FFCP PHASE1:Mm9::chr11:120624106..120624107,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=111241,15361 | |EntrezGene=111241,15361 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=64 | |||
|TSSclassifier=NA | |||
|UniProt=P17095 | |UniProt=P17095 | ||
|association_with_transcript=0bp_to_ENSMUST00000046355,ENSMUST00000105046_5end | |association_with_transcript=0bp_to_ENSMUST00000046355,ENSMUST00000105046_5end | ||
|cluster_id=chr11:120624106..120624107,+ | |||
|description=CAGE_peak_13_at_Hmga1-rs1_5end,CAGE_peak_14_at_Hmga1_5end | |description=CAGE_peak_13_at_Hmga1-rs1_5end,CAGE_peak_14_at_Hmga1_5end | ||
|id=chr11:120624106..120624107,+ | |id=chr11:120624106..120624107,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000219,1.16e-09,54;CL:0000764,3.68e-09,3;CL:0000765,3.68e-09,3;CL:0000038,3.68e-09,3;CL:0000547,3.68e-09,3;CL:0000068,1.34e-08,3;CL:0002202,1.34e-08,3;CL:0000069,1.34e-08,3;CL:0002632,1.34e-08,3;CL:0002368,1.34e-08,3;CL:0000307,1.34e-08,3;CL:0000377,1.34e-08,3;CL:0000349,1.42e-08,3;CL:0000351,1.42e-08,3;CL:0002320,2.64e-07,46;CL:0000134,2.64e-07,46;CL:0000217,3.73e-07,2;CL:0000328,3.73e-07,2;CL:0002573,3.73e-07,2;CL:0002376,3.73e-07,2;CL:0000218,3.73e-07,2;CL:0000692,3.73e-07,2;CL:0002377,3.73e-07,2;CL:0002375,3.73e-07,2;CL:0000708,4.85e-07,2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:2531,3.68e-09,3;DOID:0060083,3.68e-09,3;DOID:1240,3.68e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0000072!6.16e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.34e-08,3;UBERON:0001005,1.34e-08,3;UBERON:0007196,1.34e-08,3;UBERON:0001558,1.34e-08,3;UBERON:0000358,1.42e-08,3;UBERON:0000307,1.42e-08,3;UBERON:0007010,1.42e-08,3;UBERON:0002384,2.64e-07,46;UBERON:0003210,4.85e-07,2 | |||
|phase1_expression=0,0.348975407639361,0,0,0,0.16787927191189,0.233612640595526,0.129123323441576,1.12630977721333,1.40438715793196,0.68487187290202,1.11681022593471,0,0,0.666219523631325,0.404950534779652,0,0.315462165358238,0.274228867211478,0,0.0850432901510698,2.18440092641948,1.56719873483361,0,0,0,0,0,0.190023419456374,1.00812051903972,0.443461021310609,1.90509202037889,1.23012957516914,15.8481681015439,1.1554064790051,0.831173226792462,0.612508068787107,0,0,0,0,0,0,0.503587271902309,0.912392380975631,0.734187008646726,0.782391344348039,0,0.659058548203415,0,2.51975558925653,0,0,0,0,0.514518872071894,0,0,0,0,0,4.06613438482959,3.55717918444456,0,0.988866362566974,0.7104801149461,0,0,0.207379224616955,0.270011876663381,0,0,0,0.367472397644862,0.191690942036473,0,0,0,0,0,0,0,0,0,0,0,0,0,4.84647637332378,5.44115232768856,0,0,1.3599426674155,0,0,0,0,0,0,0.35333957451034,0,0,0,0,1.73192832808971,2.53359865475099,1.01104889002957,0,0.517875767294343,0,0,0,0.230615497256059,0,0,0,0.247194967734374,0,0.884610551949874,0,0.441683036920787,0,0,0,0,0.510914110417183,0.359445373517761,0,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0.520481771850815,0.459804208866946,0.180062129805349,0.60281927134286,0.136072998302656,0.12811372028485,0.187403449119458,0,2.58681591519411,0.945530400839096,0.351902248327898,0.657587197282725,0,0.348252166522167,0,0.398068533636986,0,0.51469581422943,1.42081749697796,0.828503090142008,0.469052119962192,0,0.23674473558521,0.196764231747404,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,1.06644125267617,0.696710015581316,0.515469845288373,0.403367049246685,0.22237804384487,0.760902504450237,0,0.164698954724011,0,0,0,0,0.216138049874694,0,1.13800740571849,0.342745537829186,1.1270773567308,0.203651327845314,0,0.0701358198903186,0.0632365371242573,