FFCP PHASE1:Mm9::chr12:39510260..39510271,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14009 | |EntrezGene=14009 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=30 | |||
|TSSclassifier=NA | |||
|UniProt=Q8CCR6 | |UniProt=Q8CCR6 | ||
|association_with_transcript=-26bp_to_NM_001163154,uc011ylm.1_5end | |association_with_transcript=-26bp_to_NM_001163154,uc011ylm.1_5end | ||
|cluster_id=chr12:39510260..39510271,+ | |||
|description=CAGE_peak_10_at_Etv1_5end | |description=CAGE_peak_10_at_Etv1_5end | ||
|id=chr12:39510260..39510271,+ | |id=chr12:39510260..39510271,+ | ||
|ontology_enrichment_celltype=CL:0000107!9.01e-10!9;CL:0000540!1.40e-09!33;CL:0000047!1.40e-09!33;CL:0000031!1.40e-09!33;CL:0000404!1.40e-09!33;CL:0000393!6.33e-07!39;CL:0000211!6.33e-07!39;CL:0002319!8.22e-07!43 | |ontology_enrichment_celltype=CL:0000107!9.01e-10!9;CL:0000540!1.40e-09!33;CL:0000047!1.40e-09!33;CL:0000031!1.40e-09!33;CL:0000404!1.40e-09!33;CL:0000393!6.33e-07!39;CL:0000211!6.33e-07!39;CL:0002319!8.22e-07!43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000107,1.03e-28,9;CL:0000540,4.35e-13,33;CL:0000047,4.35e-13,33;CL:0000031,4.35e-13,33;CL:0000404,4.35e-13,33;CL:0000393,8.56e-11,39;CL:0000211,8.56e-11,39;CL:0002319,1.28e-09,43;CL:0000221,2.32e-09,44;CL:0000133,2.32e-09,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.98e-17!73;UBERON:0005743!2.98e-17!73;UBERON:0000073!5.30e-17!75;UBERON:0001016!5.30e-17!75;UBERON:0004121!1.36e-11!102;UBERON:0000924!1.36e-11!102;UBERON:0006601!1.36e-11!102;UBERON:0000955!4.63e-10!50;UBERON:0006238!4.63e-10!50;UBERON:0002410!9.01e-10!9;UBERON:0002616!2.28e-09!49;UBERON:0000010!1.92e-08!11;UBERON:0001049!3.01e-08!52;UBERON:0005068!3.01e-08!52;UBERON:0006241!3.01e-08!52;UBERON:0007135!3.01e-08!52;UBERON:0000033!8.29e-08!63;UBERON:0002346!2.49e-07!71;UBERON:0003075!2.49e-07!71;UBERON:0007284!2.49e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,1.03e-28,9;UBERON:0000010,2.62e-23,11;UBERON:0001017,2.48e-19,73;UBERON:0001016,9.86e-19,75;UBERON:0004121,6.59e-16,95;UBERON:0000924,6.59e-16,95;UBERON:0006601,6.59e-16,95;UBERON:0000013,1.24e-13,3;UBERON:0010313,4.25e-13,3;UBERON:0002342,4.25e-13,3;UBERON:0002005,4.25e-13,3;UBERON:0005428,4.25e-13,3;UBERON:0005062,4.25e-13,3;UBERON:0002021,8.83e-10,10;UBERON:0000411,8.83e-10,10;UBERON:0001950,8.83e-10,10;UBERON:0000073,3.46e-07,54;UBERON:0002346,3.53e-07,64;UBERON:0003075,3.53e-07,64;UBERON:0007284,3.53e-07,64;UBERON:0000955,3.83e-07,47;UBERON:0006238,3.83e-07,47;UBERON:0011216,6.78e-07,194 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0,0,0,0.285650984403804,0,0,0,0.919218786610021,1.10115880999389,1.0214987046815,0.307213066512487,0.131886287730194,0.0914876436024097,0,1.11673199600552,0.56276261003168,0.15279824777681,0,0.142371680799103,0.186399445825301,0.075726193333184,0,0,0,0,0,0,0,0.280888840263504,0.170430322578058,0,0,0,0,0,0,0,0,0,0,0,0.593768556259299,0,0,0.230615497256059,0,0,0.502666365318702,0,0,0,0,0,0,0,20.7874365878198,32.2547928492721,0,0,0,0,0.299581278809645,0.915001205637253,0.376963056338593,0.869121600961382,0.511430914660661,0.62336413367868,0.811206315338788,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0,0.393528463494808,0,0,0,0.350296027101508,0.16455984991348,0,0.162137619091711,0.146199987425332,0,0,0.630869845692382,0.102904612379284,0,0,0,0.928946687441754,0.38660238396628,0,0.444756087689741,0.190225626112559,0,0.658795818896044,0,0.198956472041151,0.38992817423824,0.898819408654221,0.648414149624083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0.234690248288502,0,0.238043640886014,0,0.945810864637146,0.44292937929755,0.159454768657487,0,0,0.289298117163023,0,0,0,0,0.321101179975584,0.117211686592203,0,0,3.47059041357882,1.56175497718655,3.01592756825919,1.43381278771531,0.668396022247182,1.98153571552183,2.42886421004937,5.26060544240361,6.7198922250909,3.53453448063988,0,0,0,0.164970122972535,0,0.242780636154981,0,0,0.295301892880773,0.307435147943927,0,0,0,0,0,0,2.38307724027652,0,0,0,0,0,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.609958401380546,0.540026704109006,0,1.09181281873089,0.404593039154462,0.495920734352016,0.523511883968059,0.259229946583586,4.97071450469541,0,0,0,0,0,0.168956125490778,0,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0.460325236507177,1.14579102687879,0.859265911718438,1.37016503954128,2.2661816921691,0,1.35096360967266,0.453142408984205,2.07104124700728,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.17230640686684,0.476293691283074,0.231768651889711,0,0.412085900803307,0.147198920134397,0.342869252385415,0.354951612318675,0,0,0,0.0846146078916765,0,0,0.407412341537585,0,0.237270036248348,0.0985044823755635,0.409231043169689,0.154936841185966,0.578719832943424,0,0,0,0.382576664137687,0.220591419119515,0.231867835620421 | |phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0,0,0,0.285650984403804,0,0,0,0.919218786610021,1.10115880999389,1.0214987046815,0.307213066512487,0.131886287730194,0.0914876436024097,0,1.11673199600552,0.56276261003168,0.15279824777681,0,0.142371680799103,0.186399445825301,0.075726193333184,0,0,0,0,0,0,0,0.280888840263504,0.170430322578058,0,0,0,0,0,0,0,0,0,0,0,0.593768556259299,0,0,0.230615497256059,0,0,0.502666365318702,0,0,0,0,0,0,0,20.7874365878198,32.2547928492721,0,0,0,0,0.299581278809645,0.915001205637253,0.376963056338593,0.869121600961382,0.511430914660661,0.62336413367868,0.811206315338788,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0,0.393528463494808,0,0,0,0.350296027101508,0.16455984991348,0,0.162137619091711,0.146199987425332,0,0,0.630869845692382,0.102904612379284,0,0,0,0.928946687441754,0.38660238396628,0,0.444756087689741,0.190225626112559,0,0.658795818896044,0,0.198956472041151,0.38992817423824,0.898819408654221,0.648414149624083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0.234690248288502,0,0.238043640886014,0,0.945810864637146,0.44292937929755,0.159454768657487,0,0,0.289298117163023,0,0,0,0,0.321101179975584,0.117211686592203,0,0,3.47059041357882,1.56175497718655,3.01592756825919,1.43381278771531,0.668396022247182,1.98153571552183,2.42886421004937,5.26060544240361,6.7198922250909,3.53453448063988,0,0,0,0.164970122972535,0,0.242780636154981,0,0,0.295301892880773,0.307435147943927,0,0,0,0,0,0,2.38307724027652,0,0,0,0,0,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.609958401380546,0.540026704109006,0,1.09181281873089,0.404593039154462,0.495920734352016,0.523511883968059,0.259229946583586,4.97071450469541,0,0,0,0,0,0.168956125490778,0,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0.460325236507177,1.14579102687879,0.859265911718438,1.37016503954128,2.2661816921691,0,1.35096360967266,0.453142408984205,2.07104124700728,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.17230640686684,0.476293691283074,0.231768651889711,0,0.412085900803307,0.147198920134397,0.342869252385415,0.354951612318675,0,0,0,0.0846146078916765,0,0,0.407412341537585,0,0.237270036248348,0.0985044823755635,0.409231043169689,0.154936841185966,0.578719832943424,0,0,0,0.382576664137687,0.220591419119515,0.231867835620421 | ||
|short_description=p10@Etv1 | |short_description=p10@Etv1 | ||
}} | }} |
Latest revision as of 14:39, 26 September 2015
Short description: | p10@Etv1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Etv1_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | -26bp_to_NM_001163154, uc011ylm.1_5end |
EntrezGene: | Etv1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 1.03e-28 | 9 |
neuron | 4.35e-13 | 33 |
neuronal stem cell | 4.35e-13 | 33 |
neuroblast | 4.35e-13 | 33 |
electrically signaling cell | 4.35e-13 | 33 |
electrically responsive cell | 8.56e-11 | 39 |
electrically active cell | 8.56e-11 | 39 |
neural cell | 1.28e-09 | 43 |
ectodermal cell | 2.32e-09 | 44 |
neurectodermal cell | 2.32e-09 | 44 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 1.03e-28 | 9 |
peripheral nervous system | 2.62e-23 | 11 |
central nervous system | 2.48e-19 | 73 |
nervous system | 9.86e-19 | 75 |
ectoderm-derived structure | 6.59e-16 | 95 |
ectoderm | 6.59e-16 | 95 |
presumptive ectoderm | 6.59e-16 | 95 |
sympathetic nervous system | 1.24e-13 | 3 |
neural crest-derived structure | 4.25e-13 | 3 |
neural crest | 4.25e-13 | 3 |
enteric nervous system | 4.25e-13 | 3 |
vagal neural crest | 4.25e-13 | 3 |
neural fold | 4.25e-13 | 3 |
occipital lobe | 8.83e-10 | 10 |
visual cortex | 8.83e-10 | 10 |
neocortex | 8.83e-10 | 10 |
regional part of nervous system | 3.46e-07 | 54 |
neurectoderm | 3.53e-07 | 64 |
neural plate | 3.53e-07 | 64 |
presumptive neural plate | 3.53e-07 | 64 |
brain | 3.83e-07 | 47 |
future brain | 3.83e-07 | 47 |
organ system subdivision | 6.78e-07 | 194 |