FFCP PHASE1:Mm9::chr1:175843159..175843173,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=15951,381308 | |EntrezGene=15951,381308 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2884 | |||
|TSSclassifier=NA | |||
|UniProt=B7ZNS3,D0QMC3 | |UniProt=B7ZNS3,D0QMC3 | ||
|association_with_transcript=84bp_to_uc007drw.1,uc007dsa.1,uc007dsb.2_5end | |||
|cluster_id=chr1:175843159..175843173,- | |||
|description=CAGE_peak_2_at_Mnda_5end,CAGE_peak_4_at_Ifi204_5end | |||
|id=chr1:175843159..175843173,- | |||
|ontology_enrichment_celltype=CL:0000222!2.80e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.09e-18,7;CL:0000680,5.40e-16,6;CL:0000187,5.40e-16,6;CL:0000056,5.40e-16,6;CL:0000355,2.05e-10,9;CL:0002494,2.96e-09,3;CL:0000737,2.96e-09,3;CL:0000746,2.96e-09,3;CL:0000513,2.96e-09,3;CL:0000215,6.52e-09,3;CL:0000192,2.25e-08,3;CL:0000359,2.25e-08,3;CL:0002539,2.25e-08,3;CL:0000514,2.25e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!1.26e-08!193;UBERON:0004120!1.26e-08!193;UBERON:0006603!1.26e-08!193;UBERON:0004872!2.55e-08!33;UBERON:0003081!1.25e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,1.40e-12,5;UBERON:0007500,1.40e-12,5;UBERON:0001981,1.40e-12,5;UBERON:0002049,1.40e-12,5;UBERON:0007798,1.40e-12,5;UBERON:0004537,1.40e-12,5;UBERON:0006965,1.40e-12,5;UBERON:0001134,2.05e-10,9;UBERON:0002036,2.05e-10,9;UBERON:0002385,2.05e-10,9;UBERON:0000486,2.05e-10,9;UBERON:0007503,2.05e-10,9;UBERON:0001015,2.05e-10,9;UBERON:0002329,2.05e-10,9;UBERON:0003082,2.05e-10,9;UBERON:0003059,2.05e-10,9;UBERON:0007282,2.05e-10,9;UBERON:0004290,2.05e-10,9;UBERON:0009618,2.05e-10,9;UBERON:0000947,3.50e-10,4;UBERON:0001637,3.50e-10,4;UBERON:0004573,3.50e-10,4;UBERON:0003509,3.50e-10,4;UBERON:0004571,3.50e-10,4;UBERON:0010191,3.50e-10,4;UBERON:0004572,3.50e-10,4;UBERON:0000383,2.69e-09,10;UBERON:0007524,2.21e-08,11;UBERON:0003077,2.21e-08,11;UBERON:0007285,2.21e-08,11;UBERON:0001135,2.25e-08,3;UBERON:0004237,2.25e-08,3;UBERON:0004695,2.25e-08,3;UBERON:0002111,2.25e-08,3;UBERON:0004178,2.25e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.595303031057488,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14024590558481,1.31790010585369,3.12029478674859,0.782391344348039,0.218025156380447,0.439372365468944,0.972149495371417,1.39986421625363,0,0,0,0.336093799142464,3.34437266846731,4.01146815914259,8.25075347643908,0,0,0,1.0165335962074,0.889294796111139,0.449949858640699,0,1.4209602298922,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34751199332871,5.89458168832927,2.89864488701678,0,0,0,0,0,0.702222100658759,4.60161870960756,5.97507810586598,2.47337702157238,0,2.56652954828636,0,0,0.432982082022428,1.01343946190039,0.505524445014783,0,3.6251303710604,0,0,0,0.461230994512117,0.150722640552623,0.470354828542819,0.251333182659351,0,1.01219549843938,0,0.161766849947409,0,0,0,0,0,0,0,1.19980546198682,0.127070227073065,0,0,0,0,0,0,0,0.305518091550949,0.870848794270651,0.252722758433675,0.420883711772948,0,0,0,0,0.476255494059295,0,0.187403449119458,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0.284163499395593,0,0,0.180062061461015,0.23674473558521,0,0,0,0,0.116765342367169,0.16455984991348,0.164167464079095,0.0810688095458557,0.584799949701329,0.658650345873152,0.402619256281115,0,0.102904612379284,0,0,0,0,0.128867461322093,0,0,0.380451252225118,0,0.164698954724011,0,0,0,0,0.432276099749388,0.199141273254367,0.189667900953082,0,0,0,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