | 4.17e-14 | 9 |
muscle tissue | 4.17e-14 | 9 |
multilaminar epithelium | 4.17e-14 | 9 |
epithelial vesicle | 4.17e-14 | 9 |
musculature | 4.17e-14 | 9 |
somite | 4.17e-14 | 9 |
myotome | 4.17e-14 | 9 |
presomitic mesoderm | 4.17e-14 | 9 |
presumptive segmental plate | 4.17e-14 | 9 |
dermomyotome | 4.17e-14 | 9 |
trunk paraxial mesoderm | 4.17e-14 | 9 |
musculature of body | 1.09e-12 | 10 |
dense mesenchyme tissue | 1.57e-11 | 11 |
paraxial mesoderm | 1.57e-11 | 11 |
presumptive paraxial mesoderm | 1.57e-11 | 11 |
smooth muscle tissue | 1.39e-07 | 3 |
blood vessel smooth muscle | 1.39e-07 | 3 |
arterial system smooth muscle | 1.39e-07 | 3 |
artery smooth muscle tissue | 1.39e-07 | 3 |
aorta smooth muscle tissue | 1.39e-07 | 3 |