FFCP PHASE1:Mm9::chr8:107694661..107694713,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12400 | |EntrezGene=12400 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=7 | |||
|TSSclassifier=NA | |||
|UniProt=Q08024 | |UniProt=Q08024 | ||
|association_with_transcript=87bp_to_ENSMUST00000052209,ENSMUST00000109392,ENSMUST00000109394,ENSMUST00000109395,NM_001161456,NM_001161457,NM_001161458,NM_022309,uc009nbp.2,uc009nbq.2,uc009nbr.2,uc012gjd.1_5end | |association_with_transcript=87bp_to_ENSMUST00000052209,ENSMUST00000109392,ENSMUST00000109394,ENSMUST00000109395,NM_001161456,NM_001161457,NM_001161458,NM_022309,uc009nbp.2,uc009nbq.2,uc009nbr.2,uc012gjd.1_5end | ||
|cluster_id=chr8:107694661..107694713,+ | |||
|description=CAGE_peak_2_at_Cbfb_5end | |description=CAGE_peak_2_at_Cbfb_5end | ||
|id=chr8:107694661..107694713,+ | |id=chr8:107694661..107694713,+ | ||
|ontology_enrichment_celltype=CL:0000542!5.12e-09!13;CL:0000051!5.12e-09!13;CL:0000838!7.90e-09!12;CL:0000084!2.98e-08!11;CL:0000827!2.98e-08!11;CL:0000791!4.31e-07!9;CL:0000789!4.31e-07!9;CL:0002420!4.31e-07!9;CL:0002419!4.31e-07!9;CL:0000790!4.31e-07!9 | |ontology_enrichment_celltype=CL:0000542!5.12e-09!13;CL:0000051!5.12e-09!13;CL:0000838!7.90e-09!12;CL:0000084!2.98e-08!11;CL:0000827!2.98e-08!11;CL:0000791!4.31e-07!9;CL:0000789!4.31e-07!9;CL:0002420!4.31e-07!9;CL:0002419!4.31e-07!9;CL:0000790!4.31e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000542,5.11e-09,13;CL:0000051,5.11e-09,13;CL:0000838,7.88e-09,12;CL:0000084,2.97e-08,11;CL:0000827,2.97e-08,11;CL:0000791,4.31e-07,9;CL:0000789,4.31e-07,9;CL:0002420,4.31e-07,9;CL:0002419,4.31e-07,9;CL:0000790,4.31e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006562!7.53e-09!24;UBERON:0001557!7.53e-09!24;UBERON:0001042!7.53e-09!24;UBERON:0008814!7.53e-09!24;UBERON:0009145!7.53e-09!24;UBERON:0000072!2.26e-08!27;UBERON:0002370!2.39e-08!23;UBERON:0000974!2.39e-08!23;UBERON:0004807!2.39e-08!23;UBERON:0005058!2.39e-08!23;UBERON:0003351!2.39e-08!23;UBERON:0009113!2.39e-08!23;UBERON:0003295!2.39e-08!23;UBERON:0009722!2.39e-08!23;UBERON:0005562!2.39e-08!23;UBERON:0007690!2.39e-08!23;UBERON:0003408!6.51e-08!24;UBERON:0000065!2.22e-07!41;UBERON:0001004!3.92e-07!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,8.73e-10,120;UBERON:0004120,8.73e-10,120;UBERON:0006603,8.73e-10,120;UBERON:0006562,7.51e-09,24;UBERON:0001557,7.51e-09,24;UBERON:0001042,7.51e-09,24;UBERON:0008814,7.51e-09,24;UBERON:0009145,7.51e-09,24;UBERON:0000072,2.26e-08,27;UBERON:0002370,2.39e-08,23;UBERON:0000974,2.39e-08,23;UBERON:0004807,2.39e-08,23;UBERON:0005058,2.39e-08,23;UBERON:0003351,2.39e-08,23;UBERON:0009113,2.39e-08,23;UBERON:0003295,2.39e-08,23;UBERON:0009722,2.39e-08,23;UBERON:0005562,2.39e-08,23;UBERON:0007690,2.39e-08,23;UBERON:0000153,2.94e-08,43;UBERON:0003408,6.50e-08,24;UBERON:0000065,2.21e-07,41;UBERON:0001004,3.91e-07,42 | |||
|phase1_expression=7.8472935081349,2.09385244583617,0.909998478779072,0.60492842261366,2.00358291978539,8.56184286750638,9.34450562382103,13.8161956082487,102.071823559958,83.7951004232737,60.2687248153778,49.1396499411272,14.2096605842901,11.5394931193077,1.99865857089398,2.02475267389826,0.699561878128147,11.3566379528966,12.066070157305,13.580468857537,2.72138528483423,18.2695350209629,15.1495877700583,2.87986361028132,5.96464130774642,4.01962374880514,7.75371593086335,6.03319451520489,3.23039813075836,3.2763916868791,5.54326276638262,3.17515336729816,3.69038872550742,0,5.48818077527422,4.48833542467929,6.53341940039581,4.18531630736908,9.37602413428561,7.32933241563318,4.1176204162