0.31399745568275,0,0.296452627087149,0.166845105716094,0.196558995113203,0.224862112384854,0.405720242777006,0,0.25462585178142,1.15078454980324,0.486405680325106,0.274561413188081,0,0,0,0.252578877947112,0.179397413521912,0,0.369506380333209,0,0,0,0,0.167506257441816,0,0.780534591431195,0.157635144106191,0,0,0.491589944147214,0.863424909329478,0.433947175744535,1.50791283939272,8.15858525728064,0,1.65562047782839,0,0,5.24591825205361,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0.99358059645788,0,0.325773918707152,0.824850614862677,0,0,0,0,0,0,0,0,0.356497378384721,0.316036757935816,0,2.06271086496374,0,0,0.129358683782755,0,0,0,0,0,0.23467170806371,0.42366414172764,0.220528398054962,0.16488625294148,0.968786560175433,0.361877549568935,0.238744688006273,0,0,0,1.02522528478712,0,0.370389054739423,0.188368457004691,0.546776910884101,1.37266903923914,0,0.139951452323658,0,0,0,0,0,0,0.218362563746178,0,0.247960367176008,0,0.129614973291793,0,1.12738587736838,0,0,0.194451188344048,0,0,0.117357238645754,0,0,0,0,0.316011120628178,0,0.513554785824136,1.03936658382236,0.358053391334963,0.198681354781265,0.841368146639782,0.590758108698309,1.00966449948148,0.304827226619999,1.51239277705261,0.877120926657772,1.05833025804362,1.05189211963412,0.453460767230423,0,0,0,0.19318959403219,2.43987218086537,2.01466786693992,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.229741875822453,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0.182927972872773,0,0.135804113845862,0,0.237270036248348,0.0985044823755635,0,0,0.192906610981141,0,0,0,0.191288332068843,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.595303031057488,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14024590558481,1.31790010585369,3.12029478674859,0.782391344348039,0.218025156380447,0.439372365468944,0.972149495371417,1.39986421625363,0,0,0,0.336093799142464,3.34437266846731,4.01146815914259,8.25075347643908,0,0,0,1.0165335962074,0.889294796111139,0.449949858640699,0,1.4209602298922,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34751199332871,5.89458168832927,2.89864488701678,0,0,0,0,0,0.702222100658759,4.60161870960756,5.97507810586598,2.47337702157238,0,2.56652954828636,0,0,0.432982082022428,1.01343946190039,0.505524445014783,0,3.6251303710604,0,0,0,0.461230994512117,0.150722640552623,0.470354828542819,0.251333182659351,0,1.01219549843938,0,0.161766849947409,0,0,0,0,0,0,0,1.19980546198682,0.127070227073065,0,0,0,0,0,0,0,0.305518091550949,0.870848794270651,0.252722758433675,0.420883711772948,0,0,0,0,0.476255494059295,0,0.187403449119458,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0.284163499395593,0,0,0.180062061461015,0.23674473558521,0,0,0,0,0.116765342367169,0.16455984991348,0.164167464079095,0.0810688095458557,0.584799949701329,0.658650345873152,0.402619256281115,0,0.102904612379284,0,0,0,0,0.128867461322093,0,0,0.380451252225118,0,0.164698954724011,0,0,0,0,0.432276099749388,0.199141273254367,0.189667900953082,0,0,0,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0.31399745568275,0,0.296452627087149,0.166845105716094,0.196558995113203,0.224862112384854,0.405720242777006,0,0.25462585178142,1.15078454980324,0.486405680325106,0.274561413188081,0,0,0,0.252578877947112,0.179397413521912,0,0.369506380333209,0,0,0,0,0.167506257441816,0,0.780534591431195,0.157635144106191,0,0,0.491589944147214,0.863424909329478,0.433947175744535,1.50791283939272,8.15858525728064,0,1.65562047782839,0