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FFCP PHASE1:Mm9::chr1:82583356..82583417,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=12829
|EntrezGene=12829
|HGNC=
|HGNC=
|MCL_coexpression_id=305
|MCL_coexpression_id=305
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000135271_5end
|association_with_transcript=0bp_to_ENSMUST00000135271_5end
|cluster_id=chr1:82583356..82583417,-
|description=CAGE_peak_1_at_Col4a4_5end
|description=CAGE_peak_1_at_Col4a4_5end
|id=chr1:82583356..82583417,-
|id=chr1:82583356..82583417,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000464!2.13e-13!57;UBERON:0009569!4.11e-12!66;UBERON:0005178!1.04e-10!17;UBERON:0005181!1.04e-10!17;UBERON:0002224!1.04e-10!17;UBERON:0000915!1.04e-10!17;UBERON:0008947!1.04e-10!17;UBERON:0003258!1.04e-10!17;UBERON:0000466!1.44e-10!79;UBERON:0005156!1.20e-09!26;UBERON:0000990!1.20e-09!26;UBERON:0002048!1.53e-09!14;UBERON:0000117!1.53e-09!14;UBERON:0000171!1.53e-09!14;UBERON:0000170!1.53e-09!14;UBERON:0005597!1.53e-09!14;UBERON:0000118!1.53e-09!14;UBERON:0003133!3.36e-09!24;UBERON:0005177!3.57e-09!85;UBERON:0000991!5.05e-09!18;UBERON:0005564!5.05e-09!18;UBERON:0004176!8.92e-09!17;UBERON:0009196!8.92e-09!17;UBERON:0009117!8.92e-09!17;UBERON:0002100!1.27e-08!98;UBERON:0003135!1.44e-08!15;UBERON:0003101!1.52e-08!16;UBERON:0000079!1.52e-08!16;UBERON:0000473!4.05e-08!14;UBERON:0005153!4.98e-08!17;UBERON:0001008!8.05e-08!17;UBERON:0006554!1.58e-07!16;UBERON:0005157!1.61e-07!27;UBERON:0002113!1.89e-07!14;UBERON:0003918!1.89e-07!14;UBERON:0005095!1.89e-07!14;UBERON:0007687!1.89e-07!14;UBERON:0003103!4.43e-07!43
|ontology_enrichment_uberon=UBERON:0000464!2.13e-13!57;UBERON:0009569!4.11e-12!66;UBERON:0005178!1.04e-10!17;UBERON:0005181!1.04e-10!17;UBERON:0002224!1.04e-10!17;UBERON:0000915!1.04e-10!17;UBERON:0008947!1.04e-10!17;UBERON:0003258!1.04e-10!17;UBERON:0000466!1.44e-10!79;UBERON:0005156!1.20e-09!26;UBERON:0000990!1.20e-09!26;UBERON:0002048!1.53e-09!14;UBERON:0000117!1.53e-09!14;UBERON:0000171!1.53e-09!14;UBERON:0000170!1.53e-09!14;UBERON:0005597!1.53e-09!14;UBERON:0000118!1.53e-09!14;UBERON:0003133!3.36e-09!24;UBERON:0005177!3.57e-09!85;UBERON:0000991!5.05e-09!18;UBERON:0005564!5.05e-09!18;UBERON:0004176!8.92e-09!17;UBERON:0009196!8.92e-09!17;UBERON:0009117!8.92e-09!17;UBERON:0002100!1.27e-08!98;UBERON:0003135!1.44e-08!15;UBERON:0003101!1.52e-08!16;UBERON:0000079!1.52e-08!16;UBERON:0000473!4.05e-08!14;UBERON:0005153!4.98e-08!17;UBERON:0001008!8.05e-08!17;UBERON:0006554!1.58e-07!16;UBERON:0005157!1.61e-07!27;UBERON:0002113!1.89e-07!14;UBERON:0003918!1.89e-07!14;UBERON:0005095!1.89e-07!14;UBERON:0007687!1.89e-07!14;UBERON:0003103!4.43e-07!43
|ontology_enrichment_uberon_v019_2=UBERON:0009569,1.91e-13,66;UBERON:0005178,1.40e-12,17;UBERON:0005181,1.40e-12,17;UBERON:0002224,1.40e-12,17;UBERON:0000915,1.40e-12,17;UBERON:0008947,1.40e-12,17;UBERON:0003258,1.40e-12,17;UBERON:0005177,5.83e-12,79;UBERON:0005156,3.33e-11,26;UBERON:0000990,3.33e-11,26;UBERON:0002048,3.56e-11,14;UBERON:0000117,3.56e-11,14;UBERON:0000171,3.56e-11,14;UBERON:0000170,3.56e-11,14;UBERON:0005597,3.56e-11,14;UBERON:0000118,3.56e-11,14;UBERON:0002100,6.00e-11,90;UBERON:0003133,1.15e-10,24;UBERON:0000991,1.50e-10,18;UBERON:0005564,1.50e-10,18;UBERON:0004176,2.97e-10,17;UBERON:0009196,2.97e-10,17;UBERON:0009117,2.97e-10,17;UBERON:0003135,5.29e-10,15;UBERON:0003101,5.64e-10,16;UBERON:0000079,5.64e-10,16;UBERON:0000473,1.83e-09,14;UBERON:0005153,5.07e-09,17;UBERON:0002113,1.17e-08,14;UBERON:0003918,1.17e-08,14;UBERON:0011143,1.17e-08,14;UBERON:0005095,1.17e-08,14;UBERON:0007687,1.17e-08,14;UBERON:0001008,1.68e-07,19;UBERON:0006554,3.81e-07,18;UBERON:0005157,9.06e-07,20
