FFCP PHASE1:Mm9::chr4:13670441..13670463,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12395 | |EntrezGene=12395 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UQX8 | |UniProt=Q3UQX8 | ||
|association_with_transcript=0bp_to_NM_001111026,uc008sau.2_5end | |association_with_transcript=0bp_to_NM_001111026,uc008sau.2_5end | ||
|cluster_id=chr4:13670441..13670463,+ | |||
|description=CAGE_peak_8_at_Runx1t1_5end | |description=CAGE_peak_8_at_Runx1t1_5end | ||
|id=chr4:13670441..13670463,+ | |id=chr4:13670441..13670463,+ | ||
|ontology_enrichment_celltype=CL:0000117!3.11e-11!23;CL:0000337!3.11e-11!23;CL:0000540!1.05e-07!33;CL:0000047!1.05e-07!33;CL:0000031!1.05e-07!33;CL:0000404!1.05e-07!33 | |ontology_enrichment_celltype=CL:0000117!3.11e-11!23;CL:0000337!3.11e-11!23;CL:0000540!1.05e-07!33;CL:0000047!1.05e-07!33;CL:0000031!1.05e-07!33;CL:0000404!1.05e-07!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.21e-13,23;CL:0000337,2.21e-13,23;CL:0000540,8.05e-09,33;CL:0000047,8.05e-09,33;CL:0000031,8.05e-09,33;CL:0000404,8.05e-09,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!3.05e-11!49;UBERON:0001049!1.55e-10!52;UBERON:0005068!1.55e-10!52;UBERON:0006241!1.55e-10!52;UBERON:0007135!1.55e-10!52;UBERON:0002020!3.66e-10!34;UBERON:0002346!5.44e-10!71;UBERON:0003075!5.44e-10!71;UBERON:0007284!5.44e-10!71;UBERON:0003080!1.52e-09!40;UBERON:0002780!3.70e-09!39;UBERON:0001890!3.70e-09!39;UBERON:0006240!3.70e-09!39;UBERON:0000033!1.08e-08!63;UBERON:0001017!1.55e-08!73;UBERON:0005743!1.55e-08!73;UBERON:0000073!4.50e-08!75;UBERON:0001016!4.50e-08!75;UBERON:0002616!8.20e-08!49;UBERON:0000955!8.44e-08!50;UBERON:0006238!8.44e-08!50;UBERON:0000468!1.03e-07!333;UBERON:0002791!1.16e-07!29;UBERON:0003528!1.16e-07!29;UBERON:0001893!1.16e-07!29 | |ontology_enrichment_uberon=UBERON:0003056!3.05e-11!49;UBERON:0001049!1.55e-10!52;UBERON:0005068!1.55e-10!52;UBERON:0006241!1.55e-10!52;UBERON:0007135!1.55e-10!52;UBERON:0002020!3.66e-10!34;UBERON:0002346!5.44e-10!71;UBERON:0003075!5.44e-10!71;UBERON:0007284!5.44e-10!71;UBERON:0003080!1.52e-09!40;UBERON:0002780!3.70e-09!39;UBERON:0001890!3.70e-09!39;UBERON:0006240!3.70e-09!39;UBERON:0000033!1.08e-08!63;UBERON:0001017!1.55e-08!73;UBERON:0005743!1.55e-08!73;UBERON:0000073!4.50e-08!75;UBERON:0001016!4.50e-08!75;UBERON:0002616!8.20e-08!49;UBERON:0000955!8.44e-08!50;UBERON:0006238!8.44e-08!50;UBERON:0000468!1.03e-07!333;UBERON:0002791!1.16e-07!29;UBERON:0003528!1.16e-07!29;UBERON:0001893!1.16e-07!29 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.73e-10,34;UBERON:0002346,6.48e-10,64;UBERON:0003075,6.48e-10,64;UBERON:0007284,6.48e-10,64;UBERON:0003056,1.98e-09,49;UBERON:0001049,1.50e-08,52;UBERON:0005068,1.50e-08,52;UBERON:0006241,1.50e-08,52;UBERON:0007135,1.50e-08,52;UBERON:0003080,4.23e-08,40;UBERON:0000073,5.41e-08,54;UBERON:0010371,1.02e-07,73;UBERON:0002780,1.52e-07,39;UBERON:0001890,1.52e-07,39;UBERON:0006240,1.52e-07,39;UBERON:0003528,2.42e-07,29;UBERON:0002791,2.42e-07,29;UBERON:0001893,2.42e-07,29;UBERON:0001017,4.01e-07,73;UBERON:0001016,9.70e-07,75 | |||
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| |phase1_expression=0.80074423552397,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0.515672092277442,8.6996078169627,6.34789175126439,3.1691570175309,0,0,0,0,0,0,0,4.14758449233911,2.8351247049655,2.94454945891935,0.856952953211411,1.10434270475807,2.32732518508413,3.92966431174769,0.919218786610021,0,0.638436690425939,0.768032666281217,4.87979264601717,4.39140689291566,4.16730696445408,0.279182999001381,0.56276261003168,1.37518422999129,4.41942878210502,3.70166370077668,6.52398060388552,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.29688427812965,0.346970653532272,0,0.230615497256059,0.150722640552623,0,0,0,0.144599356919912,0,0.647067399789637,0,0,0,0,0.41889341362691,0,0,0,0,1.19832511523858,0.457500602818626,4.39790232395025,0.521472960576829,0.767146371990992,1.0389402227978,0.811206315338788,0.81471491080253,0.124406970610093,0,0.841767423545896,0.390361328888111,0.229902104433473,0.360124259610698,2.41127708537144,2.78949646520444,2.3060469651273,1.87403449119458,0,1.07783996466421,2.26927296201383,2.28736461413134,1.31517439456545,1.94633074457