FFCP PHASE1:Mm9::chr9:110526854..110526862,-: Difference between revisions
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{{FFCP|EntrezGene=67169|HGNC=|MCL_coexpression_id=714|UniProt=Q8CHQ4|association_with_transcript=4bp_to_ENSMUST00000167247_5end|description=CAGE_peak_2_at_Nradd_5end|id=chr9:110526854..110526862,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000680,3.63e-21,6;CL:0000187,3.63e-21,6;CL:0000056,3.63e-21,6;CL:0000222,3.82e-18,7;CL:0002494,3.97e-16,3;CL:0000737,3.97e-16,3;CL:0000746,3.97e-16,3;CL:0000513,3.97e-16,3;CL:0000355,4.17e-14,9;CL:0000128,2.18e-08,6;CL:0000126,2.18e-08,6;CL:0000127,2.18e-08,6;CL:0002293,4.27e-08,3;CL:0000192,1.39e-07,3;CL:0000359,1.39e-07,3;CL:0002539,1.39e-07,3;CL:0000514,1.39e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001134,4.17e-14,9;UBERON:0002036,4.17e-14,9;UBERON:0002385,4.17e-14,9;UBERON:0000486,4.17e-14,9;UBERON:0007503,4.17e-14,9;UBERON:0001015,4.17e-14,9;UBERON:0002329,4.17e-14,9;UBERON:0003082,4.17e-14,9;UBERON:0003059,4.17e-14,9;UBERON:0007282,4.17e-14,9;UBERON:0004290,4.17e-14,9;UBERON:0009618,4.17e-14,9;UBERON:0000383,1.09e-12,10;UBERON:0007524,1.57e-11,11;UBERON:0003077,1.57e-11,11;UBERON:0007285,1.57e-11,11;UBERON:0001135,1.39e-07,3;UBERON:0004237,1.39e-07,3;UBERON:0004695,1.39e-07,3;UBERON:0002111,1.39e-07,3;UBERON:0004178,1.39e-07,3|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0.886922042621219,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,0.709638518536602,1.65192076945513,3.12956537739216,0.436050312760893,0.219686182734472,0.777719596297134,1.53985063787899,1.43752564364972,0,0,0,2.82985379639542,1.71920063963254,1.03134418455488,0.202316460859598,0,0,4.40497891689872,0.889294796111139,0.449949858640699,1.97773272513395,0.7104801149461,0.299600110518405,0.768436610643109,0.103689612308478,0.135005938331691,0.210324961351382,0,0,0.122490799214954,0,0,0,0.127687338085188,0,0,0.274462930807229,0,0,0,0,0.294628585473668,0,0.559198337475902,0.832988126665025,0.151143120213571,0,0,0,0,0,0,0,3.74946709671727,1.29893002301434,4.24007489412408,0.14084341977668,2.56652954828636,2.54805239706646,0,0,0.253359865475099,0,0,0,0.148442139064825,0.173485326766136,0,0.461230994512117,0.150722640552623,0.117588707135705,0.251333182659351,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0.251308704225729,0,0,0,0,0.305518091550949,0.124406970610093,0.252722758433675,0,0.130120442962704,1.83921683546778,0.540186389416048,0.30140963567143,0.272145996605311,0.12811372028485,0.0937017245597288,0,0.215567992932842,0.756424320671277,0.175951124163949,0.43839146485515,0,0,0,0.398068533636986,0,0,0,0.207125772535502,0.703578179943289,0,0.23674473558521,0,0,0,0,0.116765342367169,0.329119699826961,0,0.0810688095458557,0.146199987425332,0,0,0,0,0,0,0.213288250535234,0.464473343720877,0,0,0,0.190225626112559,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0.569003702859245,0.114248512609729,1.1270773567308,0.610953983535943,0.387904974335251,0.210407459670956,0.189709611372772,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0.369506380333209,0.757965647081939,0.488894929326078,0.678980343100753,0.469380496577004,0.167506257441816,0.476087281772027,0.390267295715598,0.157635144106191,0.44292937929755,0.318909537314974,0.163863314715738,0.172684981865896,0.433947175744535,0,0,0,0,0,0,0.983609672260053,0.252470927204373,0.631016438832513,0.390438744296638,0,0,0.445597348164788,0,0.404810701674894,0.584511715822624,0.395287777946524,0,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0.604647113929502,0,0,0.307435147943927,0,0,0,0.316036757935816,0,0,0,0.720244376125241,0.258717367