|phase1_expression=0.320297694209588,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.0408009051405,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0.377690453926732,0.101376931219515,0.183546752161682,0,11.1192829754028,4.83309602015838,15.748821825017,0.839918529752175,0,0,0,0,1.28629718017973,2.0057340795713,3.6097046459421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.307213066512487,0,0,0,0,0,0,0,0.284743361598206,0.186399445825301,0.075726193333184,0,4.05810284182349,0,0,0,0,0,7.5839986871146,0,0,0,0.845060518660083,0,0,0,4.97929394325792,5.32055717497707,7.07734223020697,19.5254434319593,0,7.57054909230606,0.173485326766136,6.08930956624282,2.7673859670727,4.37095657602605,10.2302175208063,7.91699525376955,5.19109432242185,3.03658649531814,0,0,0.441683036920787,0,1.86391761218122,0.585561594023094,0.628340120440365,0.255457055208591,0,0,0,0.149790639404823,0,0,0.347648640384553,0,0.41557608911912,0.162241263067758,14.6648683944455,13.0627319140598,7.32895999457657,4.8401626853889,2.08192708740326,2.06911893990126,3.96136685571768,4.52114453507145,10.0694018743965,8.83984669965463,6.93392761741993,20.4375662883822,0,0,0,0,0,0.348252166522167,0.205782136407943,3.38358253591438,0,0,0,0,0,0.36012412292203,0.473489471170421,0.787056926989615,0.617068451549513,0.465067889500816,2.68273401399619,1.86824547787471,3.78487654801005,5.25335885053105,9.97146357414026,14.4737987551079,10.3188554186794,9.66286215074677,0.841159794256509,1.44066457330998,0,0,0.213288250535234,0.696710015581316,0.257734922644187,0.201683524623343,0.22237804384487,0.570676878337677,0.949058123089023,0,1.00534083520108,1.39269530428806,0.974820435595601,0.898819408654221,0.432276099749388,1.1948476395262,1.32767530667157,1.82797620175566,4.50830942692322,8.14605311381257,12.9948166402309,26.9321548378823,97.7004498569775,145.691216055867,132.349927570279,125.124724216706,0.592905254174298,0,0,0.224862112384854,0,0.482354319504834,1.52775511068852,4.60313819921297,0.648540907100142,0.274561413188081,4.31304619582064,7.07067800570156,1.24815069245824,3.03094653536534,1.07638448113147,1.4473305640901,57.6429953319807,1.51593129416388,6.19266910479698,7.97801903143384,11.0304416695596,28.6435700225505,47.3706845363167,92.2982154367388,105.615546551148,103.424010065978,112.893976209501,105.200248047504,104.474414028867,120.348016739818,0,0,0.491764273019036,0,0.642202359951168,0.937693492737625,0,3.28212205365685,0,0,0,0,0.222798674082394,0,0,0,1.18586333383957,0.321321316421807,9.36804562374573,1.6025904330053,3.25773918707152,5.27904393512113,0,0,0,0,0.885905678642318,0.307435147943927,1.03371317267288,2.18120237686503,1.42598951353889,1.8962205476149,1.05418608574999,2.06271086496374,3.40439605753788,0.720244376125241,0,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0.608929898229199,0,0.21183207086382,1.7642271844397,3.79238381765404,0.161464426695906,1.44751019827574,3.70054266409723,5.0883678920969,1.7488850197791,0.18542530201051,0,2.68302928352189,3.33350149265481,0.376736914009382,0.136694227721025,0,0,0,0,0.954670618015114,0.474503990371703,1.42323626988794,0.648032044930808,0.836353184057875,0.436725127492355,1.21377911746339,1.73572257023205,2.6175594198403,0.259229946583586,4.34937519160848,1.69107881605257,7.7748603942869,6.12196414691261,13.8060343724274,17.0490966990605,26.3571555765614,33.6815274913314,69.1385283521375,82.2097260297573,48.0752400443752,33.9875407384281,0,0,0,0,0,0,0,0.443068581523732,0,0,0,0.0974578807397524,0.0962118416403295,0,0.680191150845634,0,0,0,2.12508553435409,5.63047426353546,5.31139710375069,3.85863082342319,1.00314420807073,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0.419226325255965,0.919217542250071,3.11145418922261,2.47242068686673,5.45562656306086,1.76888048234658,3.04175159868288,3.2066478035633,2.80924522409647,2.4969809437899,2.41228969613576,2.38146845641537,3.59241410429052,4.24400285020151,2.06042950401653,2.20798380201596,2.40008476669791,3.19456451086807,1.66905332963125,1.88950341622027,2.1645157495526,2.70766745253365,3.29270351170991,3.15683653725411,2.8518863907631,5.05028044491965,2.01679530811096,2.65962102414021,1.63692417267876,3.25367366490529,2.3148793317737,0.249810577937946,2.33931608445408,4.08255002691767,0.382576664137687,0.661774257358546,0
