FFCP PHASE1:Mm9::chr9:15110696..15110712,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr9:15110696..15110712,+ to FFCP PHASE1:Mm9::chr9:15110696..15110712,+: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=75316 | |EntrezGene=75316 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=101 | |||
|TSSclassifier=NA | |||
|UniProt=Q9D4V4 | |UniProt=Q9D4V4 | ||
|association_with_transcript=0bp_to_ENSMUST00000171167_5end | |||
|cluster_id=chr9:15110696..15110712,+ | |||
|description=CAGE_peak_1_at_Taf1d_5end | |||
|id=chr9:15110696..15110712,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.68e-10!32;CL:0002032!1.68e-10!32;CL:0000037!1.68e-10!32;CL:0000566!1.68e-10!32;CL:0000837!1.68e-10!32;CL:0000542!4.10e-09!13;CL:0000051!4.10e-09!13;CL:0000838!5.73e-09!12;CL:0000084!2.68e-08!11;CL:0000827!2.68e-08!11;CL:0002031!9.43e-08!25;CL:0000791!1.95e-07!9;CL:0000789!1.95e-07!9;CL:0002420!1.95e-07!9;CL:0002419!1.95e-07!9;CL:0000790!1.95e-07!9;CL:0000624!9.33e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.68e-10,32;CL:0002032,1.68e-10,32;CL:0000037,1.68e-10,32;CL:0000837,1.68e-10,32;CL:0000542,4.10e-09,13;CL:0000051,4.10e-09,13;CL:0000838,5.73e-09,12;CL:0000084,2.68e-08,11;CL:0000827,2.68e-08,11;CL:0002031,9.43e-08,25;CL:0000791,1.95e-07,9;CL:0000789,1.95e-07,9;CL:0002420,1.95e-07,9;CL:0002419,1.95e-07,9;CL:0000790,1.95e-07,9;CL:0000624,9.33e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000072!2.05e-07!27;UBERON:0003408!2.17e-07!24;UBERON:0002370!2.62e-07!23;UBERON:0000974!2.62e-07!23;UBERON:0004807!2.62e-07!23;UBERON:0005058!2.62e-07!23;UBERON:0003351!2.62e-07!23;UBERON:0009113!2.62e-07!23;UBERON:0003295!2.62e-07!23;UBERON:0009722!2.62e-07!23;UBERON:0005562!2.62e-07!23;UBERON:0007690!2.62e-07!23;UBERON:0006562!6.80e-07!24;UBERON:0001557!6.80e-07!24;UBERON:0001042!6.80e-07!24;UBERON:0008814!6.80e-07!24;UBERON:0009145!6.80e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000072,2.05e-07,27;UBERON:0003408,2.17e-07,24;UBERON:0002370,2.62e-07,23;UBERON:0000974,2.62e-07,23;UBERON:0004807,2.62e-07,23;UBERON:0005058,2.62e-07,23;UBERON:0003351,2.62e-07,23;UBERON:0009113,2.62e-07,23;UBERON:0003295,2.62e-07,23;UBERON:0009722,2.62e-07,23;UBERON:0005562,2.62e-07,23;UBERON:0007690,2.62e-07,23;UBERON:0006562,6.80e-07,24;UBERON:0001557,6.80e-07,24;UBERON:0001042,6.80e-07,24;UBERON:0008814,6.80e-07,24;UBERON:0009145,6.80e-07,24 | |||
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|phase1_expression=11.0502704502308,17.7977457896074,15.9249733786338,47.7893453864791,58.6048004037226,24.6782529710478,40.6485994636215,50.7454661125395,150.784721424435,151.673813056652,124.133026963491,92.9345652295669,68.4802919724823,59.0961920352422,26.9818907070687,36.6480233975585,27.9824751251259,54.1017613589378,50.3209971333061,42.8633548316011,10.7154545590348,35.9433243347205,59.5535519236773,25.5987876469451,21.1056538581796,12.6331032105304,15.0766698655676,17.0222273821852,21.6626698180266,16.1299283046356,22.3947815761858,33.6566256933605,36.9038872550742,31.6963362030877,37.2618589479144,23.7715542862644,35.933806702177,12.9744805528441,17.1893775795236,17.7998072951091,11.7646297606203,14.3439551841274,10.6812277666854,12.211991343631,14.6996550268296,21.4749700029167,7.82391344348039,2.39827672018491,2.85592037554813,6.02732687130279,3.63964696225943,2.87505128729943,85.4013464833878,73.9869384851571,101.836421140167,16.7218633423366,12.8940047972441,11.3447860301037,4.04632921719196,4.7609188134483,3.1691570175309,6.09920157724438,0.889294796111139,3.5995988691256,1.97773272513395,3.5524005747305,1.79760066311043,2.68952813725088,8.91730665852908,4.05017814995072,5.8890989178387,2.28520787523043,3.97563373712904,8.20688354740192,6.61333750025831,2.75765635983006,2.20231761998777,5.61824287574826,4.91540906419979,5.40733779693795,5.6722339033494,6.25096044668112,3.62937898701795,5.6276261003168,7.33431589328689,10.0173719061047,13.9524247183121,8.94717339961443,37.7873704732588,27.5080478788699,63.4803230256674,24.0918685554788,36.0384806865108,8.09554787456726,14.2950811838487,15.2329141613094,13.6231087527799,16.1908806449155,17.1458763037893,18.726997449048,8.45060518660083,19.2489716121477,20.3844191765317,28.4426681261332,29.2262905365139,30.909903587962,33.3646133709757,15.186456002635,56.7073965187306,18.4068252440383,19.4303565978072,12.4830846107978,13.6063143381075,14.0172055713939,22.694620477191,11.1843266283411,17.3036477414062,22.7020990364261,13.2691582792481,22.9708926925321,24.9550915860245,23.2740121504907,24.2309289583559,12.0040126774734,9.63454851341893,24.0129631896076,37.7417642193649,52.7914403274199,29.0990819997318