FFCP PHASE1:Mm9::chr7:54116623..54116651,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16833 | |EntrezGene=16833 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=P00342,Q548Z6 | |UniProt=P00342,Q548Z6 | ||
|association_with_transcript=0bp_to_NM_013580,uc009gzp.1_5end | |association_with_transcript=0bp_to_NM_013580,uc009gzp.1_5end | ||
|cluster_id=chr7:54116623..54116651,+ | |||
|description=CAGE_peak_1_at_Ldhc_5end | |description=CAGE_peak_1_at_Ldhc_5end | ||
|id=chr7:54116623..54116651,+ | |id=chr7:54116623..54116651,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003135!2.57e-32!15;UBERON:0004176!2.91e-32!17;UBERON:0009196!2.91e-32!17;UBERON:0009117!2.91e-32!17;UBERON:0000991!2.65e-30!18;UBERON:0005564!2.65e-30!18;UBERON:0003101!4.00e-30!16;UBERON:0000079!4.00e-30!16;UBERON:0000473!1.93e-29!14;UBERON:0003133!4.16e-29!24;UBERON:0005156!1.34e-26!26;UBERON:0000990!1.34e-26!26;UBERON:0003886!6.42e-15!38;UBERON:0002553!1.88e-14!39;UBERON:0002323!3.38e-13!37;UBERON:0004458!3.38e-13!37;UBERON:0000464!1.21e-11!57;UBERON:0000058!2.11e-08!6;UBERON:0000080!1.24e-07!4;UBERON:0005904!1.24e-07!4;UBERON:0006947!1.24e-07!4;UBERON:0002120!1.24e-07!4;UBERON:0004054!1.24e-07!4;UBERON:0004875!1.24e-07!4;UBERON:0004876!1.24e-07!4;UBERON:0005721!1.24e-07!4;UBERON:0005754!1.24e-07!4;UBERON:0007297!1.24e-07!4;UBERON:0000466!2.13e-07!79 | |ontology_enrichment_uberon=UBERON:0003135!2.57e-32!15;UBERON:0004176!2.91e-32!17;UBERON:0009196!2.91e-32!17;UBERON:0009117!2.91e-32!17;UBERON:0000991!2.65e-30!18;UBERON:0005564!2.65e-30!18;UBERON:0003101!4.00e-30!16;UBERON:0000079!4.00e-30!16;UBERON:0000473!1.93e-29!14;UBERON:0003133!4.16e-29!24;UBERON:0005156!1.34e-26!26;UBERON:0000990!1.34e-26!26;UBERON:0003886!6.42e-15!38;UBERON:0002553!1.88e-14!39;UBERON:0002323!3.38e-13!37;UBERON:0004458!3.38e-13!37;UBERON:0000464!1.21e-11!57;UBERON:0000058!2.11e-08!6;UBERON:0000080!1.24e-07!4;UBERON:0005904!1.24e-07!4;UBERON:0006947!1.24e-07!4;UBERON:0002120!1.24e-07!4;UBERON:0004054!1.24e-07!4;UBERON:0004875!1.24e-07!4;UBERON:0004876!1.24e-07!4;UBERON:0005721!1.24e-07!4;UBERON:0005754!1.24e-07!4;UBERON:0007297!1.24e-07!4;UBERON:0000466!2.13e-07!79 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,2.45e-23,15;UBERON:0003101,6.92e-22,16;UBERON:0000079,6.92e-22,16;UBERON:0000473,1.24e-17,14;UBERON:0003133,1.29e-14,24;UBERON:0004176,1.46e-14,17;UBERON:0009196,1.46e-14,17;UBERON:0009117,1.46e-14,17;UBERON:0000991,9.14e-14,18;UBERON:0005564,9.14e-14,18;UBERON:0001301,1.40e-13,3;UBERON:0006555,1.40e-13,3;UBERON:0005103,1.40e-13,3;UBERON:0000083,1.40e-13,3;UBERON:0009201,1.40e-13,3;UBERON:0004819,1.40e-13,3;UBERON:0006553,1.40e-13,3;UBERON:0003074,1.40e-13,3;UBERON:0003060,1.40e-13,3;UBERON:0005156,1.71e-13,26;UBERON:0000990,1.71e-13,26;UBERON:0000080,1.97e-10,4;UBERON:0005904,1.97e-10,4;UBERON:0006947,1.97e-10,4;UBERON:0002120,1.97e-10,4;UBERON:0004054,1.97e-10,4;UBERON:0004875,1.97e-10,4;UBERON:0004876,1.97e-10,4;UBERON:0005721,1.97e-10,4;UBERON:0005754,1.97e-10,4;UBERON:0007297,1.97e-10,4;UBERON:0003886,3.20e-09,38;UBERON:0002553,5.53e-09,39;UBERON:0002323,9.39e-07,37;UBERON:0004458,9.39e-07,37 | |||
