FFCP PHASE1:Mm9::chr9:119311274..119311343,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:119311274..119311343,+
|short_description=p2@Acvr2b
|description=CAGE_peak_2_at_Acvr2b_5end
|association_with_transcript=-218bp_to_ENSMUST00000035093,ENSMU...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=11481 | |EntrezGene=11481 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3698 | |||
|TSSclassifier=NA | |||
|UniProt=P27040 | |UniProt=P27040 | ||
|association_with_transcript=-218bp_to_ENSMUST00000035093,ENSMUST00000111699_5end | |||
|cluster_id=chr9:119311274..119311343,+ | |||
|description=CAGE_peak_2_at_Acvr2b_5end | |||
|id=chr9:119311274..119311343,+ | |||
|ontology_enrichment_celltype=CL:0000540!2.04e-12!33;CL:0000047!2.04e-12!33;CL:0000031!2.04e-12!33;CL:0000404!2.04e-12!33;CL:0000117!1.90e-10!23;CL:0000337!1.90e-10!23;CL:0000393!3.37e-08!39;CL:0000211!3.37e-08!39;CL:0000221!6.37e-08!44;CL:0000133!6.37e-08!44;CL:0002319!1.39e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.65e-13,33;CL:0000047,2.65e-13,33;CL:0000031,2.65e-13,33;CL:0000404,2.65e-13,33;CL:0000117,3.57e-11,23;CL:0000337,3.57e-11,23;CL:0000393,7.86e-09,39;CL:0000211,7.86e-09,39;CL:0000221,2.69e-08,44;CL:0000133,2.69e-08,44;CL:0002319,6.24e-08,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!4.19e-11!71;UBERON:0003075!4.19e-11!71;UBERON:0007284!4.19e-11!71;UBERON:0004121!1.10e-10!102;UBERON:0000924!1.10e-10!102;UBERON:0006601!1.10e-10!102;UBERON:0001017!3.40e-10!73;UBERON:0005743!3.40e-10!73;UBERON:0000073!3.33e-09!75;UBERON:0001016!3.33e-09!75;UBERON:0000033!3.59e-09!63;UBERON:0003056!4.57e-09!49;UBERON:0001049!1.44e-07!52;UBERON:0005068!1.44e-07!52;UBERON:0006241!1.44e-07!52;UBERON:0007135!1.44e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.43e-11,64;UBERON:0003075,1.43e-11,64;UBERON:0007284,1.43e-11,64;UBERON:0010314,9.79e-11,92;UBERON:0004121,1.61e-10,95;UBERON:0000924,1.61e-10,95;UBERON:0006601,1.61e-10,95;UBERON:0001017,2.14e-10,73;UBERON:0010371,5.76e-10,73;UBERON:0001016,1.66e-09,75;UBERON:0003056,3.34e-09,49;UBERON:0001049,1.53e-07,52;UBERON:0005068,1.53e-07,52;UBERON:0006241,1.53e-07,52;UBERON:0007135,1.53e-07,52;UBERON:0000073,1.64e-07,54 | |||
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| 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| ||
|short_description=p2@Acvr2b | |||
}} | }} |
Latest revision as of 07:51, 26 September 2015
Short description: | p2@Acvr2b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Acvr2b_5end |
Coexpression cluster: | MCL_coexpression_mm9:3698 |
Association with transcript: | -218bp_to_ENSMUST00000035093, ENSMUST00000111699_5end |
EntrezGene: | Acvr2b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.65e-13 | 33 |
neuronal stem cell | 2.65e-13 | 33 |
neuroblast | 2.65e-13 | 33 |
electrically signaling cell | 2.65e-13 | 33 |
CNS neuron (sensu Vertebrata) | 3.57e-11 | 23 |
neuroblast (sensu Vertebrata) | 3.57e-11 | 23 |
electrically responsive cell | 7.86e-09 | 39 |
electrically active cell | 7.86e-09 | 39 |
ectodermal cell | 2.69e-08 | 44 |
neurectodermal cell | 2.69e-08 | 44 |
neural cell | 6.24e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 1.43e-11 | 64 |
neural plate | 1.43e-11 | 64 |
presumptive neural plate | 1.43e-11 | 64 |
structure with developmental contribution from neural crest | 9.79e-11 | 92 |
ectoderm-derived structure | 1.61e-10 | 95 |
ectoderm | 1.61e-10 | 95 |
presumptive ectoderm | 1.61e-10 | 95 |
central nervous system | 2.14e-10 | 73 |
ecto-epithelium | 5.76e-10 | 73 |
nervous system | 1.66e-09 | 75 |
pre-chordal neural plate | 3.34e-09 | 49 |
neural tube | 1.53e-07 | 52 |
neural rod | 1.53e-07 | 52 |
future spinal cord | 1.53e-07 | 52 |
neural keel | 1.53e-07 | 52 |
regional part of nervous system | 1.64e-07 | 54 |