|phase1_expression=0.320297694209588,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.0408009051405,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0.377690453926732,0.101376931219515,0.183546752161682,0,11.1192829754028,4.83309602015838,15.748821825017,0.839918529752175,0,0,0,0,1.28629718017973,2.0057340795713,3.6097046459421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.307213066512487,0,0,0,0,0,0,0,0.284743361598206,0.186399445825301,0.075726193333184,0,4.05810284182349,0,0,0,0,0,7.5839986871146,0,0,0,0.845060518660083,0,0,0,4.97929394325792,5.32055717497707,7.07734223020697,19.5254434319593,0,7.57054909230606,0.173485326766136,6.08930956624282,2.7673859670727,4.37095657602605,10.2302175208063,7.91699525376955,5.19109432242185,3.03658649531814,0,0,0.441683036920787,0,1.86391761218122,0.585561594023094,0.628340120440365,0.255457055208591,0,0,0,0.149790639404823,0,0,0.347648640384553,0,0.41557608911912,0.162241263067758,14.6648683944455,13.0627319140598,7.32895999457657,4.8401626853889,2.08192708740326,2.06911893990126,3.96136685571768,4.52114453507145,10.0694018743965,8.83984669965463,6.93392761741993,20.4375662883822,0,0,0,0,0,0.348252166522167,0.205782136407943,3.38358253591438,0,0,0,0,0,0.36012412292203,0.473489471170421,0.787056926989615,0.617068451549513,0.465067889500816,2.68273401399619,1.86824547787471,3.78487654801005,5.25335885053105,9.97146357414026,14.4737987551079,10.3188554186794,9.66286215074677,0.841159794256509,1.44066457330998,0,0,0.213288250535234,0.696710015581316,0.257734922644187,0.201683524623343,0.22237804384487,0.570676878337677,0.949058123089023,0,1.00534083520108,1.39269530428806,0.974820435595601,0.898819408654221,0.432276099749388,1.1948476395262,1.32767530667157,1.82797620175566,4.50830942692322,8.14605311381257,12.9948166402309,26.9321548378823,97.7004498569775,145.691216055867,132.349927570279,125.124724216706,0.592905254174298,0,0,0.224862112384854,0,0.482354319504834,1.52775511068852,4.60313819921297,0.648540907100142,0.274561413188081,4.31304619582064,7.07067800570156,1.24815069245824,3.03094653536534,1.07638448113147,1.4473305640901,57.6429953319807,1.51593129416388,6.19266910479698,7.97801903143384,11.0304416695596,28.6435700225505,47.3706845363167,92.2982154367388,105.615546551148,103.424010065978,112.893976209501,105.200248047504,104.474414028867,120.348016739818,0,0,0.491764273019036,0,0.642202359951168,0.937693492737625,0,3.28212205365685,0,0,0,0,0.222798674082394,0,0,0,1.18586333383957,0.321321316421807,9.36804562374573,1.6025904330053,3.25773918707152,5.27904393512113,0,0,0,0,0.885905678642318,0.307435147943927,1.03371317267288,2.18120237686503,1.42598951353889,1.8962205476149,1.05418608574999,2.06271086496374,3.40439605753788,0.720244376125241,0,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0.608929898229199,0,0.21183207086382,1.7642271844397,3.79238381765404,0.161464426695906,1.44751019827574,3.70054266409723,5.0883678920969,1.7488850197791,0.18542530201051,0,2.68302928352189,3.33350149265481,0.376736914009382,0.136694227721025,0,0,0,0,0.954670618015114,0.474503990371703,1.42323626988794,0.648032044930808,0.836353184057875,0.436725127492355,1.21377911746339,1.73572257023205,2.6175594198403,0.259229946583586,4.34937519160848,1.69107881605257,7.7748603942869,6.12196414691261,13.8060343724274,17.0490966990605,26.3571555765614,33.6815274913314,69.1385283521375,82.2097260297573,48.0752400443752,33.9875407384281,0,0,0,0,0,0,0,0.443068581523732,0,0,0,0.0974578807397524,0.0962118416403295,0,0.680191150845634,0,0,0,2.12508553435409,5.63047426353546,5.31139710375069