171,4.78131839470912,3.39857247121808,6.04304726282771,5.47435428585379,6.60768307782054,1.56478268869608,3.05235218932625,3.95435128922049,3.11087838518853,6.99932108126813,1.43752564364972,15.7715649694272,31.1905721064878,21.8460969442602,7.20326420900652,4.87106847895886,5.15672092277442,2.02316460859598,0,1.90149421051854,7.79342423759004,6.22506357277798,4.94944844504769,3.9554654502679,7.8152812644071,3.89480143673926,3.84218305321555,2.7996195323289,0.945041568321835,2.10324961351382,1.42825492201902,3.97563373712904,2.44981598429908,1.0543001812006,4.5960939330501,1.10115880999389,0.766124028511126,1.22885226604995,1.18697658957174,1.37231465403614,1.04182674111352,0.837548997004143,0.56276261003168,0.763991238884051,3.24091444021034,4.6982654663704,4.28718725398191,26.5041676666144,19.1951762671235,5.79728977403356,2.58127163094416,2.719885334831,3.77792234146472,1.29955283489534,2.68816132258401,3.93244376368905,7.15807354827843,7.27400812888033,8.83348936275851,9.29566570526091,7.69958864485907,7.64415719119937,21.3320010945999,4.11332977921307,6.84071636782766,6.0662933401774,3.31133251185274,10.0985774622397,9.50029690014878,7.98032503124225,5.78484408793068,4.38169444786511,6.63179618431539,3.99801604261396,5.90632979249475,6.17987419335935,3.18118585223806,5.30766331169925,10.1913115466868,9.05450225687614,17.9403843660032,7.45567044872489,0.585561594023094,0.628340120440365,2.29911349687732,29.8339660019741,20.9965955847693,22.2372897377863,0.449371918214468,0.457500602818626,1.63350657746724,2.08589184230732,0.767146371990992,1.0389402227978,0.486723789203273,6.41587992256993,9.20611582514688,9.60346482047964,5.6819301089348,6.11566081924707,3.90833577536904,4.86167750474443,3.76762044589288,4.08218994907967,3.84341160854549,3.84177070694888,4.39795730256327,6.25147179505242,8.50977360755187,8.09375171154165,10.302199424096,12.5121262151519,10.0993128291428,10.7006710932131,10.5488161413801,17.5553296828309,14.411482798424,10.7982129770325,4.55676699578104,5.15957331958412,3.78130329068131,4.7348947117042,5.90292695242211,4.62801338662135,2.32533944750408,4.82892122519315,4.32031766758527,3.45575684818309,5.41752631461014,4.29664690593035,2.63159977365598,4.39100230582101,2.95254121272818,1.89260953707715,4.11618449517138,1.65209391491899,3.17340679996253,8.53153002140936,7.43157349953403,5.41243337552792,2.62188582010345,2.2237804384487,2.47293313946327,2.37264530772256,2.30578536613615,2.76468729680296,3.18330355265841,2.33956904542944,2.69645822596266,4.10662294761919,2.78797782556114,10.6214024533726,7.76889885746156,7.88954149711563,7.33144780243131,6.20647958936402,6.31222379012867,4.17361145020098,1.91893192373483,1.09899109488962,0.863780147452604,1.48226313543574,2.8363667971736,2.55526693647164,2.02375901146368,2.63718157805054,3.37648023653384,2.5462585178142,3.74004978686054,1.45921704097532,2.47105271869273,5.75072826109418,3.34926852901653,3.12037673114561,2.77836765741823,2.15276896226295,4.82443521363367,5.54259570499814,9.47457058852424,6.68156403412306,4.2436271443797,7.04070744865506,4.85768146581266,3.80869825417622,4.68320754858717,6.77831119656621,5.75808193086815,5.89982644032702,5.57135270033509,6.38934432903814,5.93061140184197,4.52373851817817,5.98296252200581,2.45882136509518,3.86311444826625,1.76605648986571,1.17211686592203,15.0820149746541,4.79694761688309,7.88770548540642,8.58965237452605,10.3403230911743,7.40803273652911,13.8135177931084,18.6830510320629,10.5250782435473,11.3979784585412,9.88219444866309,1.92792789853084,9.08416545332919,8.369083372361