FFCP PHASE1:Mm9::chr4:134052780..134052824,+: Difference between revisions
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{{FFCP|EntrezGene=71904|HGNC=|UniProt=D3YZW6,D3Z7K5|association_with_transcript=-65bp_to_ENSMUST00000134506,ENSMUST00000136171_5end|description=CAGE_peak_3_at_Paqr7_5end|id=chr4:134052780..134052824,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000025!7.63e-09!114;UBERON:0001017!2.28e-08!73;UBERON:0005743!2.28e-08!73;UBERON:0000073!3.93e-08!75;UBERON:0001016!3.93e-08!75;UBERON:0001049!1.78e-07!52;UBERON:0005068!1.78e-07!52;UBERON:0006241!1.78e-07!52;UBERON:0007135!1.78e-07!52;UBERON:0004111!6.69e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.84e-09,73;UBERON:0000073,9.80e-09,54;UBERON:0000025,1.13e-08,114;UBERON:0001016,3.59e-08,75;UBERON:0001049,1.30e-07,52;UBERON:0005068,1.30e-07,52;UBERON:0006241,1.30e-07,52;UBERON:0007135,1.30e-07,52;UBERON:0003076,2.01e-07,12;UBERON:0003057,2.01e-07,12;UBERON:0010314,3.85e-07,92;UBERON:0004111,4.78e-07,122|phase1_expression=0.160148847104794,3.48975407639361,6.3699893514535,0.90739263392049,2.00358291978539,1.84667199103079,2.56973904655078,1.03298658753261,0,0,0,0.239316476986009,1.71200729931206,2.27293046289393,0.333109761815663,0.809901069559304,0.699561878128147,0.473193248037357,0.411343300817216,0,3.40173160604279,2.97872853602656,4.4403964153619,3.51983330145495,2.52350209173887,3.44539178469012,3.87685796543167,2.15471232685889,0,0,0.665191531965914,1.27006134691926,1.23012957516914,15.8481681015439,0.288851619751275,0,0,14.2300754450549,4.6880120671428,6.28228492768558,8.2352408324342,8.19654581950135,7.2826552954673,0.251793635951155,0.202753862439029,0.367093504323363,3.12956537739216,1.30815093828268,1.75748946187577,0.194429899074283,2.37976916763116,7.18762821824858,0,0,0.336093799142464,10.0331180054019,6.01720223871389,6.18806510732931,1.21389876515759,3.1739458756322,3.80298842103708,0.677689064138264,2.66788438833342,20.6976934974722,21.7550599764734,19.1829631035447,9.28760342607055,11.9107674649682,0.414758449233911,0.405017814995072,0.420649922702764,9.99778445413313,8.61387309711293,0.61245399607477,0.287536413054709,0,25.3266526298594,14.6840438797966,15.0534402591119,1.45074916503213,2.92760459527711,2.08365348222704,16.1926139420801,15.1945904708554,16.3494125121187,3.53554302568401,4.6982654663704,3.72798891650601,0.984440513331393,0.68014404096107,1.73918693221007,3.44169550792555,0.679971333707751,0.539703191637817,1.94932925234301,0.448026887097336,1.96622188184453,1.53387290320252,2.07828803682295,2.12003744706204,0.281686839553361,3.84979432242953,0,0,0.432982082022428,0.253359865475099,1.01104889002957,1.82694207550496,0.258937883647172,1.7813056687779,0.867426633830679,1.52232739156071,2.30615497256059,0.904335843315735,1.41106448562846,1.63366568728578,1.48316980640624,0.289198713839823,0.884610551949874,0.485300549842228,1.32504911076236,0.969750506270444,0,5.85561594023094,6.70229461803056,1.53274233125155,4.19352935770721,2.99951365496704,4.19331749341113,11.0845073159569,1.83000241127451,1.7591609295801,3.12883776346098,4.34716277461562,9.97382613885888,7.62533936418461,0.407357455401265,1.49288364732112,0,3.78795340595653,0.130120442962704,0.459804208866946,0.180062129805349,0.30140963567143,0.95251098811859,0.896796041993948,0.187403449119458,2.06962696591213,0,0.378212160335639,0.175951124163949,0,0,0,0,0.59710280045548,4.91549231119264,2.31613116403244,7.10408748488982,2.07125772535502,0.469052119962192,1.44049649168812,1.89395788468168,1.96764231747404,1.3884040159864,1.62773761325285,1.3413670069981,1.98501082024188,1.6455984991348,1.14917224855367,2.59420190546738,2.77779976108131,2.19550115291051,2.14730270016595,2.94405927989778,2.05809224758569,0,2.11560453330835,0.426576501070468,0,0.128867461322093,0.80673409849337,0.667134131534611,1.52180500890047,2.84717436926707,3.12928013975621,2.5133520880027,2.98434708061726,3.70431765526328,1.79763881730844,0.432276099749388,1.59313018603494