FFCP PHASE1:Mm9::chr13:33175982..33176015,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=282663 | |EntrezGene=282663 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=353 | |||
|TSSclassifier=NA | |||
|UniProt=Q8VHP7 | |UniProt=Q8VHP7 | ||
|association_with_transcript=0bp_to_ENSMUST00000016951_5end | |association_with_transcript=0bp_to_ENSMUST00000016951_5end | ||
|cluster_id=chr13:33175982..33176015,+ | |||
|description=CAGE_peak_1_at_Serpinb1b_5end | |description=CAGE_peak_1_at_Serpinb1b_5end | ||
|id=chr13:33175982..33176015,+ | |id=chr13:33175982..33176015,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002612,7.85e-08,3;CL:0000117,1.26e-07,23;CL:0000337,1.26e-07,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003076!2.06e-10!12;UBERON:0003057!2.06e-10!12;UBERON:0002240!1.37e-08!6;UBERON:0005174!1.37e-08!6;UBERON:0001137!1.37e-08!6;UBERON:0001049!6.63e-08!52;UBERON:0005068!6.63e-08!52;UBERON:0006241!6.63e-08!52;UBERON:0007135!6.63e-08!52;UBERON:0002298!1.50e-07!6;UBERON:0001948!2.26e-07!5;UBERON:0002315!2.26e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003076,4.27e-18,12;UBERON:0003057,4.27e-18,12;UBERON:0002240,4.95e-14,6;UBERON:0005174,4.95e-14,6;UBERON:0001137,4.95e-14,6;UBERON:0001948,7.05e-12,5;UBERON:0002315,7.05e-12,5;UBERON:0000073,3.54e-10,54;UBERON:0001049,1.83e-08,52;UBERON:0005068,1.83e-08,52;UBERON:0006241,1.83e-08,52;UBERON:0007135,1.83e-08,52;UBERON:0002257,7.85e-08,3;UBERON:0001017,2.78e-07,73;UBERON:0001016,5.86e-07,75 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405507724878058,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,13.7112472513826,30.4798586513227,0,0,0,1.10115880999389,2.42605942361857,3.68655679814984,0,0,0,2.51264699101243,1.68828783009504,0.61119299110724,39.1856018679978,51.2538050876771,15.8439528951505,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0.517875767294343,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,5.85561594023094,4.1889341362691,0,0,0,0,4.04434726393021,2.28750301409313,0,0.173824320192276,0.255715457330331,4.57133698031032,3.0825839982874,0,0,0,0,0,0,0,0,0.0680364991513279,0,0.374806898238915,0.776110112217047,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0.397912944082302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,43.6697604766794,42.0789954866009,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,80.6600063745717,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,1.34564891439581,0.330916980914195,0.388902376688095,0.258319646955462,0.675824501963113,0,0.13020438484395,0.209718688851422,0,0,0.316011120628178,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0.572895513439397,0.171853182343688,1.37016503954128,0,0,0,0.453142408984205,0,0,0,0,0.729320151204882,1.25767897576789,1.65459157605013,1.33348036680969,1.85431551515005,0.64183841918363,1.01078884705519,0.760437899670719,1.32038438970253,0.936415074698824,1.02440243847791,0.976402972245426,0,1.15884325944855,0.77163688185482,0.824171801606613,0.883193520806384,1.02860775715625,1.77475806159337,1.43061713968393,1.0174249164263,1.31753132581463,1.94613598150856,0.548783918618318,0.789209134313529,1.62964936615034,0,1.06771516311757,1.18205378850676,0.409231043169689,1.39443157067369,1.15743966588685,0.249810577937946,1.16965804222704,1.28922632428979,1.3390183244819,2.42650561031467,3.47801753430632 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405507724878058,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,13.7112472513826,30.4798586513227,0,0,0,1.10115880999389,2.42605942361857,3.68655679814984,0,0,0,2.51264699101243,1.68828783009504,0.61119299110724,39.1856018679978,51.2538050876771,15.8439528951505,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0.517875767294343,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,5.85561594023094,4.1889341362691,0,0,0,0,4.04434726393021,2.28750301409313,0,0.173824320192276,0.255715457330331,4.57133698031032,3.0825839982874,0,0,0,0,0,0,0,0,0.0680364991513279,0,0.374806898238915,0.776110112217047,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0.397912944082302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,43.6697604766794,42.0789954866009,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,80.6600063745717,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,1.34564891439581,0.330916980914195,0.388902376688095,0.258319646955462,0.675824501963113,0,0.13020438484395,0.209718688851422,0,0,0.316011120628178,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0.572895513439397,0.171853182343688,1.37016503954128,0,0,0,0.453142408984205,0,0,0,0,0.729320151204882,1.25767897576789,1.65459157605013,1.33348036680969,1.85431551515005,0.64183841918363,1.01078884705519,0.760437899670719,1.32038438970253,0.936415074698824,1.02440243847791,0.976402972245426,0,1.15884325944855,0.77163688185482,0.824171801606613,0.883193520806384,1.02860775715625,1.77475806159337,1.43061713968393,1.0174249164263,1.31753132581463,1.94613598150856,0.548783918618318,0.789209134313529,1.62964936615034,0,1.06771516311757,1.18205378850676,0.409231043169689,1.39443157067369,1.15743966588685,0.249810577937946,1.16965804222704,1.28922632428979,1.3390183244819,2.42650561031467,3.47801753430632 | ||
|short_description=p1@Serpinb1b | |short_description=p1@Serpinb1b | ||
}} | }} |
Latest revision as of 12:52, 1 October 2015
Short description: | p1@Serpinb1b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Serpinb1b_5end |
Coexpression cluster: | MCL_coexpression_mm9:353 |
Association with transcript: | 0bp_to_ENSMUST00000016951_5end |
EntrezGene: | Serpinb1b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 7.85e-08 | 3 |
CNS neuron (sensu Vertebrata) | 1.26e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.26e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
posterior neural tube | 4.27e-18 | 12 |
chordal neural plate | 4.27e-18 | 12 |
spinal cord | 4.95e-14 | 6 |
dorsal region element | 4.95e-14 | 6 |
dorsum | 4.95e-14 | 6 |
regional part of spinal cord | 7.05e-12 | 5 |
gray matter of spinal cord | 7.05e-12 | 5 |
regional part of nervous system | 3.54e-10 | 54 |
neural tube | 1.83e-08 | 52 |
neural rod | 1.83e-08 | 52 |
future spinal cord | 1.83e-08 | 52 |
neural keel | 1.83e-08 | 52 |
ventral horn of spinal cord | 7.85e-08 | 3 |
central nervous system | 2.78e-07 | 73 |
nervous system | 5.86e-07 | 75 |