FFCP PHASE1:Mm9::chr10:84380364..84380400,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=237422 | |EntrezGene=237422 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q80XE1 | |UniProt=Q80XE1 | ||
|association_with_transcript=0bp_to_NM_001013441_5end | |association_with_transcript=0bp_to_NM_001013441_5end | ||
|cluster_id=chr10:84380364..84380400,+ | |||
|description=CAGE_peak_1_at_Ric8b_5end | |description=CAGE_peak_1_at_Ric8b_5end | ||
|id=chr10:84380364..84380400,+ | |id=chr10:84380364..84380400,+ | ||
|ontology_enrichment_celltype=CL:0000540!4.69e-08!33;CL:0000047!4.69e-08!33;CL:0000031!4.69e-08!33;CL:0000404!4.69e-08!33;CL:0000393!5.18e-08!39;CL:0000211!5.18e-08!39;CL:0000117!4.50e-07!23;CL:0000337!4.50e-07!23 | |ontology_enrichment_celltype=CL:0000540!4.69e-08!33;CL:0000047!4.69e-08!33;CL:0000031!4.69e-08!33;CL:0000404!4.69e-08!33;CL:0000393!5.18e-08!39;CL:0000211!5.18e-08!39;CL:0000117!4.50e-07!23;CL:0000337!4.50e-07!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.53e-08,33;CL:0000047,4.53e-08,33;CL:0000031,4.53e-08,33;CL:0000404,4.53e-08,33;CL:0000393,5.01e-08,39;CL:0000211,5.01e-08,39;CL:0000117,4.36e-07,23;CL:0000337,4.36e-07,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.79e-08!73;UBERON:0005743!2.79e-08!73;UBERON:0000073!5.43e-08!75;UBERON:0001016!5.43e-08!75;UBERON:0004121!1.23e-07!102;UBERON:0000924!1.23e-07!102;UBERON:0006601!1.23e-07!102;UBERON:0000033!3.07e-07!63;UBERON:0002346!4.09e-07!71;UBERON:0003075!4.09e-07!71;UBERON:0007284!4.09e-07!71;UBERON:0001049!4.18e-07!52;UBERON:0005068!4.18e-07!52;UBERON:0006241!4.18e-07!52;UBERON:0007135!4.18e-07!52 | |ontology_enrichment_uberon=UBERON:0001017!2.79e-08!73;UBERON:0005743!2.79e-08!73;UBERON:0000073!5.43e-08!75;UBERON:0001016!5.43e-08!75;UBERON:0004121!1.23e-07!102;UBERON:0000924!1.23e-07!102;UBERON:0006601!1.23e-07!102;UBERON:0000033!3.07e-07!63;UBERON:0002346!4.09e-07!71;UBERON:0003075!4.09e-07!71;UBERON:0007284!4.09e-07!71;UBERON:0001049!4.18e-07!52;UBERON:0005068!4.18e-07!52;UBERON:0006241!4.18e-07!52;UBERON:0007135!4.18e-07!52 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.98e-08,73;UBERON:0001016,3.90e-08,75;UBERON:0004121,1.17e-07,95;UBERON:0000924,1.17e-07,95;UBERON:0006601,1.17e-07,95;UBERON:0000073,1.89e-07,54;UBERON:0002346,2.62e-07,64;UBERON:0003075,2.62e-07,64;UBERON:0007284,2.62e-07,64;UBERON:0001049,2.94e-07,52;UBERON:0005068,2.94e-07,52;UBERON:0006241,2.94e-07,52;UBERON:0007135,2.94e-07,52;UBERON:0010371,4.39e-07,73;UBERON:0010314,4.68e-07,92 | |||
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| ||
|short_description=p1@Ric8b | |short_description=p1@Ric8b | ||
}} | }} |
Latest revision as of 12:14, 26 September 2015
Short description: | p1@Ric8b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ric8b_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001013441_5end |
EntrezGene: | Ric8b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.53e-08 | 33 |
neuronal stem cell | 4.53e-08 | 33 |
neuroblast | 4.53e-08 | 33 |
electrically signaling cell | 4.53e-08 | 33 |
electrically responsive cell | 5.01e-08 | 39 |
electrically active cell | 5.01e-08 | 39 |
CNS neuron (sensu Vertebrata) | 4.36e-07 | 23 |
neuroblast (sensu Vertebrata) | 4.36e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.98e-08 | 73 |
nervous system | 3.90e-08 | 75 |
ectoderm-derived structure | 1.17e-07 | 95 |
ectoderm | 1.17e-07 | 95 |
presumptive ectoderm | 1.17e-07 | 95 |
regional part of nervous system | 1.89e-07 | 54 |
neurectoderm | 2.62e-07 | 64 |
neural plate | 2.62e-07 | 64 |
presumptive neural plate | 2.62e-07 | 64 |
neural tube | 2.94e-07 | 52 |
neural rod | 2.94e-07 | 52 |
future spinal cord | 2.94e-07 | 52 |
neural keel | 2.94e-07 | 52 |
ecto-epithelium | 4.39e-07 | 73 |
structure with developmental contribution from neural crest | 4.68e-07 | 92 |