Personal tools

FFCP PHASE1:Mm9::chr12:99975758..99975777,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{FFCP|EntrezGene=24000|HGNC=|UniProt=G5E8J4,Q4KML9|association_with_transcript=-143bp_to_ENSMUST00000170188,NM_001146199,uc007ore.2_5end|description=CAGE_peak_3_at_Ptpn21_5end|id=chr12:99975758..99975777,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!3.39e-07!23;UBERON:0001009!3.39e-07!23;UBERON:0005178!5.04e-07!17;UBERON:0005181!5.04e-07!17;UBERON:0002224!5.04e-07!17;UBERON:0000915!5.04e-07!17;UBERON:0008947!5.04e-07!17;UBERON:0003258!5.04e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0004535,1.08e-08,23;UBERON:0001009,1.08e-08,23;UBERON:0005178,7.59e-08,17;UBERON:0005181,7.59e-08,17;UBERON:0002224,7.59e-08,17;UBERON:0000915,7.59e-08,17;UBERON:0008947,7.59e-08,17;UBERON:0003258,7.59e-08,17;UBERON:0007100,2.56e-07,18;UBERON:0000948,2.56e-07,18;UBERON:0005498,2.56e-07,18;UBERON:0004140,2.56e-07,18;UBERON:0009881,2.56e-07,18;UBERON:0004141,2.56e-07,18;UBERON:0003084,2.56e-07,18;UBERON:0007005,2.56e-07,18;UBERON:0004139,2.56e-07,18;UBERON:0004291,2.56e-07,18;UBERON:0002048,2.89e-07,14;UBERON:0000117,2.89e-07,14;UBERON:0000171,2.89e-07,14;UBERON:0000170,2.89e-07,14;UBERON:0005597,2.89e-07,14;UBERON:0000118,2.89e-07,14|phase1_expression=0.480446541314382,2.79180326111489,2.27499619694768,0.90739263392049,0.500895729946347,1.00727563147134,0.233612640595526,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,1.53077922271926,0,0,0.319984845586813,0.91763712426868,2.29692785646008,0.430761996159075,0.430942465371778,0.190023419456374,1.26015064879965,0.221730510655305,0,0,0,0.577703239502549,0.498703936075477,0.612508068787107,0,0,0,0,0,0,1.00717454380462,1.82478476195126,1.10128051297009,0.782391344348039,0.872100625521786,0.878744730937887,1.74986909166855,1.39986421625363,0,0,0,0,1.28629718017973,2.29226751951005,0,0.606949382578793,0,0,1.0165335962074,0,2.2497492932035,0,0,0.599200221036809,0.768436610643109,0.725827286159344,0.135005938331691,0,0.285650984403804,0.662605622854841,0.61245399607477,0.383381884072945,0,0,0.255374676170375,0,0,0.0914876436024097,0.52091337055676,0,0,0.30559649555362,0,0.142371680799103,0,3.93776205332557,3.47629176491213,5.2175607966302,0,5.439770669662,0,0.649776417447669,0.448026887097336,0.421333260395256,0.170430322578058,1.29893002301434,1.06001872353102,0.422530259330042,0,2.54805239706646,0,1.5154372870785,1.26679932737549,2.02209778005913,1.37020655662872,0.258937883647172,1.1875371125186,0.520455980298408,0.608930956624282,0.922461989024234,1.05505848386836,1.99900802130698,1.13099932196708,1.23597483867187,2.16899035379867,0.884610551949874,2.75003644910596,0.883366073841574,1.45462575940567,0,2.34224637609238,0.209446706813455,1.53274233125155,0.239630249011841,0,0,0.299581278809645,0,0.251308704225729,0.347648640384553,0.511430914660661,0,0.324482526135515,3.05518091550949,0.870848794270651,1.51633655060205,1.47309299120532,1.17108398666433,0,1.80062129805349,2.56198190320716,3.12967896096108,2.8185018462667,3.65436725782942,3.10444044886819,0.215567992932842,0.567318240503458,0.527853372491847,0.43839146485515,0.556094498451196,1.39300866608867,0.61734640922383,0.59710280045548,0,0,0,1.03562886267751,1.64168241986767,1.98068267607116,1.89395788468168,1.77087808572663,2.93107514486019,1.62773761325285,1.87791380979733,1.63471479314037,3.29119699826961,1.64167464079095,2.75633952455909,2.77779976108131,3.07370161407471,2.01309628140558,0.210289948564127,0.308713837137853,0.991256348951394,0,1.06644125267617,2.09013004674395,1.67527699718721,1.61346819698674,0.22237804384487,0.951128130562796,0,0.823494773620054,1.75934646160189,1.79060824837036,1.16978452271472,0,1.08069024937347,0.398282546508734,0.189667900953082,1.02823661348756,1.1270773567308,1.01825663922657,0.969762435838129,1.61312385747733,2.27651533647326,1.77132177575523,1.09899109488962,1.60416313098341,0.