FFCP PHASE1:Mm9::chr17:34404939..34404950,+: Difference between revisions
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|id=chr17:34404939..34404950,+
|short_description=p11@H2-Ab1
|description=CAGE_peak_11_at_H2-Ab1_5end
|association_with_transcript=-264bp_to_ENSMUST00000174875_5end...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=14961 | |EntrezGene=14961 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=829 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-264bp_to_ENSMUST00000174875_5end | |||
|cluster_id=chr17:34404939..34404950,+ | |||
|description=CAGE_peak_11_at_H2-Ab1_5end | |||
|id=chr17:34404939..34404950,+ | |||
|ontology_enrichment_celltype=CL:0000839!5.07e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002476,1.40e-22,2;CL:0000839,2.88e-21,13;CL:0000763,2.41e-17,16;CL:0000553,3.20e-17,6;CL:0000556,3.20e-17,6;CL:0002031,5.87e-16,25;CL:0000049,1.18e-14,19;CL:0000945,1.20e-12,1;CL:0000236,1.20e-12,1;CL:0000826,1.20e-12,1;CL:0000988,1.71e-12,32;CL:0002032,1.71e-12,32;CL:0000037,1.71e-12,32;CL:0000837,1.71e-12,32;CL:0002194,8.11e-12,4;CL:0000766,8.11e-12,4;CL:0000234,8.11e-12,4;CL:0000576,8.11e-12,4;CL:0000235,8.11e-12,4;CL:0000864,8.11e-12,4;CL:0002009,8.11e-12,4;CL:0000040,8.11e-12,4;CL:0000559,8.11e-12,4;CL:0000050,1.01e-11,9;CL:0002320,1.05e-08,46;CL:0000134,1.05e-08,46;CL:0000219,2.06e-07,54;CL:0000473,3.77e-07,7;CL:0000557,3.77e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.47e-21!48;UBERON:0002390!2.30e-17!45;UBERON:0003061!2.30e-17!45;UBERON:0002405!1.61e-13!70;UBERON:0004177!4.33e-11!29;UBERON:0003408!1.85e-10!24;UBERON:0002370!3.18e-09!23;UBERON:0000974!3.18e-09!23;UBERON:0004807!3.18e-09!23;UBERON:0005058!3.18e-09!23;UBERON:0003351!3.18e-09!23;UBERON:0009113!3.18e-09!23;UBERON:0003295!3.18e-09!23;UBERON:0009722!3.18e-09!23;UBERON:0005562!3.18e-09!23;UBERON:0007690!3.18e-09!23;UBERON:0006562!1.01e-08!24;UBERON:0001557!1.01e-08!24;UBERON:0001042!1.01e-08!24;UBERON:0008814!1.01e-08!24;UBERON:0009145!1.01e-08!24;UBERON:0003081!3.03e-08!88;UBERON:0001004!1.37e-07!42;UBERON:0000072!1.91e-07!27;UBERON:0002371!3.93e-07!16;UBERON:0001007!4.04e-07!128;UBERON:0001555!4.04e-07!128;UBERON:0007026!4.04e-07!128;UBERON:0004119!6.82e-07!130;UBERON:0000925!6.82e-07!130;UBERON:0006595!6.82e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.41e-17,16;UBERON:0001474,1.08e-12,22;UBERON:0004765,1.08e-12,22;UBERON:0001434,1.08e-12,22;UBERON:0000029,5.53e-12,1;UBERON:0001097,5.53e-12,1;UBERON:0003968,5.53e-12,1;UBERON:0001467,5.53e-12,1;UBERON:0002204,8.62e-09,32;UBERON:0002384,1.05e-08,46;UBERON:0002193,2.92e-08,48;UBERON:0002405,2.92e-08,48 | |||
|phase1_expression=0,0,0.454999239389536,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0.607425802169478,0,3.78554598429885,1.7824876368746,2.12194825899015,0,0,0,0.159992422793407,0.22940928106717,0,0,0,1.33016393619462,0,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.20126078778983,0,0,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.29468941823586,0.148442139064825,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0.766371165625774,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.345369963731791,0,3.01582567878545,1.08781136763742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.16488625294148,0,0,0,0,0.582961673259701,0,0.854354403989263,0,0,0,0.27338845