FFCP PHASE1:Mm9::chr13:21903606..21903623,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100041230,319155,319156,319157,319158,319159,319160,319161,320332,326619,326620,69386,97122 | |EntrezGene=100041230,319155,319156,319157,319158,319159,319160,319161,320332,326619,326620,69386,97122 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=649 | |MCL_coexpression_id=649 | ||
|TSSclassifier=NA | |||
|UniProt=P62806,B2RTM0 | |UniProt=P62806,B2RTM0 | ||
|association_with_transcript=0bp_to_ENSMUST00000104941,NM_001195421,uc007prr.2_5end | |association_with_transcript=0bp_to_ENSMUST00000104941,NM_001195421,uc007prr.2_5end | ||
|cluster_id=chr13:21903606..21903623,+ | |||
|description=CAGE_peak_6_at_Hist1h4c_5end,CAGE_peak_6_at_Hist1h4d_5end,CAGE_peak_6_at_Hist1h4f_5end,CAGE_peak_6_at_Hist1h4h_5end,CAGE_peak_6_at_Hist1h4i_5end,CAGE_peak_6_at_Hist1h4j_5end,CAGE_peak_6_at_Hist1h4k_5end,CAGE_peak_6_at_Hist1h4m_5end,CAGE_peak_6_at_Hist1h4n_5end,CAGE_peak_7_at_Hist1h4a_5end,CAGE_peak_7_at_Hist1h4b_5end,CAGE_peak_7_at_Hist2h4_5end,CAGE_peak_7_at_Hist4h4_5end | |description=CAGE_peak_6_at_Hist1h4c_5end,CAGE_peak_6_at_Hist1h4d_5end,CAGE_peak_6_at_Hist1h4f_5end,CAGE_peak_6_at_Hist1h4h_5end,CAGE_peak_6_at_Hist1h4i_5end,CAGE_peak_6_at_Hist1h4j_5end,CAGE_peak_6_at_Hist1h4k_5end,CAGE_peak_6_at_Hist1h4m_5end,CAGE_peak_6_at_Hist1h4n_5end,CAGE_peak_7_at_Hist1h4a_5end,CAGE_peak_7_at_Hist1h4b_5end,CAGE_peak_7_at_Hist2h4_5end,CAGE_peak_7_at_Hist4h4_5end | ||
|id=chr13:21903606..21903623,+ | |id=chr13:21903606..21903623,+ |
Latest revision as of 06:44, 27 September 2015
Short description: | p6@Hist1h4c, p6@Hist1h4d, p6@Hist1h4f, p6@Hist1h4h, p6@Hist1h4i, p6@Hist1h4j, p6@Hist1h4k, p6@Hist1h4m, p6@Hist1h4n, p7@Hist1h4a, p7@Hist1h4b, p7@Hist2h4, p7@Hist4h4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Hist1h4c_5end, CAGE_peak_6_at_Hist1h4d_5end, CAGE_peak_6_at_Hist1h4f_5end, CAGE_peak_6_at_Hist1h4h_5end, CAGE_peak_6_at_Hist1h4i_5end, CAGE_peak_6_at_Hist1h4j_5end, CAGE_peak_6_at_Hist1h4k_5end, CAGE_peak_6_at_Hist1h4m_5end, CAGE_peak_6_at_Hist1h4n_5end, CAGE_peak_7_at_Hist1h4a_5end, CAGE_peak_7_at_Hist1h4b_5end, CAGE_peak_7_at_Hist2h4_5end, CAGE_peak_7_at_Hist4h4_5end |
Coexpression cluster: | MCL_coexpression_mm9:649 |
Association with transcript: | 0bp_to_ENSMUST00000104941, NM_001195421, uc007prr.2_5end |
EntrezGene: | 100041230,319155,319156,319157,319158,319159,319160,319161,320332,326619,326620,69386,97122 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.24e-18 | 32 |
hematopoietic oligopotent progenitor cell | 2.24e-18 | 32 |
hematopoietic stem cell | 2.24e-18 | 32 |
hematopoietic multipotent progenitor cell | 2.24e-18 | 32 |
hematopoietic lineage restricted progenitor cell | 9.35e-15 | 25 |
connective tissue cell | 6.94e-14 | 46 |
mesenchymal cell | 6.94e-14 | 46 |
motile cell | 9.40e-13 | 54 |
common myeloid progenitor | 1.39e-11 | 19 |
endo-epithelial cell | 9.22e-11 | 15 |
epithelial cell | 3.12e-10 | 25 |
myeloid cell | 4.40e-09 | 16 |
lymphoid lineage restricted progenitor cell | 7.28e-09 | 12 |
leukocyte | 3.11e-08 | 17 |
nongranular leukocyte | 3.11e-08 | 17 |
T cell | 3.95e-08 | 11 |
pro-T cell | 3.95e-08 | 11 |
endodermal cell | 6.08e-08 | 20 |
lymphocyte | 7.11e-08 | 13 |
common lymphoid progenitor | 7.11e-08 | 13 |
stem cell | 1.24e-07 | 97 |
myeloid lineage restricted progenitor cell | 2.90e-07 | 13 |
megakaryocyte-erythroid progenitor cell | 4.66e-07 | 9 |
intestinal epithelial cell | 7.29e-07 | 9 |
epithelial cell of alimentary canal | 7.29e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 6.94e-14 | 46 |
mucosa | 2.38e-09 | 15 |
intestinal mucosa | 8.38e-08 | 13 |
wall of intestine | 8.38e-08 | 13 |
gastrointestinal system mucosa | 8.38e-08 | 13 |
hemolymphoid system | 1.16e-07 | 48 |
immune system | 1.16e-07 | 48 |
organ component layer | 1.29e-07 | 24 |
simple columnar epithelium | 1.67e-07 | 11 |
hematopoietic system | 6.51e-07 | 45 |
blood island | 6.51e-07 | 45 |
epithelium of mucosa | 7.29e-07 | 9 |
gastrointestinal system epithelium | 7.29e-07 | 9 |
intestinal epithelium | 7.29e-07 | 9 |