FFCP PHASE1:Mm9::chr11:107332054..107332069,-: Difference between revisions
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{{FFCP|EntrezGene=71795|HGNC=|UniProt=E9Q4C5,Q8K4R4|association_with_transcript=-20bp_to_ENSMUST00000166405,NM_145823,uc007mal.1,uc007mam.1,uc007man.1,uc007mao.1,uc007map.1,uc011ygq.1_5end|description=CAGE_peak_2_at_Pitpnc1_5end|id=chr11:107332054..107332069,-|ontology_enrichment_celltype=CL:0000540!1.98e-10!33;CL:0000047!1.98e-10!33;CL:0000031!1.98e-10!33;CL:0000404!1.98e-10!33;CL:0000117!1.03e-07!23;CL:0000337!1.03e-07!23;CL:0000393!6.26e-07!39;CL:0000211!6.26e-07!39|ontology_enrichment_celltype_v019_2=CL:0000540,1.96e-10,33;CL:0000047,1.96e-10,33;CL:0000031,1.96e-10,33;CL:0000404,1.96e-10,33;CL:0000117,1.03e-07,23;CL:0000337,1.03e-07,23;CL:0000393,6.51e-07,39;CL:0000211,6.51e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.38e-11!73;UBERON:0005743!3.38e-11!73;UBERON:0000073!5.34e-10!75;UBERON:0001016!5.34e-10!75;UBERON:0000153!7.15e-09!94;UBERON:0002020!1.07e-08!34;UBERON:0001049!1.27e-08!52;UBERON:0005068!1.27e-08!52;UBERON:0006241!1.27e-08!52;UBERON:0007135!1.27e-08!52;UBERON:0000475!1.74e-08!200;UBERON:0002346!3.90e-08!71;UBERON:0003075!3.90e-08!71;UBERON:0007284!3.90e-08!71;UBERON:0007811!6.51e-08!86;UBERON:0003056!1.54e-07!49;UBERON:0000033!1.91e-07!63;UBERON:0000477!3.02e-07!154;UBERON:0002616!3.48e-07!49;UBERON:0004121!5.78e-07!102;UBERON:0000924!5.78e-07!102;UBERON:0006601!5.78e-07!102;UBERON:0000955!6.39e-07!50;UBERON:0006238!6.39e-07!50;UBERON:0002791!9.69e-07!29;UBERON:0003528!9.69e-07!29;UBERON:0001893!9.69e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.11e-11,73;UBERON:0002346,4.34e-11,64;UBERON:0003075,4.34e-11,64;UBERON:0007284,4.34e-11,64;UBERON:0001016,5.41e-10,75;UBERON:0004121,4.78e-09,95;UBERON:0000924,4.78e-09,95;UBERON:0006601,4.78e-09,95;UBERON:0000073,5.26e-09,54;UBERON:0010371,7.03e-09,73;UBERON:0002020,1.06e-08,34;UBERON:0001049,1.26e-08,52;UBERON:0005068,1.26e-08,52;UBERON:0006241,1.26e-08,52;UBERON:0007135,1.26e-08,52;UBERON:0003056,1.53e-07,49;UBERON:0003528,9.64e-07,29;UBERON:0002791,9.64e-07,29;UBERON:0001893,9.64e-07,29|phase1_expression=4.64431656603902,0,0,0,0,0.503637815735669,0,21.5635950147432,20.4143647119917,14.5120006319636,2.05461561870606,1.67521533890206,21.7424927012631,21.5928393974924,7.32841475994458,12.5534665781692,9.79386629379405,4.57420139769445,7.95263714913285,6.36584477697045,4.76242424845991,2.78014663362479,2.61199789138935,0.799962113967033,0.91763712426868,0,0,0,0.380046838912748,0.504060259519861,0.443461021310609,3.17515336729816,2.46025915033828,15.8481681015439,0.866554859253824,1.49611180822643,1.42918549383658,10.0447591376858,6.2506827561904,7.32933241563318,8.82347232046521,16.3930916390027,10.1957174136542,4.78407908307194,3.54819259268301,5.50640256485045,4.69434806608824,1.09012578190223,3.29529274101708,1.74986909166855,3.91961980551015,0,5.87239121202077,26.8383992544197,25.2070349356848,0.514518872071894,0.573066879877513,2.06268836910977,8.49729135610311,9.52183762689659,9.50747105259269,2.37191172448392,2.66788438833342,5.39939830368839,1.97773272513395,3.5524005747305,2.69640099466564,6.14749288514487,8.8136170462206,9.31540974488665,7.36137364729837,10.8547374073445,9.49734726091938,8.45186514583183,6.51749202924007,13.7882817991503,5.50579404996943,13.4071704989447,11.0596703944495,8.17694983927202,9.33173964744578,6.25096044668112,8.37548997004143,9.56696437053856,7.94