565509,0.428674070063185,0,0.356737635204141,0.329098041204242,0,0.23467170806371,0,0,0.16488625294148,0.484393280087717,0.603129249281559,0.358117032009409,0.492422699235184,0.291480836629851,0,0,0,0.185194527369712,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0.165458490457098,0.194451188344048,0.129159823477731,0.337912250981556,0.117357238645754,0.13020438484395,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0.226730383615211,0.221985953374065,0.0897138566094757,0.167884616364078,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0,0,0.183843508450014,0,0.206035057238894,0,0,0,0,0.37456602987953,0.512201219238954,0.229741875822453,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0.25384382367503,0,0.526139422875686,0.407412341537585,0.561142271657738,0.118635018124174,0.0985044823755635,0.409231043169689,0,0.578719832943424,0.249810577937946,0,0,0,0,0|short_description=p2@Nradd}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67169 | |||
|HGNC= | |||
|MCL_coexpression_id=714 | |||
|TSSclassifier=NA | |||
|UniProt=Q8CHQ4 | |||
|association_with_transcript=4bp_to_ENSMUST00000167247_5end | |||
|cluster_id=chr9:110526854..110526862,- | |||
|description=CAGE_peak_2_at_Nradd_5end | |||
|id=chr9:110526854..110526862,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,3.63e-21,6;CL:0000187,3.63e-21,6;CL:0000056,3.63e-21,6;CL:0000222,3.82e-18,7;CL:0002494,3.97e-16,3;CL:0000737,3.97e-16,3;CL:0000746,3.97e-16,3;CL:0000513,3.97e-16,3;CL:0000355,4.17e-14,9;CL:0000128,2.18e-08,6;CL:0000126,2.18e-08,6;CL:0000127,2.18e-08,6;CL:0002293,4.27e-08,3;CL:0000192,1.39e-07,3;CL:0000359,1.39e-07,3;CL:0002539,1.39e-07,3;CL:0000514,1.39e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,4.17e-14,9;UBERON:0002036,4.17e-14,9;UBERON:0002385,4.17e-14,9;UBERON:0000486,4.17e-14,9;UBERON:0007503,4.17e-14,9;UBERON:0001015,4.17e-14,9;UBERON:0002329,4.17e-14,9;UBERON:0003082,4.17e-14,9;UBERON:0003059,4.17e-14,9;UBERON:0007282,4.17e-14,9;UBERON:0004290,4.17e-14,9;UBERON:0009618,4.17e-14,9;UBERON:0000383,1.09e-12,10;UBERON:0007524,1.57e-11,11;UBERON:0003077,1.57e-11,11;UBERON:0007285,1.57e-11,11;UBERON:0001135,1.39e-07,3;UBERON:0004237,1.39e-07,3;UBERON:0004695,1.39e-07,3;UBERON:0002111,1.39e-07,3;UBERON:0004178,1.39e-07,3 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0.886922042621219,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,0.709638518536602,1.65192076945513,3.12956537739216,0.436050312760893,0.219686182734472,0.777719596297134,1.53985063787899,1.43752564364972,0,0,0,2.82985379639542,1.71920063963254,1.03134418455488,0.202316460859598,0,0,4.40497891689872,0.889294796111139,0.449949858640699,1.97773272513395,0.7104801149461,0.299600110518405,0.768436610643109,0.103689612308478,0.135005938331691,0.210324961351382,0,0,0.122490799214954,0,0,0,0.127687338085188,0,0,0.274462930807229,0,0,0,0,0.294628585473668,0,0.559198337475902,0.832988126665025,0.151143120213571,0,0,0,0,0,0,0,3.74946709671727,1.29893002301434,4.24007489412408,0.14084341977668,2.56652954828636,2.54805239706646,0,0,0.253359865475099,0,0,0,0.148442139064825,0.173485326766136,0,0.461230994512117,0.150722640552623,0.117588707135705,0.251333182659351,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0.251308704225729,0,0,0,0,0.305518091550949,0.124406970610093,0.252722758433675,0,0.130120442962704,1.83921683546778,0.540186389416048,0.30140963567143,0.272145996605311,0.12811372028485,0.0937017245597288,0,0.215567992932842,0.756424320671277,0.175951124163949,0.43839146485515,0,0,0,0.398068533636986,0,0,0,0.207125772535502,0.703578179943289,0,0.23674473558521,0,0,0,0,0.116765342367169,