|phase1_expression=0,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,550.400173857724,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,65.4470997813964,0,0,0,0.281686839553361,0,0,0,0,0,0,65.6557308384595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49288364732112,5.30717792710717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4694.99848630062,0.448549638131936,0.165458490457098,0.194451188344048,1.6790777052105,0.675824501963113,0.352071715937262,0,0.314578033277133,1083.02161366299,2028.8833640804,0,0,0,0,0,0,0,0,0,0.0762068066549998,0.100826185136841,0,0.0962118416403295,0,0,0.443971906748129,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,550.400173857724,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,65.4470997813964,0,0,0,0.281686839553361,0,0,0,0,0,0,65.6557308384595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49288364732112,5.30717792710717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4694.99848630062,0.448549638131936,0.165458490457098,0.194451188344048,1.6790777052105,0.675824501963113,0.352071715937262,0,0.314578033277133,1083.02161366299,2028.8833640804,0,0,0,0,0,0,0,0,0,0.0762068066549998,0.100826185136841,0,0.0962118416403295,0,0,0.443971906748129,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@Ldhc | |short_description=p1@Ldhc | ||
}} | }} |
Latest revision as of 22:40, 26 September 2015
Short description: | p1@Ldhc |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ldhc_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_NM_013580, uc009gzp.1_5end |
EntrezGene: | Ldhc |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 2.45e-23 | 15 |
male organism | 6.92e-22 | 16 |
male reproductive system | 6.92e-22 | 16 |
testis | 1.24e-17 | 14 |
reproductive organ | 1.29e-14 | 24 |
external genitalia | 1.46e-14 | 17 |
indifferent external genitalia | 1.46e-14 | 17 |
indifferent gonad | 1.46e-14 | 17 |
gonad | 9.14e-14 | 18 |
gonad primordium | 9.14e-14 | 18 |
epididymis | 1.40e-13 | 3 |
excretory tube | 1.40e-13 | 3 |
mesonephric epithelium | 1.40e-13 | 3 |
mesonephric tubule | 1.40e-13 | 3 |
nephric duct | 1.40e-13 | 3 |
kidney epithelium | 1.40e-13 | 3 |
renal duct | 1.40e-13 | 3 |
mesonephric duct | 1.40e-13 | 3 |
pronephric duct | 1.40e-13 | 3 |
reproductive structure | 1.71e-13 | 26 |
reproductive system | 1.71e-13 | 26 |
mesonephros | 1.97e-10 | 4 |
duct of male reproductive system | 1.97e-10 | 4 |
male genital duct | 1.97e-10 | 4 |
pronephros | 1.97e-10 | 4 |
internal male genitalia | 1.97e-10 | 4 |
nephrogenic cord | 1.97e-10 | 4 |
urogenital ridge | 1.97e-10 | 4 |
pronephric mesoderm | 1.97e-10 | 4 |
rostral part of nephrogenic cord | 1.97e-10 | 4 |
presumptive pronephric mesoderm | 1.97e-10 | 4 |
body cavity precursor | 3.20e-09 | 38 |
anatomical cavity | 5.53e-09 | 39 |
body cavity | 9.39e-07 | 37 |
body cavity or lining | 9.39e-07 | 37 |