,0,0,0,0,0.387904974335251,0.280543279561274,0.758838445491087,1.91893192373483,1.72698600625512,2.09775178667061,2.96452627087149,0.83422552858047,0.589676985339609,1.79889689907883,0.608580364165509,0.241177159752417,1.52775511068852,0.863088412352432,3.24270453550071,2.47105271869273,1.43768206527355,1.11642284300551,2.80833905803104,1.01031551178845,1.61457672169721,2.41221760681684,2.77129785249907,0.568474235311454,0,0.339490171550376,0.469380496577004,0.502518772325447,1.19021820443007,2.73187107000918,2.04925687338048,1.55025282754142,1.11618338060241,5.89907932976657,3.45369963731791,3.61622646453779,9.04747703635634,14.6854534631052,0,0,11.2385412991454,9.02529986759964,0,1.00988370881749,1.89304931649754,0.780877488593277,0.215423397732799,0,2.00518806674155,0.849229592366497,0,0.876767573733936,0,1.60660658210904,1.56134093729095,0.712262414669021,0.488660878060728,1.15479086080775,0,0.242780636154981,0.604647113929502,0.188605079755898,0,0.922305443831782,1.29214146584111,0.363533729477506,0.7129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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=71904 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=D3YZW6,D3Z7K5 | |||
|association_with_transcript=-65bp_to_ENSMUST00000134506,ENSMUST00000136171_5end | |||
|cluster_id=chr4:134052780..134052824,+ | |||
|description=CAGE_peak_3_at_Paqr7_5end | |||
|id=chr4:134052780..134052824,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!7.63e-09!114;UBERON:0001017!2.28e-08!73;UBERON:0005743!2.28e-08!73;UBERON:0000073!3.93e-08!75;UBERON:0001016!3.93e-08!75;UBERON:0001049!1.78e-07!52;UBERON:0005068!1.78e-07!52;UBERON:0006241!1.78e-07!52;UBERON:0007135!1.78e-07!52;UBERON:0004111!6.69e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.84e-09,73;UBERON:0000073,9.80e-09,54;UBERON:0000025,1.13e-08,114;UBERON:0001016,3.59e-08,75;UBERON:0001049,1.30e-07,52;UBERON:0005068,1.30e-07,52;UBERON:0006241,1.30e-07,52;UBERON:0007135,1.30e-07,52;UBERON:0003076,2.01e-07,12;UBERON:0003057,2.01e-07,12;UBERON:0010314,3.85e-07,92;UBERON:0004111,4.78e-07,122 | |||
|phase1_expression=0.160148847104794,3.48975407639361,6.3699893514535,0.90739263392049,2.00358291978539,1.84667199103079,2.56973904655078,1.03298658753261,0,0,0,0.239316476986009,1.71200729931206,2.27293046289393,0.333109761815663,0.809901069559304,0.699561878128147,0.473193248037357,0.411343300817216,0,3.40173160604279,2.97872853602656,4.4403964153619,3.51983330145495,2.52350209173887,3.44539178469012,3.87685796543167,2.15471232685889,0,0,0.665191531965914,1.27006134691926,1.23012957516914,15.8481681015439,0.288851619751275,0,0,14.2300754450549,4.6880120671428,6.28228492768558,8.2352408324342,8.19654581950135,7.2826552954673,0.251793635951155,0.202753862439029,0.367093504323363,3.12956537739216,1.30815093828268,1.75748946187577,0.194429899074283,2.37976916763116,7.18762821824858,0,0,0.336093799142464,10.0331180054019,6.01720223871389,6.18806510732931,1.21389876515759,3.1739458756322,3.80298842103708,0.677689064138264,2.66788438833342,20.6976934974722,21.7550599764734,19.1829631035447,9.28760342607055,11.9107674649682,0.414758449233911,0.405017814995072,0.420649922702764,9.99778445413313,8.61387309711293,0.61245399607477,0.287536413054709,0,25.3266526298594,14.6840438797966,15.0534402591119,1.45074916503213,2.92760459527711,2.08365348222704,16.1926139420801,15.1945904708554,16.3494125121187,3.53554302568401,4.6982654663704,3.72798891650601,0.984440513331393,0.68014404096107,1.73918693221007,3.44169550792555,0.679971333707751,0.539703191637817,1.94932925234301,0.448026887097336,1.96622188184453,1.53387290320252,2.07828803682295,2.12003744706204,0.281686839553361,3.84979432242953,0,0,0.432982082022428,0.253359865475099,1.01104889002957,1.82694207550496,0.258937883647172,1.7813056687779,0.867426633830679,1.52232739156071,2.30615497256059,0.904335843315735,1.41106448562846,1.63366568728578,1.48316980640624,0.289198713839823,0.884610551949874,0.485300549842228,1