,8.1443479676788,5.93892442701128,1.32745138339963,6.06951590387454,6.65111825322452,6.22396763194464,3.2483208216885,4.61152721915891,4.65170927702798,5.81653967164009,6.77345018930971,4.10847785316561,1.05418608574999,1.03135543248187,3.06395645178409,5.94201610303324,5.56242340265844,6.21577401591618,7.44828981297549,6.95638388648075,4.44282355625727,1.522324745573,7.27482294997502,2.1183207086382,5.95426674748397,13.5206727412014,10.9795810153216,12.9069659346254,11.1016279922917,13.7878355785851,4.08073171281791,0.556275906031529,3.93003025835061,7.42992724667601,3.70389054739423,3.01389531207506,5.05768642567793,6.17701067657611,29.7462252489247,33.4483971053543,32.0623939226263,6.68269432610579,9.80641580101519,6.91286188231286,5.50827238191186,6.27264888043406,4.58561383866973,6.33862428008657,6.28166263512553,6.02038666563268,1.8146096260851,4.34937519160848,1.69107881605257,10.4661582230785,10.4238848987971,10.3059129822345,10.074466231263,10.9821481569006,9.74065080759758,13.020438484395,9.22762230946256,2.17425708743405,1.44015003128933,11.6924114632426,7.50083296573608,9.44940805916411,8.18501184760109,8.05620130503666,5.56307793387542,9.73583141111748,9.15675068482379,8.4811817956444,5.86792411243499,6.15039729334727,10.7203668813728,9.81360784731361,6.07759891344159,13.1503622496823,1.99787358036658,2.69141569828427,3.02192309455341,2.89784391048286,6.56888664079137,4.76194223094889,10.0753138167161,3.51100472824754,0.564751842617067,2.30162618253588,2.86447756719698,1.89038500578056,2.05524755931193,4.5323633843382,2.02506750069542,1.35096360967266,2.71885445390523,1.55328093525546,6.33102820263478,3.19219898720825,7.68301225893604,8.0225216632537,7.75568701723535,6.61836630420051,8.00088220085815,5.56294654545014,6.09746498224449,5.30664144703975,7.09742039692671,4.90428487603798,4.96299989590377,5.05798703998467,4.93945033018274,5.23923060411381,6.02598494913249,4.24400285020151,5.76920261124629,6.62395140604788,6.85738504770831,4.96932257246145,5.24559617884106,4.79643174886684,7.15231291156513,5.07687647350059,5.3049112133104,4.20911538300549,5.29636043998861,2.80571135828869,5.10130577933949,5.61475549540712,4.09231043169689,4.64810523557898,6.17301155139652,8.99318080576605,5.84829021113521,5.15690529715916,7.26895661861605,9.48543102213917,7.18790290423307 | |phase1_expression=7.8472935081349,2.09385244583617,0.909998478779072,0.60492842261366,2.00358291978539,8.56184286750638,9.34450562382103,13.8161956082487,102.071823559958,83.7951004232737,60.2687248153778,49.1396499411272,14.2096605842901,11.5394931193077,1.99865857089398,2.02475267389826,0.699561878128147,11.3566379528966,12.066070157305,13.580468857537,2.72138528483423,18.2695350209629,15.1495877700583,2.87986361028132,5.96464130774642,4.01962374880514,7.75371593086335,6.03319451520489,3.23039813075836,3.2763916868791,5.54326276638262,3.17515336729816,3.69038872550742,0,5.48818077527422,4.48833542467929,6.53341940039581,4.18531630736908,9.37602413428561,7.32933241563318,4.1176204162171,4.78131839470912,3.39857247121808,6.04304726282771,5.47435428585379,6.60768307782054,1.56478268869608,3.05235218932625,3.95435128922049,3.11087838518853,6.99932108126813,1.43752564364972,15.7715649694272,31.1905721064878,21.8460969442602,7.20326420900652,4.87106847895886,5.15672092277442,2.02316460859598,0,1.90149421051854,7.79342423759004,6.22506357277798,4.94944844504769,3.9554654502679,7.8152812644071,3.89480143673926,3.84218305321555,2.7996195323289,0.945041568321835,2.10324961351382,1.42825492201902,3.97563373712904,2.44981598429908,1.0543