919,1.0447564995665,0.823128545631774,0.995171334092466,0,0,0,1.24275463521301,0.469052119962192,0.720248245844059,1.18372367792605,0.393528463494808,0.925602677324269,0.232533944750408,0,0,0.16455984991348,0.164167464079095,0.243206428637567,0.438599962275997,0,0.402619256281115,0.420579897128254,2.88132914661996,0,0,3.41261200856374,1.85789337488351,1.15980715189884,0.605050573870028,0.444756087689741,0.380451252225118,1.42358718463353,0.329397909448022,0.754005626400808,0.198956472041151,0.38992817423824,0,0,0,0.379335801906163,0.228497025219458,0,0.203651327845314,0,0.140271639780637,0.0632365371242573,0,0,0,0,0.500535317148282,0.393117990226406,0.449724224769707,0,0,0,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0.369506380333209,1.70542270593436,0.651859905768103,0.848725428875941,0,0.335012514883631,0.238043640886014,0.195133647857799,0.788175720530955,0.664394068946325,1.2756381492599,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0.275936746304732,0.321101179975584,0.35163505977661,0.655739781506702,0.252470927204373,0,1.17131623288992,0,0.238968797952552,0.222798674082394,0.566153061577665,0,0,0,0.321321316421807,0,1.42452482933804,0.977321756121456,1.64970122972535,0,1.21390318077491,0.604647113929502,0.754420319023592,0,0.614870295887855,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,1.05418608574999,0,1.36175842301515,1.08036656418786,0.258717367565509,0.857348140126369,1.59606210278046,0.356737635204141,0.658196082408484,0,0,0,0,0,0.322928853391811,0.180938774784468,0.238744688006273,0,0.874442509889552,0.927126510052548,0,0,0,0,0,0,0,0,0,0,2.37251995185852,1.01659733563424,0.756037385752609,0.418176592028937,0.655087691238533,0.674321731924103,0.661227645802687,0.26175594198403,0.129614973291793,0,0,0.897099276263873,0.330916980914195,0.583353565032143,0.387479470433193,0.337912250981556,0.352071715937262,0,0,0,0,0,0.405450430580328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.772758376128762,0,0.549454872801795,0,0,0.564751842617067,1.38097570952153,1.14579102687879,0.859265911718438,0,0,1.35004500046361,1.35096360967266,0.906284817968409,0.51776031175182,1.97195960409936,5.58634822761443,2.39027048055788,0.729320151204882,1.25767897576789,2.38996560985018,0.666740183404846,0.618105171716683,1.92551525755089,0.758091635291392,1.52087579934144,1.88626341386076,1.03005658216871,1.28050304809739,1.95280594449085,1.42888107384922,1.0429589335037,0.964546102318525,0.824171801606613,0.441596760403192,1.02860775715625,0.532427418478012,1.1921809497366,1.88950341622027,0.846984423737976,1.52306294205018,0.73171189149109,1.05227884575137,0.814824683075171,2.24456908663095,1.30498519936592,0.788035859004508,0,1.39443157067369,0.964533054905707,1.49886346762768,0.467863216890817,1.50409737833809,0.191288332068843,0.220591419119515,0.231867835620421 | ||
|short_description=p8@Runx1t1 | |short_description=p8@Runx1t1 | ||
}} | }} |
Latest revision as of 13:30, 26 September 2015
Short description: | p8@Runx1t1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Runx1t1_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 0bp_to_NM_001111026, uc008sau.2_5end |
EntrezGene: | Runx1t1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.21e-13 | 23 |
neuroblast (sensu Vertebrata) | 2.21e-13 | 23 |
neuron | 8.05e-09 | 33 |
neuronal stem cell | 8.05e-09 | 33 |
neuroblast | 8.05e-09 | 33 |
electrically signaling cell | 8.05e-09 | 33 |
Ontology term | p-value | n |
---|---|---|
gray matter | 2.73e-10 | 34 |
neurectoderm | 6.48e-10 | 64 |
neural plate | 6.48e-10 | 64 |
presumptive neural plate | 6.48e-10 | 64 |
pre-chordal neural plate | 1.98e-09 | 49 |
neural tube | 1.50e-08 | 52 |
neural rod | 1.50e-08 | 52 |
future spinal cord | 1.50e-08 | 52 |
neural keel | 1.50e-08 | 52 |
anterior neural tube | 4.23e-08 | 40 |
regional part of nervous system | 5.41e-08 | 54 |
ecto-epithelium | 1.02e-07 | 73 |
regional part of forebrain | 1.52e-07 | 39 |
forebrain | 1.52e-07 | 39 |
future forebrain | 1.52e-07 | 39 |
brain grey matter | 2.42e-07 | 29 |
regional part of telencephalon | 2.42e-07 | 29 |
telencephalon | 2.42e-07 | 29 |
central nervous system | 4.01e-07 | 73 |
nervous system | 9.70e-07 | 75 |