0,0,0.123397163921801,0,0.83422552858047,0.982794975566015,0.674586337154561,0.608580364165509,0.241177159752417,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,0,0.757965647081939,1.14075483509418,0.848725428875941,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0,1.14754461763673,0.252470927204373,0,0,0.215423397732799,0.238968797952552,0.222798674082394,0,0.404810701674894,0,0,0,0.141940085208269,0.178065603667255,0,0,0,0,0.604647113929502,0.377210159511796,0,0,0,0,0,0,0,0,0,0.720244376125241,0.129358683782755,0,0,0,0.164549020602121,0,0.23467170806371,0,0,0.65954501176592,0.161464426695906,0,0.596861720015682,0.164140899745061,0.291480836629851,0,0.170870880797853,0.206386867963223,0.370389054739423,0,0.136694227721025,0,0.169978429993855,0,0.138199973804424,0,1.10717597753397,0.406638934253697,0.108005340821801,0,0,0.134864346384821,0,0,0.129614973291793,0,0,0.448549638131936,0.330916980914195,0,0,0.168956125490778,0,0,0.104859344425711,0,0,0.632022241256357,0.810900861160657,0.924398614483445,1.42912905275575,3.22248052201467,2.98022032171897,0.721172697119813,0.886137163047463,0.201932899896295,0.609654453239999,0.504130925684203,0.584747284438515,0.192423683280659,0.233753804363138,0,2.88581739386284,1.61484941897056,1.00730769818447,0.19318959403219,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,1.03787347584177,0,0.341467211508268,0.243106717068294,0.628839487883947,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.187283014939765,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0,0.188218760830661,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0,0.249810577937946,0,0,0,0.220591419119515,0 | |phase1_expression=0,0.348975407639361,0,0,0,0.16787927191189,0.233612640595526,0.129123323441576,1.12630977721333,1.40438715793196,0.68487187290202,1.11681022593471,0,0,0.666219523631325,0.404950534779652,0,0.315462165358238,0.274228867211478,0,0.0850432901510698,2.18440092641948,1.56719873483361,0,0,0,0,0,0.190023419456374,1.00812051903972,0.443461021310609,1.90509202037889,1.23012957516914,15.8481681015439,1.1554064790051,0.831173226792462,0.612508068787107,0,0,0,0,0,0,0.503587271902309,0.912392380975631,0.734187008646726,0.782391344348039,0,0.659058548203415,0,2.51975558925653,0,0,0,0,0.514518872071894,0,0,0,0,0,4.06613438482959,3.55717918444456,0,0.988866362566974,0.7104801149461,0,0,0.207379224616955,0.270011876663381,0,0,0,0.367472397644862,0.191690942036473,0,0,0,0,0,0,0,0,0,0,0,0,0,4.84647637332378,5.44115232768856,0,0,1.3599426674155,0,0,0,0,0,0,0.35333957451034,0,0,0,0,1.73192832808971,2.53359865475099,1.01104889002957,0,0.517875767294343,0,0,0,0.230615497256059,0,0,0,0.247194967734374,0,0.884610551949874,0,0.441683036920787,0,0,0,0,0.510914110417183,0.359445373517761,0,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0.520481771850815,0.459804208866946,0.180062129805349,0.60281927134286,0.136072998302656,0.12811372028485,0.187403449119458,0,2.58681591519411,0.945530400839096,0.351902248327898,0.657587197282725,0,0.348252166522167,0,0.398068533636986,0,0.51469581422943,1.42081749697796,0.828503090142008,0.469052119962192,0,0.23674473558521,0.196764231747404,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,1.06644125267617,0.696710015581316,0.515469845288373,0.403367049246685,0.22237804384487,0.760902504450237,0,0.164698954724011,0,0,0,0,0.216138049874694,0,1.13800740571849,0.342745537829186,1.1270773567308,0.203651327845314,0,0.0701358198903186,0.0632365371242573,0,0,0.123397163921801,0,0.83422552858047,0.982794975566015,0.674586337154561,0.608580