550888439413,12.6690291753677,9.96601765593721,8.38797506213853,0.908714319998209,1.73814588245607,20.8702431865208,8.60423876981386,12.9194553404473,1.07940638327563,9.09686984426737,6.72040330646003,3.5111105032938,0.852151612890289,1.03914401841148,1.41335829804136,3.94361575374705,1.28326477414318,5.09610479413291,0,4.76280290224671,6.33399663687746,4.04419556011827,4.45317130904334,10.0985774622397,2.82040064223167,4.16364784238726,3.65358573974569,0.691846491768175,2.41156224884196,5.05631440683531,2.38766523526383,0.741584903203122,6.07317299063629,6.19227386364912,3.72063754879041,5.96272099843063,5.33362778448744,3.72783522436244,7.90508151931177,8.16842156572475,1.27728527604296,8.14742846640258,8.99854096490112,7.24300294316469,13.0317856282196,13.2675174817402,11.5602003943835,7.99591872884472,9.71718737855256,12.0517065844545,13.6282660976916,4.48093200941392,4.22983700074316,3.53811861807145,7.99679052368601,7.41686524887411,5.0578462975364,5.22180176435513,6.32960234910003,7.96027040070536,7.68682321709099,11.7127155699661,11.1242449417777,6.25147179505242,11.7245769704048,11.4368230706567,5.2606975782618,4.72680323683516,9.05455632957633,4.7329891373827,3.38358253591438,4.91549231119264,4.88961023517959,5.96743348730745,2.27838349789052,3.28336483973535,2.70093092191522,4.02466050494857,3.14822770795846,4.01094493507183,4.41814495025775,4.82892122519315,5.83826711835847,4.60767579757745,6.23836363500562,6.89084881139774,7.45619935869195,6.14740322814942,6.71032093801859,8.20130799400096,7.51203670368776,2.64335026387038,0.793351699990633,6.82522401712749,6.73486348395272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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=71795 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=E9Q4C5,Q8K4R4 | |||
|association_with_transcript=-20bp_to_ENSMUST00000166405,NM_145823,uc007mal.1,uc007mam.1,uc007man.1,uc007mao.1,uc007map.1,uc011ygq.1_5end | |||
|cluster_id=chr11:107332054..107332069,- | |||
|description=CAGE_peak_2_at_Pitpnc1_5end | |||
|id=chr11:107332054..107332069,- | |||
|ontology_enrichment_celltype=CL:0000540!1.98e-10!33;CL:0000047!1.98e-10!33;CL:0000031!1.98e-10!33;CL:0000404!1.98e-10!33;CL:0000117!1.03e-07!23;CL:0000337!1.03e-07!23;CL:0000393!6.26e-07!39;CL:0000211!6.26e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.96e-10,33;CL:0000047,1.96e-10,33;CL:0000031,1.96e-10,33;CL:0000404,1.96e-10,33;CL:0000117,1.03e-07,23;CL:0000337,1.03e-07,23;CL:0000393,6.51e-07,39;CL:0000211,6.51e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.38e-11!73;UBERON:0005743!3.38e-11!73;UBERON:0000073!5.34e-10!75;UBERON:0001016!5.34e-10!75;UBERON:0000153!7.15e-09!94;UBERON:0002020!1.07e-08!34;UBERON:0001049!1.27e-08!52;UBERON:0005068!1.27e-08!52;UBERON:0006241!1.27e-08!52;UBERON:0007135!1.27e-08!52;UBERON:0000475!1.74e-08!200;UBERON:0002346!3.90e-08!71;UBERON:0003075!3.90e-08!71;UBERON:0007284!3.90e-08!71;UBERON:0007811!6.51e-08!86;UBERON:0003056!1.54e-07!49;UBERON:0000033!1.91e-07!63;UBERON:0000477!3.02e-07!154;UBERON:0002616!3.48e-07!49;UBERON:0004121!5.78e-07!102;UBERON:0000924!5.78e-07!102;UBERON:0006601!5.78e-07!102;UBERON:0000955!6.39e-07!50;UBERON:0006238!6.39e-07!50;UBERON:0002791!9.69e-07!29;UBERON:0003528!9.69e-07!29;UBERON:0001893!9.69e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.11e-11,73;UBERON:0002346,4.34e-11,64;UBERON:0003075,4.34e-11,64;UBERON:0007284,4.34e-11,64;UBERON:0001016,5.41e-10,75;UBERON:0004121,4.78e-09,95;UBERON:0000924,4.78e-09,95;UBERON:0006601,4.78e-09,95;UBERON:0000073,5.26e-09,54;UBERON:0010371,7.03e-09,73;UBERON:0002020,1.06e-08,34;UBERON:0001049,1.26e-08,52;UBERON:0005068,1.26e-08,52;UBERON:0006241,1.26e-08,52;UBERON:0007135,1.26e-08,52;UBERON:0003056,1.53e-07,49;UBERON:0003528,9.64e-07,29;UBERON:0002791,9.64e-07,29;UBERON:0001893,9.64e-07,29 | |||