889357881261447,0.500535317148282,0,0.674586337154561,0.608580364165509,0.482354319504834,1.52775511068852,0,1.13494658742525,0.823684239564244,0,0.744281895337007,0.936113019343682,2.27320990152401,1.61457672169721,1.4473305640901,2.95605104266567,0.568474235311454,1.14075483509418,1.69745085775188,2.34690248288502,1.17254380209271,1.90434912708811,4.48807390072937,2.83743259391144,3.98636441367795,2.71073106717728,3.11340297959902,3.45369963731791,3.32692834737477,0,0,0.491764273019036,0.827810238914197,0.321101179975584,0.234423373184406,1.96721934452011,0.504941854408746,0.94652465824877,1.56175497718655,0.430846795465598,1.91175038362042,1.55959071857676,1.69845918473299,1.61924280669958,1.16902343164525,0,0,1.27746076687442,0.890328018336276,1.62886959353576,2.47455184458803,2.65490276679926,2.91336763385978,1.209294227859,1.13163047853539,2.06711325016541,2.76691633149535,3.10113951801865,0.727067458955011,1.42598951353889,1.58018378967908,1.05418608574999,0,0.340439605753788,1.62054984628179,0.517434735131018,0.857348140126369,0.709360934569094,0.178368817602071,0.329098041204242,0.608929898229199,0.938686832254841,0.847328283455281,1.10264199027481,1.97863503529776,1.93757312035087,2.47282992205439,1.07435109602823,1.47726809770555,0.582961673259701,0.370850604021019,0.341741761595705,0.619160603889667,0.925972636848558,0.188368457004691,0.410082683163076,0,0.169978429993855,0.419854356970974,0.138199973804424,0.954670618015114,0.790839983952838,1.01659733563424,1.08005340821801,0.418176592028937,1.31017538247707,1.75323650300267,2.14898984885873,2.35580347785627,0.90730481304255,1.24267862617385,0,1.79419855252775,0.827292452285488,1.36115831840833,1.42075805825504,0.337912250981556,2.22978753426933,1.43224823328345,1.67774951081137,0,0,0,0,0.205421914329655,0.25984164595559,0.179026695667481,0.198681354781265,0.360586348559907,0.147689527174577,0.302899349844443,0.0762068066549998,0,0,0.0962118416403295,0.116876902181569,1.81384306892169,0.887943813496259,0.897138566094757,0.839423081820392,3.67060228661162,1.87682475451182,1.46521299413812,1.92931541171159,2.00628841614145,0,0.920650473014354,0,0,0,0.755393897389701,0.675022500231806,0,0,0,0.518936737920883,0.399024873401031,0.512200817262403,1.21553358534147,1.25767897576789,1.65459157605013,1.33348036680969,0.824140228955577,1.60459604795908,1.51618327058278,0.50695859978048,1.50901073108861,1.591905626988,1.92075457214608,1.95280594449085,0,1.62238056322798,1.35036454324594,1.64834360321323,1.76638704161277,0.685738504770831,1.06485483695602,1.43061713968393,1.0174249164263,1.69396884747595,1.60767754994185,1.46342378298218,0.789209134313529,2.03706170768793,0.561142271657738,2.25406534435931,2.36410757701352,0.818462086339379,1.85924209423159,0.771626443924566,0.999242311751784,2.10538447600868,0.859484216193193,2.10417165275728,1.54413993383661,1.15933917810211|short_description=p3@Ptpn21}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=24000
|HGNC=
|TSSclassifier=NA
|UniProt=G5E8J4,Q4KML9
|association_with_transcript=-143bp_to_ENSMUST00000170188,NM_001146199,uc007ore.2_5end
|cluster_id=chr12:99975758..99975777,-
|description=CAGE_peak_3_at_Ptpn21_5end
|id=chr12:99975758..99975777,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004535!3.39e-07!23;UBERON:0001009!3.39e-07!23;UBERON:0005178!5.04e-07!17;UBERON:0005181!5.04e-07!17;UBERON:0002224!5.04e-07!17;UBERON:0000915!5.04e-07!17;UBERON:0008947!5.04e-07!17;UBERON:0003258!5.04e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0004535,1.08e-08,23;UBERON:0001009,1.08e-08,23;UBERON:0005178,7.59e-08,17;UBERON:0005181,7.59e-08,17;UBERON:0002224,7.59e-08,17;UBERON:0000915,7.59e-08,17;UBERON:0008947,7.59e-08,17;UBERON:0003258,7.59e-08,17;UBERON:0007100,2.56e-07,18;UBERON:0000948,2.56e-07,18;UBERON:0005498,2.56e-07,18;UBERON:0004140,2.56e-07,18;UBERON:0009881,2.56e-07,18;UBERON:0004141,2.56e-07,18;UBERON:0003084,2.56e-07,18;UBERON:0007005,2.56e-07,18;UBERON:0004139,2.56e-07,18;UBERON:0004291,2.56e-07,18;UBERON:0002048,2.89e-07,14;UBERON:0000117,2.89e-07,14;UBERON:0000171,2.89e-07,14;UBERON:0000170,2.89e-07,14;UBERON:0005597,2.89e-07,14;UBERON:0000118,2.89e-07,14