364165509,0.241177159752417,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,0,0.757965647081939,1.14075483509418,0.848725428875941,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0,1.14754461763673,0.252470927204373,0,0,0.215423397732799,0.238968797952552,0.222798674082394,0,0.404810701674894,0,0,0,0.141940085208269,0.178065603667255,0,0,0,0,0.604647113929502,0.377210159511796,0,0,0,0,0,0,0,0,0,0.720244376125241,0.129358683782755,0,0,0,0.164549020602121,0,0.23467170806371,0,0,0.65954501176592,0.161464426695906,0,0.596861720015682,0.164140899745061,0.291480836629851,0,0.170870880797853,0.206386867963223,0.370389054739423,0,0.136694227721025,0,0.169978429993855,0,0.138199973804424,0,1.10717597753397,0.406638934253697,0.108005340821801,0,0,0.134864346384821,0,0,0.129614973291793,0,0,0.448549638131936,0.330916980914195,0,0,0.168956125490778,0,0,0.104859344425711,0,0,0.632022241256357,0.810900861160657,0.924398614483445,1.42912905275575,3.22248052201467,2.98022032171897,0.721172697119813,0.886137163047463,0.201932899896295,0.609654453239999,0.504130925684203,0.584747284438515,0.192423683280659,0.233753804363138,0,2.88581739386284,1.61484941897056,1.00730769818447,0.19318959403219,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,1.03787347584177,0,0.341467211508268,0.243106717068294,0.628839487883947,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.187283014939765,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0,0.188218760830661,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0,0.249810577937946,0,0,0,0.220591419119515,0 | ||
|short_description=p13@Hmga1-rs1,p14@Hmga1 | |short_description=p13@Hmga1-rs1,p14@Hmga1 | ||
}} | }} |
Latest revision as of 03:26, 27 September 2015
Short description: | p13@Hmga1-rs1, p14@Hmga1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_Hmga1-rs1_5end, CAGE_peak_14_at_Hmga1_5end |
Coexpression cluster: | MCL_coexpression_mm9:64 |
Association with transcript: | 0bp_to_ENSMUST00000046355, ENSMUST00000105046_5end |
EntrezGene: | 111241,15361 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 1.16e-09 | 54 |
erythroid lineage cell | 3.68e-09 | 3 |
erythroblast | 3.68e-09 | 3 |
erythroid progenitor cell | 3.68e-09 | 3 |
proerythroblast | 3.68e-09 | 3 |
duct epithelial cell | 1.34e-08 | 3 |
epithelial cell of tracheobronchial tree | 1.34e-08 | 3 |
branched duct epithelial cell | 1.34e-08 | 3 |
epithelial cell of lower respiratory tract | 1.34e-08 | 3 |
respiratory epithelial cell | 1.34e-08 | 3 |
tracheal epithelial cell | 1.34e-08 | 3 |
tracheoblast | 1.34e-08 | 3 |
extraembryonic cell | 1.42e-08 | 3 |
trophoblast cell | 1.42e-08 | 3 |
connective tissue cell | 2.64e-07 | 46 |
mesenchymal cell | 2.64e-07 | 46 |
insulating cell | 3.73e-07 | 2 |
myelin accumulating cell | 3.73e-07 | 2 |
Schwann cell | 3.73e-07 | 2 |
non-myelinating Schwann cell | 3.73e-07 | 2 |
myelinating Schwann cell;;Schwann cell | 3.73e-07 | 2 |
terminal Schwann cell | 3.73e-07 | 2 |
immature Schwann cell | 3.73e-07 | 2 |
Schwann cell precursor | 3.73e-07 | 2 |
leptomeningeal cell | 4.85e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
trachea | 1.34e-08 | 3 |
respiratory airway | 1.34e-08 | 3 |
tracheobronchial tree | 1.34e-08 | 3 |
lower respiratory tract | 1.34e-08 | 3 |
blastocyst | 1.42e-08 | 3 |
blastula | 1.42e-08 | 3 |
cleaving embryo | 1.42e-08 | 3 |
connective tissue | 2.64e-07 | 46 |
blood-cerebrospinal fluid barrier | 4.85e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.68e-09 | 3 |
immune system cancer | 3.68e-09 | 3 |
leukemia | 3.68e-09 | 3 |