|phase1_expression=4.64431656603902,0,0,0,0,0.503637815735669,0,21.5635950147432,20.4143647119917,14.5120006319636,2.05461561870606,1.67521533890206,21.7424927012631,21.5928393974924,7.32841475994458,12.5534665781692,9.79386629379405,4.57420139769445,7.95263714913285,6.36584477697045,4.76242424845991,2.78014663362479,2.61199789138935,0.799962113967033,0.91763712426868,0,0,0,0.380046838912748,0.504060259519861,0.443461021310609,3.17515336729816,2.46025915033828,15.8481681015439,0.866554859253824,1.49611180822643,1.42918549383658,10.0447591376858,6.2506827561904,7.32933241563318,8.82347232046521,16.3930916390027,10.1957174136542,4.78407908307194,3.54819259268301,5.50640256485045,4.69434806608824,1.09012578190223,3.29529274101708,1.74986909166855,3.91961980551015,0,5.87239121202077,26.8383992544197,25.2070349356848,0.514518872071894,0.573066879877513,2.06268836910977,8.49729135610311,9.52183762689659,9.50747105259269,2.37191172448392,2.66788438833342,5.39939830368839,1.97773272513395,3.5524005747305,2.69640099466564,6.14749288514487,8.8136170462206,9.31540974488665,7.36137364729837,10.8547374073445,9.49734726091938,8.45186514583183,6.51749202924007,13.7882817991503,5.50579404996943,13.4071704989447,11.0596703944495,8.17694983927202,9.33173964744578,6.25096044668112,8.37548997004143,9.56696437053856,7.94550888439413,12.6690291753677,9.96601765593721,8.38797506213853,0.908714319998209,1.73814588245607,20.8702431865208,8.60423876981386,12.9194553404473,1.07940638327563,9.09686984426737,6.72040330646003,3.5111105032938,0.852151612890289,1.03914401841148,1.41335829804136,3.94361575374705,1.28326477414318,5.09610479413291,0,4.76280290224671,6.33399663687746,4.04419556011827,4.45317130904334,10.0985774622397,2.82040064223167,4.16364784238726,3.65358573974569,0.691846491768175,2.41156224884196,5.05631440683531,2.38766523526383,0.741584903203122,6.07317299063629,6.19227386364912,3.72063754879041,5.96272099843063,5.33362778448744,3.72783522436244,7.90508151931177,8.16842156572475,1.27728527604296,8.14742846640258,8.99854096490112,7.24300294316469,13.0317856282196,13.2675174817402,11.5602003943835,7.99591872884472,9.71718737855256,12.0517065844545,13.6282660976916,4.48093200941392,4.22983700074316,3.53811861807145,7.99679052368601,7.41686524887411,5.0578462975364,5.22180176435513,6.32960234910003,7.96027040070536,7.68682321709099,11.7127155699661,11.1242449417777,6.25147179505242,11.7245769704048,11.4368230706567,5.2606975782618,4.72680323683516,9.05455632957633,4.7329891373827,3.38358253591438,4.91549231119264,4.88961023517959,5.96743348730745,2.27838349789052,3.28336483973535,2.70093092191522,4.02466050494857,3.14822770795846,4.01094493507183,4.41814495025775,4.82892122519315,5.83826711835847,4.60767579757745,6.23836363500562,6.89084881139774,7.45619935869195,6.14740322814942,6.71032093801859,8.20130799400096,7.51203670368776,2.64335026387038,0.793351699990633,6.82522401712749,6.73486348395272,5.54130083685001,4.03367049246685,3.7804267453628,1.90225626112559,1.42358718463353,2.30578536613615,3.01602250560323,2.58643413653496,3.70431