001812006,4.5960939330501,1.10115880999389,0.766124028511126,1.22885226604995,1.18697658957174,1.37231465403614,1.04182674111352,0.837548997004143,0.56276261003168,0.763991238884051,3.24091444021034,4.6982654663704,4.28718725398191,26.5041676666144,19.1951762671235,5.79728977403356,2.58127163094416,2.719885334831,3.77792234146472,1.29955283489534,2.68816132258401,3.93244376368905,7.15807354827843,7.27400812888033,8.83348936275851,9.29566570526091,7.69958864485907,7.64415719119937,21.3320010945999,4.11332977921307,6.84071636782766,6.0662933401774,3.31133251185274,10.0985774622397,9.50029690014878,7.98032503124225,5.78484408793068,4.38169444786511,6.63179618431539,3.99801604261396,5.90632979249475,6.17987419335935,3.18118585223806,5.30766331169925,10.1913115466868,9.05450225687614,17.9403843660032,7.45567044872489,0.585561594023094,0.628340120440365,2.29911349687732,29.8339660019741,20.9965955847693,22.2372897377863,0.449371918214468,0.457500602818626,1.63350657746724,2.08589184230732,0.767146371990992,1.0389402227978,0.486723789203273,6.41587992256993,9.20611582514688,9.60346482047964,5.6819301089348,6.11566081924707,3.90833577536904,4.86167750474443,3.76762044589288,4.08218994907967,3.84341160854549,3.84177070694888,4.39795730256327,6.25147179505242,8.50977360755187,8.09375171154165,10.302199424096,12.5121262151519,10.0993128291428,10.7006710932131,10.5488161413801,17.5553296828309,14.411482798424,10.7982129770325,4.55676699578104,5.15957331958412,3.78130329068131,4.7348947117042,5.90292695242211,4.62801338662135,2.32533944750408,4.82892122519315,4.32031766758527,3.45575684818309,5.41752631461014,4.29664690593035,2.63159977365598,4.39100230582101,2.95254121272818,1.89260953707715,4.11618449517138,1.65209391491899,3.17340679996253,8.53153002140936,7.43157349953403,5.41243337552792,2.62188582010345,2.2237804384487,2.47293313946327,2.37264530772256,2.30578536613615,2.76468729680296,3.18330355265841,2.33956904542944,2.69645822596266,4.10662294761919,2.78797782556114,10.6214024533726,7.76889885746156,7.88954149711563,7.33144780243131,6.20647958936402,6.31222379012867,4.17361145020098,1.91893192373483,1.09899109488962,0.863780147452604,1.48226313543574,2.8363667971736,2.55526693647164,2.02375901146368,2.63718157805054,3.37648023653384,2.5462585178142,3.74004978686054,1.45921704097532,2.47105271869273,5.75072826109418,3.34926852901653,3.12037673114561,2.77836765741823,2.15276896226295,4.82443521363367,5.54259570499814,9.47457058852424,6.68156403412306,4.2436271443797,7.04070744865506,4.85768146581266,3.80869825417622,4.68320754858717,6.77831119656621,5.75808193086815,5.89982644032702,5.57135270033509,6.38934432903814,5.93061140184197,4.52373851817817,5.98296252200581,2.45882136509518,3.86311444826625,1.76605648986571,1.17211686592203,15.0820149746541,4.79694761688309,7.88770548540642,8.58965237452605,10.3403230911743,7.40803273652911,13.8135177931084,18.6830510320629,10.5250782435473,11.3979784585412,9.88219444866309,1.92792789853084,9.08416545332919,8.369083372361,8.1443479676788,5.93892442701128,1.32745138339963,6.06951590387454,6.65111825322452,6.22396763194464,3.2483208216885,4.61152721915891,4.65170927702798,5.81653967164009,6.77345018930971,4.10847785316561,1.05418608574999,1.03135543248187,3.06395645178409,5.94201610303324,5.56242340265844,6.21577401591618,7.44828981297549,6.95638388648075,4.44282355625727,1.522324745573,7.27482294997502,2.1183207086382,5.95426674748397,13.5206727412014,10.9795810153216,12.9069659346254,11.1016279922917,13.7878355785851,4.08073171281791,0.556275906031529,3.93003025835