544205,0.228778173206523,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.405450430580328,0.308132871494482,0.129920822977795,0.179026695667481,0.198681354781265,0.120195449519969,0.147689527174577,0.201932899896295,0.0762068066549998,0.100826185136841,0.0974578807397524,0.288635524920988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0.454999239389536,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0.607425802169478,0,3.78554598429885,1.7824876368746,2.12194825899015,0,0,0,0.159992422793407,0.22940928106717,0,0,0,1.33016393619462,0,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.20126078778983,0,0,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.29468941823586,0.148442139064825,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0.766371165625774,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.345369963731791,0,3.01582567878545,1.08781136763742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.16488625294148,0,0,0,0,0.582961673259701,0,0.854354403989263,0,0,0,0.27338845544205,0.228778173206523,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.405450430580328,0.308132871494482,0.129920822977795,0.179026695667481,0.198681354781265,0.120195449519969,0.147689527174577,0.201932899896295,0.0762068066549998,0.100826185136841,0.0974578807397524,0.288635524920988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p11@H2-Ab1 | |||
}} | }} |
Latest revision as of 07:54, 26 September 2015
Short description: | p11@H2-Ab1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_H2-Ab1_5end |
Coexpression cluster: | MCL_coexpression_mm9:829 |
Association with transcript: | -264bp_to_ENSMUST00000174875_5end |
EntrezGene: | H2-Ab1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow macrophage | 1.40e-22 | 2 |
myeloid lineage restricted progenitor cell | 2.88e-21 | 13 |
myeloid cell | 2.41e-17 | 16 |
megakaryocyte progenitor cell | 3.20e-17 | 6 |
megakaryocyte | 3.20e-17 | 6 |
hematopoietic lineage restricted progenitor cell | 5.87e-16 | 25 |
common myeloid progenitor | 1.18e-14 | 19 |
lymphocyte of B lineage | 1.20e-12 | 1 |
B cell | 1.20e-12 | 1 |
pro-B cell | 1.20e-12 | 1 |
hematopoietic cell | 1.71e-12 | 32 |
hematopoietic oligopotent progenitor cell | 1.71e-12 | 32 |
hematopoietic stem cell | 1.71e-12 | 32 |
hematopoietic multipotent progenitor cell | 1.71e-12 | 32 |
monopoietic cell | 8.11e-12 | 4 |
myeloid leukocyte | 8.11e-12 | 4 |
phagocyte | 8.11e-12 | 4 |
monocyte | 8.11e-12 | 4 |
macrophage | 8.11e-12 | 4 |
tissue-resident macrophage | 8.11e-12 | 4 |
macrophage dendritic cell progenitor | 8.11e-12 | 4 |
monoblast | 8.11e-12 | 4 |
promonocyte | 8.11e-12 | 4 |
megakaryocyte-erythroid progenitor cell | 1.01e-11 | 9 |
connective tissue cell | 1.05e-08 | 46 |
mesenchymal cell | 1.05e-08 | 46 |
motile cell | 2.06e-07 | 54 |
defensive cell | 3.77e-07 | 7 |
granulocyte monocyte progenitor cell | 3.77e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.41e-17 | 16 |
bone element | 1.08e-12 | 22 |
skeletal element | 1.08e-12 | 22 |
skeletal system | 1.08e-12 | 22 |
lymph node | 5.53e-12 | 1 |
axillary lymph node | 5.53e-12 | 1 |
peripheral lymph node | 5.53e-12 | 1 |
shoulder | 5.53e-12 | 1 |
musculoskeletal system | 8.62e-09 | 32 |
connective tissue | 1.05e-08 | 46 |
hemolymphoid system | 2.92e-08 | 48 |
immune system | 2.92e-08 | 48 |