,3.85863082342319,1.00314420807073,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0.419226325255965,0.919217542250071,3.11145418922261,2.47242068686673,5.45562656306086,1.76888048234658,3.04175159868288,3.2066478035633,2.80924522409647,2.4969809437899,2.41228969613576,2.38146845641537,3.59241410429052,4.24400285020151,2.06042950401653,2.20798380201596,2.40008476669791,3.19456451086807,1.66905332963125,1.88950341622027,2.1645157495526,2.70766745253365,3.29270351170991,3.15683653725411,2.8518863907631,5.05028044491965,2.01679530811096,2.65962102414021,1.63692417267876,3.25367366490529,2.3148793317737,0.249810577937946,2.33931608445408,4.08255002691767,0.382576664137687,0.661774257358546,0
|short_description=p1@Col4a4
|short_description=p1@Col4a4
}}
}}

Latest revision as of 16:10, 1 October 2015

Short description:p1@Col4a4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Col4a4_5end
Coexpression cluster:MCL_coexpression_mm9:305
Association with transcript: 0bp_to_ENSMUST00000135271_5end
EntrezGene:Col4a4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Col4a4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A331.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C211.12
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.83
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C315.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.61
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.06
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.58
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.98
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G25.32
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G37.08
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B619.53
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D77.57
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D66.09
adrenal gland, embryo E17.CNhs11043.1263-45I12.77
adrenal gland, embryo E18.CNhs11026.1262-18F54.37
adrenal gland, neonate N00.CNhs11191.1311-23C110.23
adrenal gland, neonate N25.CNhs11223.1377-27I37.92
amnion, adult pregnant day17.5.CNhs10488.583-22A85.19
aorta, adult.CNhs10498.46-23H13.04
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B114.66
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A213.06
epididymis, adult.CNhs10490.58-23B27.33
eyeball, adult.CNhs10484.31-12G44.84
eyeball, embryo E12.CNhs11016.345-16C62.08
eyeball, embryo E14.CNhs10521.399-16E22.07
eyeball, embryo E15.CNhs10593.426-16C93.96
eyeball, embryo E17.CNhs11023.1261-18D44.52
eyeball, neonate N00.CNhs11207.633-15C610.07
eyeball, neonate N01.CNhs11140.1532-43E78.84
eyeball, neonate N02.CNhs11205.1551-44G86.93
eyeball, neonate N16.CNhs11188.777-19A220.44
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I63.38
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G32.68
heart, neonate N00.CNhs11213.639-21E31.87
heart, neonate N03.CNhs11221.1349-25I23.78
heart, neonate N10.CNhs11118.749-24G15.25
heart, neonate N16.CNhs11209.782-15G19.97
heart, neonate N20.CNhs11127.821-26I614.47
heart, neonate N25.CNhs11196.1351-25D310.32
heart, neonate N30.CNhs11202.1390-42D29.66
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G11.44
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I91.33
kidney, embryo E15.CNhs10997.434-16F81.83
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I28.15
kidney, embryo E18.CNhs11001.1288-20C712.99
kidney, neonate N00.CNhs11214.646-21G726.93
kidney, neonate N10.CNhs11206.758-6D597.70
kidney, neonate N20.CNhs11113.832-19I1145.69
kidney, neonate N25.CNhs11122.1353-25F3132.35
kidney, neonate N30.CNhs11203.1385-42H1125.12
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G44.60
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H27.07
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A33.03
liver, neonate N25.CNhs11198.1368-26H11.08