,0,5.24591825205361,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0.99358059645788,0,0.325773918707152,0.824850614862677,0,0,0,0,0,0,0,0,0.356497378384721,0.316036757935816,0,2.06271086496374,0,0,0.129358683782755,0,0,0,0,0,0.23467170806371,0.42366414172764,0.220528398054962,0.16488625294148,0.968786560175433,0.361877549568935,0.238744688006273,0,0,0,1.02522528478712,0,0.370389054739423,0.188368457004691,0.546776910884101,1.37266903923914,0,0.139951452323658,0,0,0,0,0,0,0.218362563746178,0,0.247960367176008,0,0.129614973291793,0,1.12738587736838,0,0,0.194451188344048,0,0,0.117357238645754,0,0,0,0,0.316011120628178,0,0.513554785824136,1.03936658382236,0.358053391334963,0.198681354781265,0.841368146639782,0.590758108698309,1.00966449948148,0.304827226619999,1.51239277705261,0.877120926657772,1.05833025804362,1.05189211963412,0.453460767230423,0,0,0,0.19318959403219,2.43987218086537,2.01466786693992,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.229741875822453,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0.182927972872773,0,0.135804113845862,0,0.237270036248348,0.0985044823755635,0,0,0.192906610981141,0,0,0,0.191288332068843,0,0.231867835620421 | ||
|short_description=p2@Mnda,p4@Ifi204 | |||
}} | }} |
Latest revision as of 20:50, 26 September 2015
Short description: | p2@Mnda, p4@Ifi204 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Mnda_5end, CAGE_peak_4_at_Ifi204_5end |
Coexpression cluster: | MCL_coexpression_mm9:2884 |
Association with transcript: | 84bp_to_uc007drw.1, uc007dsa.1, uc007dsb.2_5end |
EntrezGene: | 15951,381308 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.09e-18 | 7 |
muscle precursor cell | 5.40e-16 | 6 |
muscle cell | 5.40e-16 | 6 |
myoblast | 5.40e-16 | 6 |
multi-potent skeletal muscle stem cell | 2.05e-10 | 9 |
cardiocyte | 2.96e-09 | 3 |
striated muscle cell | 2.96e-09 | 3 |
cardiac muscle cell | 2.96e-09 | 3 |
cardiac muscle myoblast | 2.96e-09 | 3 |
barrier cell | 6.52e-09 | 3 |
smooth muscle cell | 2.25e-08 | 3 |
vascular associated smooth muscle cell | 2.25e-08 | 3 |
aortic smooth muscle cell | 2.25e-08 | 3 |
smooth muscle myoblast | 2.25e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
vessel | 1.40e-12 | 5 |
epithelial tube open at both ends | 1.40e-12 | 5 |
blood vessel | 1.40e-12 | 5 |
vasculature | 1.40e-12 | 5 |
vascular system | 1.40e-12 | 5 |
blood vasculature | 1.40e-12 | 5 |
vascular cord | 1.40e-12 | 5 |
skeletal muscle tissue | 2.05e-10 | 9 |
striated muscle tissue | 2.05e-10 | 9 |
muscle tissue | 2.05e-10 | 9 |
multilaminar epithelium | 2.05e-10 | 9 |
epithelial vesicle | 2.05e-10 | 9 |
musculature | 2.05e-10 | 9 |
somite | 2.05e-10 | 9 |
myotome | 2.05e-10 | 9 |
presomitic mesoderm | 2.05e-10 | 9 |
presumptive segmental plate | 2.05e-10 | 9 |
dermomyotome | 2.05e-10 | 9 |
trunk paraxial mesoderm | 2.05e-10 | 9 |
aorta | 3.50e-10 | 4 |
artery | 3.50e-10 | 4 |
systemic artery | 3.50e-10 | 4 |
arterial blood vessel | 3.50e-10 | 4 |
systemic arterial system | 3.50e-10 | 4 |
aortic system | 3.50e-10 | 4 |
arterial system | 3.50e-10 | 4 |
musculature of body | 2.69e-09 | 10 |
dense mesenchyme tissue | 2.21e-08 | 11 |
paraxial mesoderm | 2.21e-08 | 11 |
presumptive paraxial mesoderm | 2.21e-08 | 11 |
smooth muscle tissue | 2.25e-08 | 3 |
blood vessel smooth muscle | 2.25e-08 | 3 |
arterial system smooth muscle | 2.25e-08 | 3 |
artery smooth muscle tissue | 2.25e-08 | 3 |
aorta smooth muscle tissue | 2.25e-08 | 3 |