FFCP PHASE1:Mm9::chr11:119129271..119129282,+: Difference between revisions
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{{FFCP|EntrezGene=14387|HGNC=|UniProt=A2AFL4,P70699|association_with_transcript=0bp_to_NM_001159324,uc007mqg.2_5end|description=CAGE_peak_2_at_Gaa_5end|id=chr11:119129271..119129282,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!3.93e-10!50;UBERON:0006238!3.93e-10!50;UBERON:0004111!6.19e-10!122;UBERON:0002616!7.31e-10!49;UBERON:0007023!1.85e-09!51;UBERON:0000025!1.06e-08!114;UBERON:0001049!1.36e-08!52;UBERON:0005068!1.36e-08!52;UBERON:0006241!1.36e-08!52;UBERON:0007135!1.36e-08!52;UBERON:0000033!1.46e-07!63;UBERON:0001017!1.97e-07!73;UBERON:0005743!1.97e-07!73;UBERON:0002791!3.02e-07!29;UBERON:0003528!3.02e-07!29;UBERON:0001893!3.02e-07!29;UBERON:0002619!3.49e-07!17;UBERON:0002020!8.57e-07!34|ontology_enrichment_uberon_v019_2=UBERON:0004111,2.90e-10,122;UBERON:0007023,3.76e-10,51;UBERON:0000073,1.34e-09,54;UBERON:0000025,5.51e-09,114;UBERON:0000955,1.14e-08,47;UBERON:0006238,1.14e-08,47;UBERON:0001049,1.23e-08,52;UBERON:0005068,1.23e-08,52;UBERON:0006241,1.23e-08,52;UBERON:0007135,1.23e-08,52;UBERON:0002616,2.11e-08,46;UBERON:0001017,1.61e-07,73;UBERON:0002619,3.85e-07,17;UBERON:0003528,4.48e-07,29;UBERON:0002791,4.48e-07,29;UBERON:0001893,4.48e-07,29;UBERON:0001016,9.41e-07,75|phase1_expression=0.640595388419176,0.348975407639361,0.909998478779072,0,0,0.839396359559449,0.700837921786577,0.645616617207881,0.703943610758334,0.468129052643987,0.34243593645101,0.478632953972018,2.05440875917447,1.04904482902797,0,0,1.39912375625629,1.10411757875383,0.411343300817216,0,1.7008658030214,0.794327609607082,0.522399578277871,0.639969691173627,0.22940928106717,1.14846392823004,0,0.430942465371778,0.190023419456374,1.00812051903972,0.665191531965914,1.27006134691926,2.46025915033828,0,0.866554859253824,0.831173226792462,1.02084678131185,0.418531630736908,0.7813353445238,0,0,0,0.485510353031154,3.9028013572429,5.27160042341476,3.30384153891027,9.38869613217647,1.96222640742402,5.05278220289285,7.58276606389705,2.79972843250725,1.43752564364972,0.838913030288682,0.725362142011344,1.00828139742739,2.82985379639542,2.57880095944881,4.12537673821954,0.809265843438391,2.11596391708813,1.90149421051854,2.71075625655306,5.33576877666684,3.1496490104849,6.92206453796882,0.7104801149461,4.79360176829448,4.2264013585371,1.34796496001021,1.08004750665353,0.841299845405528,1.14260393761521,3.53389665522582,1.5923803897944,1.82106394934649,0.919218786610021,6.60695285996332,5.61824287574826,7.52672012955593,0.923204014111357,1.55528994124096,0,7.81712397203867,2.8138130501584,4.43114918552749,2.06240009831567,1.85083185038834,0.559198337475902,0.075726193333184,0.68014404096107,1.73918693221007,3.44169550792555,4.75979933595425,3.77792234146472,12.9955283489534,6.72040330646003,3.5111105032938,0.681721290312231,0.779358013808606,0.70667914902068,1.12674735821344,0,5.09610479413291,7.11066703153331,1.5154372870785,1.77351905832569,1.51657333504435,1.7127581957859,1.8125651855302,1.92974780784272,0.346970653532272,0.304465478312141,0.691846491768175,1.20578112442098,1.29347577849275,2.01066546127481,2.96633961281249,3.61498392299779,2.65383165584962,0.970601099684455,0.883366073841574,1.45462575940567,1.86391761218122,3.80615036115011,2.72280718857492,1.27728527604296,0.599075622529601,0,0.635351135365324,5.84183493678809,9.60751265919116,9.42407640846483,6.77914848749878,2.30143911597297,4.98691306942944,5.02947915510049,1.2220723662038,1.49288364732112,3.0326731012041,8.62811609134543,0.260240885925407,0.229902104433473,0.540186389416048,0.90422890701429,0.816437989815934,0.768682321709099,0.655912071918102,3.88055