765526328,1.79763881730844,2.16138049874694,1.7922714592893,3.98302592001472,4.79843752960861,9.01661885384643,6.72049381889537,4.84881217919064,7.43439690837377,6.63983639804701,7.23289725100051,7.37894020854462,7.89741849099523,5.92905254174298,6.50695912292767,5.30709286805648,6.2961391467759,7.50582449137461,7.71766911207734,5.85639459097266,9.78166867332756,9.07957269940198,5.76578967694971,5.75072826109418,8.93138274404408,6.24075346229121,6.31447194867779,5.02312757861354,3.85954817090694,9.60716588866344,6.06372517665551,5.37784422258685,2.71592137240301,3.75504397261603,5.86271901046355,8.56957107189649,10.5372169843211,7.88175720530955,8.41565820665345,10.2051051940792,11.1427054006702,8.63424909329478,8.24499633914616,7.53956419696361,2.71952841909355,6.39293554924747,6.34654516500885,8.18808008937739,8.67366480782304,0.983609672260053,4.03953483526997,9.14973836307144,13.6653560503823,11.4174400798383,7.64700153448166,8.24355094104858,7.92614286208731,10.5250782435473,10.5212108848072,9.09161889277004,4.4984984299053,4.11626247103979,3.20518086601059,6.8412522928502,5.27904393512113,2.65490276679926,4.61283208694465,6.04647113929502,5.46954731292105,4.13422650033082,3.99665692327106,4.9101375701962,3.63533729477506,6.06045543254026,4.74055136903724,3.16255825724996,1.03135543248187,6.46835250932197,3.78128297465751,3.10460841078611,4.71541477069503,5.14286677562593,6.59964625127661,8.06290200950393,3.65357938937519,2.11204537257339,0.847328283455281,1.10264199027481,3.95727007059552,5.9741837877485,2.5934557719107,3.58117032009409,4.10352249362653,2.04036585640896,10.3838169125885,9.91051108627546,9.08102219038179,5.92622487583077,7.34636982318295,10.3887613067979,8.92234875505438,8.83887835968048,10.636310376598,11.8851977471804,2.86401185404534,4.74503990371703,3.65975040828328,2.37611749807963,2.92723614420256,3.49380101993884,4.31565908431426,3.80205896336545,6.0203866656326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| |||
|short_description=p2@Pitpnc1 | |||
}} |
Latest revision as of 21:02, 26 September 2015
Short description: | p2@Pitpnc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Pitpnc1_5end |
Coexpression cluster: | NA |
Association with transcript: | -20bp_to_ENSMUST00000166405, NM_145823, uc007mal.1, uc007mam.1, uc007man.1, uc007mao.1, uc007map.1, uc011ygq.1_5end |
EntrezGene: | Pitpnc1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.96e-10 | 33 |
neuronal stem cell | 1.96e-10 | 33 |
neuroblast | 1.96e-10 | 33 |
electrically signaling cell | 1.96e-10 | 33 |
CNS neuron (sensu Vertebrata) | 1.03e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.03e-07 | 23 |
electrically responsive cell | 6.51e-07 | 39 |
electrically active cell | 6.51e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.11e-11 | 73 |
neurectoderm | 4.34e-11 | 64 |
neural plate | 4.34e-11 | 64 |
presumptive neural plate | 4.34e-11 | 64 |
nervous system | 5.41e-10 | 75 |
ectoderm-derived structure | 4.78e-09 | 95 |
ectoderm | 4.78e-09 | 95 |
presumptive ectoderm | 4.78e-09 | 95 |
regional part of nervous system | 5.26e-09 | 54 |
ecto-epithelium | 7.03e-09 | 73 |
gray matter | 1.06e-08 | 34 |
neural tube | 1.26e-08 | 52 |
neural rod | 1.26e-08 | 52 |
future spinal cord | 1.26e-08 | 52 |
neural keel | 1.26e-08 | 52 |
pre-chordal neural plate | 1.53e-07 | 49 |
brain grey matter | 9.64e-07 | 29 |
regional part of telencephalon | 9.64e-07 | 29 |
telencephalon | 9.64e-07 | 29 |