061,7.42992724667601,3.70389054739423,3.01389531207506,5.05768642567793,6.17701067657611,29.7462252489247,33.4483971053543,32.0623939226263,6.68269432610579,9.80641580101519,6.91286188231286,5.50827238191186,6.27264888043406,4.58561383866973,6.33862428008657,6.28166263512553,6.02038666563268,1.8146096260851,4.34937519160848,1.69107881605257,10.4661582230785,10.4238848987971,10.3059129822345,10.074466231263,10.9821481569006,9.74065080759758,13.020438484395,9.22762230946256,2.17425708743405,1.44015003128933,11.6924114632426,7.50083296573608,9.44940805916411,8.18501184760109,8.05620130503666,5.56307793387542,9.73583141111748,9.15675068482379,8.4811817956444,5.86792411243499,6.15039729334727,10.7203668813728,9.81360784731361,6.07759891344159,13.1503622496823,1.99787358036658,2.69141569828427,3.02192309455341,2.89784391048286,6.56888664079137,4.76194223094889,10.0753138167161,3.51100472824754,0.564751842617067,2.30162618253588,2.86447756719698,1.89038500578056,2.05524755931193,4.5323633843382,2.02506750069542,1.35096360967266,2.71885445390523,1.55328093525546,6.33102820263478,3.19219898720825,7.68301225893604,8.0225216632537,7.75568701723535,6.61836630420051,8.00088220085815,5.56294654545014,6.09746498224449,5.30664144703975,7.09742039692671,4.90428487603798,4.96299989590377,5.05798703998467,4.93945033018274,5.23923060411381,6.02598494913249,4.24400285020151,5.76920261124629,6.62395140604788,6.85738504770831,4.96932257246145,5.24559617884106,4.79643174886684,7.15231291156513,5.07687647350059,5.3049112133104,4.20911538300549,5.29636043998861,2.80571135828869,5.10130577933949,5.61475549540712,4.09231043169689,4.64810523557898,6.17301155139652,8.99318080576605,5.84829021113521,5.15690529715916,7.26895661861605,9.48543102213917,7.18790290423307 | ||
|short_description=p2@Cbfb | |short_description=p2@Cbfb | ||
}} | }} |
Latest revision as of 07:01, 27 September 2015
Short description: | p2@Cbfb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cbfb_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | 87bp_to_ENSMUST00000052209, ENSMUST00000109392, ENSMUST00000109394, ENSMUST00000109395, NM_001161456, NM_001161457, NM_001161458, NM_022309, uc009nbp.2, uc009nbq.2, uc009nbr.2, uc012gjd.1_5end |
EntrezGene: | Cbfb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 5.11e-09 | 13 |
common lymphoid progenitor | 5.11e-09 | 13 |
lymphoid lineage restricted progenitor cell | 7.88e-09 | 12 |
T cell | 2.97e-08 | 11 |
pro-T cell | 2.97e-08 | 11 |
mature alpha-beta T cell | 4.31e-07 | 9 |
alpha-beta T cell | 4.31e-07 | 9 |
immature T cell | 4.31e-07 | 9 |
mature T cell | 4.31e-07 | 9 |
immature alpha-beta T cell | 4.31e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 8.73e-10 | 120 |
mesoderm-derived structure | 8.73e-10 | 120 |
presumptive mesoderm | 8.73e-10 | 120 |
pharynx | 7.51e-09 | 24 |
upper respiratory tract | 7.51e-09 | 24 |
chordate pharynx | 7.51e-09 | 24 |
pharyngeal arch system | 7.51e-09 | 24 |
pharyngeal region of foregut | 7.51e-09 | 24 |
segment of respiratory tract | 2.26e-08 | 27 |
thymus | 2.39e-08 | 23 |
neck | 2.39e-08 | 23 |
respiratory system epithelium | 2.39e-08 | 23 |
hemolymphoid system gland | 2.39e-08 | 23 |
pharyngeal epithelium | 2.39e-08 | 23 |
thymic region | 2.39e-08 | 23 |
pharyngeal gland | 2.39e-08 | 23 |
entire pharyngeal arch endoderm | 2.39e-08 | 23 |
thymus primordium | 2.39e-08 | 23 |
early pharyngeal endoderm | 2.39e-08 | 23 |
anterior region of body | 2.94e-08 | 43 |
gland of gut | 6.50e-08 | 24 |
respiratory tract | 2.21e-07 | 41 |
respiratory system | 3.91e-07 | 42 |