|phase1_expression=0.480446541314382,2.79180326111489,2.27499619694768,0.90739263392049,0.500895729946347,1.00727563147134,0.233612640595526,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,1.53077922271926,0,0,0.319984845586813,0.91763712426868,2.29692785646008,0.430761996159075,0.430942465371778,0.190023419456374,1.26015064879965,0.221730510655305,0,0,0,0.577703239502549,0.498703936075477,0.612508068787107,0,0,0,0,0,0,1.00717454380462,1.82478476195126,1.10128051297009,0.782391344348039,0.872100625521786,0.878744730937887,1.74986909166855,1.39986421625363,0,0,0,0,1.28629718017973,2.29226751951005,0,0.606949382578793,0,0,1.0165335962074,0,2.2497492932035,0,0,0.599200221036809,0.768436610643109,0.725827286159344,0.135005938331691,0,0.285650984403804,0.662605622854841,0.61245399607477,0.383381884072945,0,0,0.255374676170375,0,0,0.0914876436024097,0.52091337055676,0,0,0.30559649555362,0,0.142371680799103,0,3.93776205332557,3.47629176491213,5.2175607966302,0,5.439770669662,0,0.649776417447669,0.448026887097336,0.421333260395256,0.170430322578058,1.29893002301434,1.06001872353102,0.422530259330042,0,2.54805239706646,0,1.5154372870785,1.26679932737549,2.02209778005913,1.37020655662872,0.258937883647172,1.1875371125186,0.520455980298408,0.608930956624282,0.922461989024234,1.05505848386836,1.99900802130698,1.13099932196708,1.23597483867187,2.16899035379867,0.884610551949874,2.75003644910596,0.883366073841574,1.45462575940567,0,2.34224637609238,0.209446706813455,1.53274233125155,0.239630249011841,0,0,0.299581278809645,0,0.251308704225729,0.347648640384553,0.511430914660661,0,0.324482526135515,3.05518091550949,0.870848794270651,1.51633655060205,1.47309299120532,1.17108398666433,0,1.80062129805349,2.56198190320716,3.12967896096108,2.8185018462667,3.65436725782942,3.10444044886819,0.215567992932842,0.567318240503458,0.527853372491847,0.43839146485515,0.556094498451196,1.39300866608867,0.61734640922383,0.59710280045548,0,0,0,1.03562886267751,1.64168241986767,1.98068267607116,1.89395788468168,1.77087808572663,2.93107514486019,1.62773761325285,1.87791380979733,1.63471479314037,3.29119699826961,1.64167464079095,2.75633952455909,2.77779976108131,3.07370161407471,2.01309628140558,0.210289948564127,0.308713837137853,0.991256348951394,0,1.06644125267617,2.09013004674395,1.67527699718721,1.61346819698674,0.22237804384487,0.951128130562796,0,0.823494773620054,1.75934646160189,1.79060824837036,1.16978452271472,0,1.08069024937347,0.398282546508734,0.189667900953082,1.02823661348756,1.1270773567308,1.01825663922657,0.969762435838129,1.61312385747733,2.27651533647326,1.77132177575523,1.09899109488962,1.60416313098341,0.889357881261447,0.500535317148282,0,0.674586337154561,0.608580364165509,0.482354319504834,1.52775511068852,0,1.13494658742525,0.823684239564244,0,0.744281895337007,0.936113019343682,2.27320990152401,1.61457672169721,1.4473305640901,2.95605104266567,0.568474235311454,1.14075483509418,1.69745085775188,2.34690248288502,1.17254380209271,1.90434912708811,4.48807390072937,2.83743259391144,3.98636441367795,2.71073106717728,3.11340297959902,3.45369963731791,3.32692834737477,0,0,0.491764273019036,0.827810238914197,0.321101179975584,0.234423373184406,1.96721934452011,0.504941854408746,0.94652465824877,1.56175497718655,0.430846795465598,1.91175038362042,1.55959071857676,1.69845918473299,1.61924280669958,1.16902343164525,0,0,1.27746076687442,0.890328018336276,1.62886959353576,2.47455184458803,2.65490276679926,2.91336763385978,1.209294227859,1.13163047853539,2.06711325016541,2.76691633149535,3.10113951801865,0.727067458955011,1.42598951353889,1.58018378967908,1.05418608574999,0,0.340439605753788,