.32504911076236,0.969750506270444,0,5.85561594023094,6.70229461803056,1.53274233125155,4.19352935770721,2.99951365496704,4.19331749341113,11.0845073159569,1.83000241127451,1.7591609295801,3.12883776346098,4.34716277461562,9.97382613885888,7.62533936418461,0.407357455401265,1.49288364732112,0,3.78795340595653,0.130120442962704,0.459804208866946,0.180062129805349,0.30140963567143,0.95251098811859,0.896796041993948,0.187403449119458,2.06962696591213,0,0.378212160335639,0.175951124163949,0,0,0,0,0.59710280045548,4.91549231119264,2.31613116403244,7.10408748488982,2.07125772535502,0.469052119962192,1.44049649168812,1.89395788468168,1.96764231747404,1.3884040159864,1.62773761325285,1.3413670069981,1.98501082024188,1.6455984991348,1.14917224855367,2.59420190546738,2.77779976108131,2.19550115291051,2.14730270016595,2.94405927989778,2.05809224758569,0,2.11560453330835,0.426576501070468,0,0.128867461322093,0.80673409849337,0.667134131534611,1.52180500890047,2.84717436926707,3.12928013975621,2.5133520880027,2.98434708061726,3.70431765526328,1.79763881730844,0.432276099749388,1.59313018603494,0,0,0,0,0.387904974335251,0.280543279561274,0.758838445491087,1.91893192373483,1.72698600625512,2.09775178667061,2.96452627087149,0.83422552858047,0.589676985339609,1.79889689907883,0.608580364165509,0.241177159752417,1.52775511068852,0.863088412352432,3.24270453550071,2.47105271869273,1.43768206527355,1.11642284300551,2.80833905803104,1.01031551178845,1.61457672169721,2.41221760681684,2.77129785249907,0.568474235311454,0,0.339490171550376,0.469380496577004,0.502518772325447,1.19021820443007,2.73187107000918,2.04925687338048,1.55025282754142,1.11618338060241,5.89907932976657,3.45369963731791,3.61622646453779,9.04747703635634,14.6854534631052,0,0,11.2385412991454,9.02529986759964,0,1.00988370881749,1.89304931649754,0.780877488593277,0.215423397732799,0,2.00518806674155,0.849229592366497,0,0.876767573733936,0,1.60660658210904,1.56134093729095,0.712262414669021,0.488660878060728,1.15479086080775,0,0.242780636154981,0.604647113929502,0.188605079755898,0,0.922305443831782,1.29214146584111,0.363533729477506,0.712994756769443,0.316036757935816,0,0,0.340439605753788,0.540183282093931,0.517434735131018,0.428674070063185,0.354680467284547,1.07021290561242,0.987294123612726,0.913394847343798,0.469343416127421,1.0591603543191,0.220528398054962,0.16488625294148,0.968786560175433,0.301564624640779,0.119372344003136,0.164140899745061,2.91480836629851,9.08583979851498,1.36696704638282,0.82554747185289,0.925972636848558,0.753473828018764,0.546776910884101,0.915112692826091,1.5298058699447,3.21888340344413,2.21119958087078,0,0,0.203319467126849,0.540026704109006,0.418176592028937,0.87345025498471,0.404593039154462,1.07449492442937,0.785267825952089,0.518459893167171,0,0,1.04661582230785,0.66183396182839,0.777804753376191,0.645799117388655,0.506868376472335,1.29092962510329,0.911430693907651,2.30690557736564,0.483168241652012,0.864090018773596,0.316011120628178,0,0,0.129920822977795,0,0.198681354781265,0.480781798079875,0,0,0.457240839929999,0.302478555410522,0.38983152295901,0.384847366561318,0.11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| |||
|short_description=p3@Paqr7 | |||
}} |
Latest revision as of 12:14, 26 September 2015
Short description: | p3@Paqr7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Paqr7_5end |
Coexpression cluster: | NA |
Association with transcript: | -65bp_to_ENSMUST00000134506, ENSMUST00000136171_5end |
EntrezGene: | Paqr7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 6.84e-09 | 73 |
regional part of nervous system | 9.80e-09 | 54 |
tube | 1.13e-08 | 114 |
nervous system | 3.59e-08 | 75 |
neural tube | 1.30e-07 | 52 |
neural rod | 1.30e-07 | 52 |
future spinal cord | 1.30e-07 | 52 |
neural keel | 1.30e-07 | 52 |
posterior neural tube | 2.01e-07 | 12 |
chordal neural plate | 2.01e-07 | 12 |
structure with developmental contribution from neural crest | 3.85e-07 | 92 |
anatomical conduit | 4.78e-07 | 122 |