056108524,0.215567992932842,0.567318240503458,0.703804496655795,0.219195732427575,1.94633074457919,3.1342694986995,2.05782136407943,0.398068533636986,0.702213187313235,0.772043721344145,0.852490498186778,0.828503090142008,1.17263029990548,1.62055855314913,1.65721314909647,0.787056926989615,2.31400669331067,1.16266972375204,1.3413670069981,0.350296027101508,1.15191894939436,1.47750717671186,1.13496333364198,1.60819986167866,2.85415149878366,1.20785776884335,7.36014819974445,3.08713837137853,1.98251269790279,1.32225283331772,0.853153002140936,0,1.54640953586512,2.21851877085677,4.22518283305254,7.41879941838981,0.949058123089023,10.8701310117847,5.52937459360593,6.16765063327568,7.01870713628832,0.898819408654221,3.02593269824572,1.59313018603494,0.758671603812327,0.456994050438915,0,0.610953983535943,0.969762435838129,1.61312385747733,2.65593455921881,2.06654207171443,2.82597710114475,2.83813477020141,5.33614728756868,0.667380422864376,0.196558995113203,0.899448449539415,0.405720242777006,0.72353147925725,0.50925170356284,1.15078454980324,2.2698931748505,2.47105271869273,0,4.09355042435354,2.80833905803104,4.54641980304801,2.51156378930677,5.78932225636041,2.21703828199926,0.189491411770485,0.325929952884052,0.339490171550376,0.704070744865506,0.670025029767263,2.14239276797412,2.14647012643579,1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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14387 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=A2AFL4,P70699 | |||
|association_with_transcript=0bp_to_NM_001159324,uc007mqg.2_5end | |||
|cluster_id=chr11:119129271..119129282,+ | |||
|description=CAGE_peak_2_at_Gaa_5end | |||
|id=chr11:119129271..119129282,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!3.93e-10!50;UBERON:0006238!3.93e-10!50;UBERON:0004111!6.19e-10!122;UBERON:0002616!7.31e-10!49;UBERON:0007023!1.85e-09!51;UBERON:0000025!1.06e-08!114;UBERON:0001049!1.36e-08!52;UBERON:0005068!1.36e-08!52;UBERON:0006241!1.36e-08!52;UBERON:0007135!1.36e-08!52;UBERON:0000033!1.46e-07!63;UBERON:0001017!1.97e-07!73;UBERON:0005743!1.97e-07!73;UBERON:0002791!3.02e-07!29;UBERON:0003528!3.02e-07!29;UBERON:0001893!3.02e-07!29;UBERON:0002619!3.49e-07!17;UBERON:0002020!8.57e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,2.90e-10,122;UBERON:0007023,3.76e-10,51;UBERON:0000073,1.34e-09,54;UBERON:0000025,5.51e-09,114;UBERON:0000955,1.14e-08,47;UBERON:0006238,1.14e-08,47;UBERON:0001049,1.23e-08,52;UBERON:0005068,1.23e-08,52;UBERON:0006241,1.23e-08,52;UBERON:0007135,1.23e-08,52;UBERON:0002616,2.11e-08,46;UBERON:0001017,1.61e-07,73;UBERON:0002619,3.85e-07,17;UBERON:0003528,4.48e-07,29;UBERON:0002791,4.48e-07,29;UBERON:0001893,4.48e-07,29;UBERON:0001016,9.41e-07,75 | |||
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| |||
|short_description=p2@Gaa | |||
}} |
Latest revision as of 02:08, 27 September 2015
Short description: | p2@Gaa |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gaa_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001159324, uc007mqg.2_5end |
EntrezGene: | Gaa |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 2.90e-10 | 122 |
adult organism | 3.76e-10 | 51 |
regional part of nervous system | 1.34e-09 | 54 |
tube | 5.51e-09 | 114 |
brain | 1.14e-08 | 47 |
future brain | 1.14e-08 | 47 |
neural tube | 1.23e-08 | 52 |
neural rod | 1.23e-08 | 52 |
future spinal cord | 1.23e-08 | 52 |
neural keel | 1.23e-08 | 52 |
regional part of brain | 2.11e-08 | 46 |
central nervous system | 1.61e-07 | 73 |
regional part of cerebral cortex | 3.85e-07 | 17 |
brain grey matter | 4.48e-07 | 29 |
regional part of telencephalon | 4.48e-07 | 29 |
telencephalon | 4.48e-07 | 29 |
nervous system | 9.41e-07 | 75 |