1.62054984628179,0.517434735131018,0.857348140126369,0.709360934569094,0.178368817602071,0.329098041204242,0.608929898229199,0.938686832254841,0.847328283455281,1.10264199027481,1.97863503529776,1.93757312035087,2.47282992205439,1.07435109602823,1.47726809770555,0.582961673259701,0.370850604021019,0.341741761595705,0.619160603889667,0.925972636848558,0.188368457004691,0.410082683163076,0,0.169978429993855,0.419854356970974,0.138199973804424,0.954670618015114,0.790839983952838,1.01659733563424,1.08005340821801,0.418176592028937,1.31017538247707,1.75323650300267,2.14898984885873,2.35580347785627,0.90730481304255,1.24267862617385,0,1.79419855252775,0.827292452285488,1.36115831840833,1.42075805825504,0.337912250981556,2.22978753426933,1.43224823328345,1.67774951081137,0,0,0,0,0.205421914329655,0.25984164595559,0.179026695667481,0.198681354781265,0.360586348559907,0.147689527174577,0.302899349844443,0.0762068066549998,0,0,0.0962118416403295,0.116876902181569,1.81384306892169,0.887943813496259,0.897138566094757,0.839423081820392,3.67060228661162,1.87682475451182,1.46521299413812,1.92931541171159,2.00628841614145,0,0.920650473014354,0,0,0,0.755393897389701,0.675022500231806,0,0,0,0.518936737920883,0.399024873401031,0.512200817262403,1.21553358534147,1.25767897576789,1.65459157605013,1.33348036680969,0.824140228955577,1.60459604795908,1.51618327058278,0.50695859978048,1.50901073108861,1.591905626988,1.92075457214608,1.95280594449085,0,1.62238056322798,1.35036454324594,1.64834360321323,1.76638704161277,0.685738504770831,1.06485483695602,1.43061713968393,1.0174249164263,1.69396884747595,1.60767754994185,1.46342378298218,0.789209134313529,2.03706170768793,0.561142271657738,2.25406534435931,2.36410757701352,0.818462086339379,1.85924209423159,0.771626443924566,0.999242311751784,2.10538447600868,0.859484216193193,2.10417165275728,1.54413993383661,1.15933917810211
|short_description=p3@Ptpn21
}}

Latest revision as of 00:32, 27 September 2015

Short description:p3@Ptpn21
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Ptpn21_5end
Coexpression cluster:NA
Association with transcript: -143bp_to_ENSMUST00000170188, NM_001146199, uc007ore.2_5end
EntrezGene:Ptpn21
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Ptpn21

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.79
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.53
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C11.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.82
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.10
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D93.94
Mouse Schwann, donor2.CNhs12573.11746-123F93.48
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.22
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C45.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.37
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C12.00
adrenal gland, neonate N25.CNhs11223.1377-27I31.13
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H12.17
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F52.75
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H71.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.06
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B21.52
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D42.56
eyeball, neonate N00.CNhs11207.633-15C63.13
eyeball, neonate N01.CNhs11140.1532-43E72.82
eyeball, neonate N02.CNhs11205.1551-44G83.65
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I91.98
heart, embryo E14.CNhs10597.403-26D41.89
heart, embryo E15.CNhs11017.431-16C81.77
heart, embryo E16.CNhs11021.457-17C62.93
heart, embryo E17.CNhs11025.479-18E51.63
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E31.63
heart, neonate N03.CNhs11221.1349-25I23.29
heart, neonate N10.CNhs11118.749-24G11.64
heart, neonate N16.CNhs11209.782-15G12.76
heart, neonate N20.CNhs11127.821-26I62.78
heart, neonate N25.CNhs11196.1351-25D33.07