,8.38827580667007,8.23501085073528,14.827213549318,6.43149984711423,6.64860189058859,8.3115217823824,8.11206315338788,25.4598409625791,18.9098595327341,14.4051972307195,15.1518136238261,27.1951725792051,32.4161967251197,34.3918667928217,20.7972648613287,21.7036432292736,21.0106501267154,16.4915035225123,14.2286853906459,23.0657752438141,46.8983078816192,40.4687585577082,32.6601641317086,24.190110682627,31.6909471535172,25.311202778177,33.6367910923253,37.9195121149147,59.9620623577286,44.613669405108,28.1691050648283,19.2311369184499,23.768192112854,28.6461130058104,25.1858216636677,21.2888615784582,22.0907247512887,16.6329508867764,18.3321587516456,16.1268652915211,12.4767272700112,9.56611952641098,7.60239934611728,7.24515380460467,8.45500438190342,9.2527577368216,17.9054025539955,17.1817767151575,29.3540128996534,33.2729670834965,35.996684138368,43.0417320815792,31.8659968904881,30.2434139629024,21.8759470029443,17.0830462156024,15.9757986082291,15.3314477368164,14.1259095149217,14.4273424468149,27.8634016682809,17.9394581395996,20.9098336917086,14.9837641752935,31.0755954298462,38.3206301288473,29.5294425375706,24.6319658702885,24.7579444212825,21.6901322336203,16.2371162777562,12.4028994994686,11.9695249004147,16.8977997439675,43.3797274861845,35.1840601252633,44.522698252201,25.3575151735629,23.8765388154893,19.6061905871693,23.5910832709665,27.400853324981,16.1991233780968,17.2521847832825,17.1184835927512,18.4102227137591,13.639259409144,9.86685774370517,9.16642690590398,13.8564892624954,35.2454025893102,44.9783334979991,25.6315079520534,26.0506175600237,31.826188913945,24.7565386521454,25.3673742215138,20.650203877911,14.8381342064679,18.337298395611,11.7981586595331,12.6060036762104,14.6095549167327,21.1107797514981,17.4049818821987,49.1764273019036,63.4654516500885,8.34863067936518,7.61875962849321,12.131185957874,10.3513080153793,36.914461671702,38.2629969410706,26.9279247165999,40.8636644498864,36.3161838754302,34.2522602254487,34.0040989406911,28.6410740753086,33.204173347508,15.1021018718249,29.3815976381116,9.61554259803178,28.3423309275222,25.9003093066881,30.5313818181915,26.220308704738,37.4881210636291,25.6502908468021,10.6308681437078,37.1996529012152,35.1462478708781,33.081569382453,34.2237483249332,44.5611828689501,17.9211634577498,36.0974401368654,17.3624198934432,22.5076367539138,6.20921682157222,13.5032332069903,28.1970971491215,16.2315624017884,14.4803138129866,8.82948352432338,25.3445444708807,12.7099242518292,11.688005096913,29.6795255294664,25.8343082713449,39.1430882783731,21.9645112965771,23.4721486635438,22.1525435838687,8.34413859047294,23.4093106693058,24.3536504196603,24.8160666675414,27.5017947226849,25.5618205838317,21.9627046278262,36.375384018685,41.9854356970974,35.9319931891502,23.8667654503778,45.0778790853118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|short_description=p1@Taf1d | |||
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Latest revision as of 10:20, 26 September 2015
Short description: | p1@Taf1d |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Taf1d_5end |
Coexpression cluster: | MCL_coexpression_mm9:101 |
Association with transcript: | 0bp_to_ENSMUST00000171167_5end |
EntrezGene: | Taf1d |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.68e-10 | 32 |
hematopoietic oligopotent progenitor cell | 1.68e-10 | 32 |
hematopoietic stem cell | 1.68e-10 | 32 |
hematopoietic multipotent progenitor cell | 1.68e-10 | 32 |
lymphocyte | 4.10e-09 | 13 |
common lymphoid progenitor | 4.10e-09 | 13 |
lymphoid lineage restricted progenitor cell | 5.73e-09 | 12 |
T cell | 2.68e-08 | 11 |
pro-T cell | 2.68e-08 | 11 |
hematopoietic lineage restricted progenitor cell | 9.43e-08 | 25 |
mature alpha-beta T cell | 1.95e-07 | 9 |
alpha-beta T cell | 1.95e-07 | 9 |
immature T cell | 1.95e-07 | 9 |
mature T cell | 1.95e-07 | 9 |
immature alpha-beta T cell | 1.95e-07 | 9 |
CD4-positive, alpha-beta T cell | 9.33e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
segment of respiratory tract | 2.05e-07 | 27 |
gland of gut | 2.17e-07 | 24 |
thymus | 2.62e-07 | 23 |
neck | 2.62e-07 | 23 |
respiratory system epithelium | 2.62e-07 | 23 |
hemolymphoid system gland | 2.62e-07 | 23 |
pharyngeal epithelium | 2.62e-07 | 23 |
thymic region | 2.62e-07 | 23 |
pharyngeal gland | 2.62e-07 | 23 |
entire pharyngeal arch endoderm | 2.62e-07 | 23 |
thymus primordium | 2.62e-07 | 23 |
early pharyngeal endoderm | 2.62e-07 | 23 |
pharynx | 6.80e-07 | 24 |
upper respiratory tract | 6.80e-07 | 24 |
chordate pharynx | 6.80e-07 | 24 |
pharyngeal arch system | 6.80e-07 | 24 |
pharyngeal region of foregut | 6.80e-07 | 24 |