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B157.64
lung, embryo E12.CNhs10522.354-16G21.52
lung, embryo E14.CNhs10604.404-26F86.19
lung, embryo E15.CNhs11020.432-17C57.98
lung, embryo E16.CNhs10998.458-17B611.03
lung, embryo E17.CNhs10605.480-44A628.64
lung, embryo E18.CNhs10583.1287-20I647.37
lung, neonate N00.CNhs11224.640-42C692.30
lung, neonate N06.CNhs11212.683-20E5105.62
lung, neonate N07.CNhs11111.715-19A3103.42
lung, neonate N10.CNhs11219.750-23E6112.89
lung, neonate N20.CNhs11109.822-18A4105.20
lung, neonate N25.CNhs11119.1359-25C7104.47
lung, neonate N30.CNhs11133.1394-42H2120.35
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.28
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I79.37
ovary, embryo E18.CNhs11040.505-44H71.60
ovary, neonate N00.CNhs11217.1299-22I43.26
oviduct, adult pregnant day01.CNhs10500.988-6G65.28
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G83.40
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F81.76
skin, adult.CNhs10492.30-1C33.79
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H31.45
skin, neonate N06.CNhs11097.693-20I53.70
skin, neonate N10.CNhs11108.762-6C45.09
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C12.68
spleen, embryo E18.CNhs11011.1271-21F23.33
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A91.74
stomach, neonate N25.CNhs11104.1355-25E42.62
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F57.77
testis, embryo E15.CNhs11034.443-27C56.12
testis, embryo E16.CNhs11033.470-26G513.81
testis, embryo E17.CNhs11029.486-18I517.05
testis, embryo E18.CNhs11027.503-18G526.36
testis, neonate N00.CNhs11189.1300-22B733.68
testis, neonate N07.CNhs11222.726-26I469.14
testis, neonate N10.CNhs11204.763-44D982.21
testis, neonate N20.CNhs11110.839-18H348.08
testis, neonate N30.CNhs11130.1391-42E233.99
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.13
uterus, adult pregnant day19.CNhs10497.590-15F55.63
uterus, adult.CNhs10509.92-27E55.31
vagina, adult.CNhs10502.89-27D53.86
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.46
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.04
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.41
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.59
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.24
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.21
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.19
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.16
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.71
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.85
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.66
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.25
whole body, embryo E17.5.CNhs10513.490-9F92.31
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C24.08
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
subdivision of trunk1.91e-1366
thoracic cavity element1.40e-1217
thoracic segment organ1.40e-1217
thoracic cavity1.40e-1217
thoracic segment of trunk1.40e-1217
respiratory primordium1.40e-1217
endoderm of foregut1.40e-1217
trunk region element5.83e-1279
reproductive structure3.33e-1126
reproductive system3.33e-1126
lung3.56e-1114
respiratory tube3.56e-1114
respiration organ3.56e-1114
pair of lungs3.56e-1114
lung primordium3.56e-1114
lung bud3.56e-1114
trunk6.00e-1190
reproductive organ1.15e-1024
gonad1.50e-1018
gonad primordium1.50e-1018
external genitalia2.97e-1017
indifferent external genitalia2.97e-1017
indifferent gonad2.97e-1017
male reproductive organ5.29e-1015
male organism5.64e-1016
male reproductive system5.64e-1016
testis1.83e-0914
epithelial bud5.07e-0917
kidney1.17e-0814
kidney mesenchyme1.17e-0814
upper urinary tract1.17e-0814
kidney rudiment1.17e-0814
kidney field1.17e-0814
renal system1.68e-0719
urinary system structure3.81e-0718
epithelial fold9.06e-0720
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