heart, neonate N30.CNhs11202.1390-42D22.01
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D52.09
intestine, embryo E15.CNhs10602.976-16D81.68
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B81.76
intestine, neonate N07.CNhs11095.720-20F21.79
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G71.61
kidney, neonate N10.CNhs11206.758-6D52.28
kidney, neonate N20.CNhs11113.832-19I11.77
kidney, neonate N25.CNhs11122.1353-25F31.10
kidney, neonate N30.CNhs11203.1385-42H11.60
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F41.13
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A32.27
liver, neonate N25.CNhs11198.1368-26H11.61
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B12.96
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F81.14
lung, embryo E15.CNhs11020.432-17C51.70
lung, embryo E16.CNhs10998.458-17B62.35
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I61.90
lung, neonate N00.CNhs11224.640-42C64.49
lung, neonate N06.CNhs11212.683-20E52.84
lung, neonate N07.CNhs11111.715-19A33.99
lung, neonate N10.CNhs11219.750-23E62.71
lung, neonate N20.CNhs11109.822-18A43.11
lung, neonate N25.CNhs11119.1359-25C73.45
lung, neonate N30.CNhs11133.1394-42H23.33
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.97
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.91
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I71.28
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I41.63
oviduct, adult pregnant day01.CNhs10500.988-6G62.47
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F42.91
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I72.77
pancreas, neonate N00.CNhs11105.645-26G93.10
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C31.98
skin, neonate N00.CNhs11124.650-25G41.94
skin, neonate N03.CNhs11215.662-22H32.47
skin, neonate N06.CNhs11097.693-20I51.07
skin, neonate N10.CNhs11108.762-6C41.48
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B81.75
stomach, neonate N07.CNhs11210.718-18A92.15
stomach, neonate N25.CNhs11104.1355-25E42.36
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.79
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G51.36
testis, embryo E17.CNhs11029.486-18I51.42
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B72.23
testis, neonate N07.CNhs11222.726-26I41.43
testis, neonate N10.CNhs11204.763-44D91.68
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B41.81
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.90
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.84
urinary bladder, adult.CNhs10481.879-12E43.67
uterus, adult pregnant day19.CNhs10497.590-15F51.88
uterus, adult.CNhs10509.92-27E51.47
vagina, adult.CNhs10502.89-27D51.93
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.92
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.61
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.04
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.36
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.86
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B32.11
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C62.10
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
cardiovascular system1.08e-0823
circulatory system1.08e-0823
thoracic cavity element7.59e-0817
thoracic segment organ7.59e-0817
thoracic cavity7.59e-0817
thoracic segment of trunk7.59e-0817
respiratory primordium7.59e-0817
endoderm of foregut7.59e-0817
primary circulatory organ2.56e-0718
heart2.56e-0718
primitive heart tube2.56e-0718
primary heart field2.56e-0718
anterior lateral plate mesoderm2.56e-0718
heart tube2.56e-0718
heart primordium2.56e-0718
cardiac mesoderm2.56e-0718
cardiogenic plate2.56e-0718
heart rudiment2.56e-0718
lung2.89e-0714
respiratory tube2.89e-0714
respiration organ2.89e-0714
pair of lungs2.89e-0714
lung primordium2.89e-0714
lung bud2.89e-0714
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr12:99975758..99975777,-&oldid=4282854"