0.329119699826961,0,0.0810688095458557,0.146199987425332,0,0,0,0,0,0,0.213288250535234,0.464473343720877,0,0,0,0.190225626112559,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0.569003702859245,0.114248512609729,1.1270773567308,0.610953983535943,0.387904974335251,0.210407459670956,0.189709611372772,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0.369506380333209,0.757965647081939,0.488894929326078,0.678980343100753,0.469380496577004,0.167506257441816,0.476087281772027,0.390267295715598,0.157635144106191,0.44292937929755,0.318909537314974,0.163863314715738,0.172684981865896,0.433947175744535,0,0,0,0,0,0,0.983609672260053,0.252470927204373,0.631016438832513,0.390438744296638,0,0,0.445597348164788,0,0.404810701674894,0.584511715822624,0.395287777946524,0,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0.604647113929502,0,0,0.307435147943927,0,0,0,0.316036757935816,0,0,0,0.720244376125241,0.258717367565509,0.428674070063185,0,0.356737635204141,0.329098041204242,0,0.23467170806371,0,0,0.16488625294148,0.484393280087717,0.603129249281559,0.358117032009409,0.492422699235184,0.291480836629851,0,0,0,0.185194527369712,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0.165458490457098,0.194451188344048,0.129159823477731,0.337912250981556,0.117357238645754,0.13020438484395,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0.226730383615211,0.221985953374065,0.0897138566094757,0.167884616364078,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0,0,0.183843508450014,0,0.206035057238894,0,0,0,0,0.37456602987953,0.512201219238954,0.229741875822453,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0.25384382367503,0,0.526139422875686,0.407412341537585,0.561142271657738,0.118635018124174,0.0985044823755635,0.409231043169689,0,0.578719832943424,0.249810577937946,0,0,0,0,0 | |||
|short_description=p2@Nradd | |||
}} |
Latest revision as of 05:41, 26 September 2015
Short description: | p2@Nradd |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Nradd_5end |
Coexpression cluster: | MCL_coexpression_mm9:714 |
Association with transcript: | 4bp_to_ENSMUST00000167247_5end |
EntrezGene: | Nradd |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 3.63e-21 | 6 |
muscle cell | 3.63e-21 | 6 |
myoblast | 3.63e-21 | 6 |
mesodermal cell | 3.82e-18 | 7 |
cardiocyte | 3.97e-16 | 3 |
striated muscle cell | 3.97e-16 | 3 |
cardiac muscle cell | 3.97e-16 | 3 |
cardiac muscle myoblast | 3.97e-16 | 3 |
multi-potent skeletal muscle stem cell | 4.17e-14 | 9 |
oligodendrocyte | 2.18e-08 | 6 |
macroglial cell | 2.18e-08 | 6 |
astrocyte | 2.18e-08 | 6 |
epithelial cell of thymus | 4.27e-08 | 3 |
smooth muscle cell | 1.39e-07 | 3 |
vascular associated smooth muscle cell | 1.39e-07 | 3 |
aortic smooth muscle cell | 1.39e-07 | 3 |
smooth muscle myoblast | 1.39e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 4.17e-14 | 9 |
striated muscle tissue | 4.17e-14 | 9 |
muscle tissue | 4.17e-14 | 9 |
multilaminar epithelium | 4.17e-14 | 9 |
epithelial vesicle | 4.17e-14 | 9 |
musculature | 4.17e-14 | 9 |
somite | 4.17e-14 | 9 |
myotome | 4.17e-14 | 9 |
presomitic mesoderm | 4.17e-14 | 9 |
presumptive segmental plate | 4.17e-14 | 9 |
dermomyotome | 4.17e-14 | 9 |
trunk paraxial mesoderm | 4.17e-14 | 9 |
musculature of body | 1.09e-12 | 10 |
dense mesenchyme tissue | 1.57e-11 | 11 |
paraxial mesoderm | 1.57e-11 | 11 |
presumptive paraxial mesoderm | 1.57e-11 | 11 |
smooth muscle tissue | 1.39e-07 | 3 |
blood vessel smooth muscle | 1.39e-07 | 3 |
arterial system smooth muscle | 1.39e-07 | 3 |
artery smooth muscle tissue | 1.39e-07 | 3 |
aorta smooth muscle tissue | 1.39e-07 | 3 |