FFCP PHASE1:Mm9::chr5:128112608..128112641,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr5:128112608..128112641,+ to FFCP PHASE1:Mm9::chr5:128112608..128112641,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=319804 | |EntrezGene=319804 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt=A4FUP9 | |UniProt=A4FUP9 | ||
|association_with_transcript=0bp_to_ENSMUST00000118139,ENSMUST00000137157,ENSMUST00000165393,NM_177005,uc008zsd.1_5end | |||
|cluster_id=chr5:128112608..128112641,+ | |||
|description=CAGE_peak_1_at_Glt1d1_5end | |||
|id=chr5:128112608..128112641,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!2.53e-07!63;UBERON:0003056!3.08e-07!49;UBERON:0009854!3.59e-07!23;UBERON:0009856!3.59e-07!23;UBERON:0001049!4.18e-07!52;UBERON:0005068!4.18e-07!52;UBERON:0006241!4.18e-07!52;UBERON:0007135!4.18e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,3.18e-08,73;UBERON:0002346,3.93e-08,64;UBERON:0003075,3.93e-08,64;UBERON:0007284,3.93e-08,64;UBERON:0009854,2.33e-07,23;UBERON:0009856,2.33e-07,23;UBERON:0000073,3.00e-07,54;UBERON:0002021,4.12e-07,10;UBERON:0000411,4.12e-07,10;UBERON:0001950,4.12e-07,10;UBERON:0001049,4.31e-07,52;UBERON:0005068,4.31e-07,52;UBERON:0006241,4.31e-07,52;UBERON:0007135,4.31e-07,52;UBERON:0003056,7.81e-07,49;UBERON:0002107,9.18e-07,22;UBERON:0007499,9.18e-07,22;UBERON:0006925,9.18e-07,22;UBERON:0009497,9.18e-07,22;UBERON:0000015,9.18e-07,22;UBERON:0002423,9.18e-07,22;UBERON:0006235,9.18e-07,22;UBERON:0008835,9.18e-07,22;UBERON:0003894,9.18e-07,22;UBERON:0004161,9.18e-07,22;UBERON:0008836,9.18e-07,22 | |||
|phase1_expression=0.160148847104794,0,1.36499771816861,0.60492842261366,0.500895729946347,2.01455126294268,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0.315462165358238,0.137114433605739,0,1.78590909317247,1.78723712161594,1.04479915655574,2.23989391910769,1.14704640533585,0,3.01533397311352,1.07735616342945,1.71021077510736,0.756090389279792,2.88249663851896,0,0,0,3.46621943701529,2.65975432573588,2.45003227514843,0.837063261473815,3.1253413780952,0.523523743973798,1.76469446409304,3.41522742479223,1.94204141212461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21389876515759,0,1.26766280701236,0,0,0,0,0,0,0.384218305321555,0.829516898467821,0.540023753326763,0.420649922702764,2.57085885963423,4.63823935998388,1.10241719293459,0.766763768145891,0,1.10115880999389,2.42605942361857,4.14737639791857,1.45074916503213,1.28082701043374,2.6045668527838,3.90856198601933,2.25105044012672,3.51435969886663,2.94628585473668,2.70506193518296,2.42319279572891,0.075726193333184,0.226714680320357,0.289864488701678,46.4628893569949,11.5595126730318,32.382191498269,118.909084392923,94.5336731775378,5.19644354487482,0,0,0,0.563373679106722,0,0,0,0.432982082022428,0.253359865475099,0,17.127581957859,0.517875767294343,0.445326417194474,0.520455980298408,0.304465478312141,0.691846491768175,0.301445281105245,1.41106448562846,0.125666591329675,0.741584903203122,1.01219549843938,0,0.161766849947409,0.662524555381181,0.484875253135222,16.775258509631,8.19786231632332,9.84399522023239,2.81002760729451,0.359445373517761,0,1.01656181658452,8.08869452786043,8.23501085073528,5.15182843662744,7.47444576826789,11.2514801225345,6.02585329222724,8.92326946872667,0.611036183101898,1.24406970610093,0.505445516867349,1.68353484709179,3.12289063110489,2.06911893990126,2.52086981727489,3.91832526372859,5.30684693380357,3.71529788826064,3.46696380870997,2.06962696591213,1.94011193639558,1.70195472151037,1.23165786914764,0.43839146485515,1.11218899690239,0,1.64625709126355,1.99034266818493,5.61770549850588,2.05878325691772,3.9782889915383,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0.164167464079095,0,0,0,0,7.99101804543684,1.64647379806855,0.991256348951394,0,1.06644125267617,0.696710015581316,0.128867461322093,0.201683524623343,0.444756087689741,0.570676878337677,1.89811624617805,0.329397909448022,1.25667604400135,1.79060824837036,2.53453313254856,1.79763881730844,6.26800344636613,6.57166201739412,0.948339504765408,1.82797620175566,1.1270773567308,1.22190796707189,0.387904974335251,1.1221731182451,2.40298841072178,4.42830443938806,5.49495547444812,10.1185674415876,65.5160305862599,0.166845105716094,0.196558995113203,0.449724224769707,0.202860121388503,0.482354319504834,1.52775511068852,8.0554918486227,95.8219190240459,19.2192989231657,33.0666875012915,36.8419538191818,20.9065240986756,62.8921406088308,39.6468283883426,139.426177674013,2.21703828199926,0.37898282354097,0.651859905768103,0.848725428875941,0.469380496577004,0.167506257441816,0.714130922658041,0.390267295715598,1.10344600874334,0.44292937929755,0.637819074629948,1.14704320301017,1.03610989119537,1.73578870297814,0,0,0,0,7.38532713943843,5.62616095642575,0,0,0,0.390438744296638,0.215423397732799,0.238968797952552,0.222798674082394,0,0,0,0,3.53453448063988,0,1.95872164033981,1.62886959353576,0.329940245945071,11.9470624505967,2.18502572539483,4.53485335447127,3.01768127609437,1.47650946440386,3.07435147943927,4.9101375701962,7.27067458955011,6.41695281092498,12.3254335594968,9.48767477174989,14.4389760547462,4.42571487479924,1.26042765821917,0.517434735131018,0.643011105094777,0.709360934569094,0.891844088010353,0.164549020602121,1.2178597964584,0.938686832254841,0.847328283455281,19.8475558249466,4.78170133530292,4.03661066739764,3.5584625707612,3.46179797609096,5.0883678920969,2.62332752966866,5.19190845629427,0.512612642393558,0,0.555583582109135,0.376736914009382,0.136694227721025,0,0,0.139951452323658,0.138199973804424,11.4560474161814,0.316335993581135,2.23651413839534,1.29606408986162,0.836353184057875,1.9652630737156,2.02296519577231,8.84391976261094,4.71160695571253,18.6645561540182,0,0.56369293868419,2.39226473670366,1.15820943319968,0.194451188344048,0.129159823477731,0,0.117357238645754,0.781226309063701,0.629156066554265,0,0,0,0.202725215290164,0.308132871494482,0,0.358053391334963,0.198681354781265,0.240390899039938,0,0.100966449948148,0.15241361331,0,0.194915761479505,0.192423683280659,0.233753804363138,1.36038230169127,5.99362074109975,9.15081337416652,6.04384618910682,0.772758376128762,0,0.183151624267265,1.07184189539533,3.51100472824754,8.471277639256,5.9842280745933,9.16632821503035,10.1393377582776,9.59115527678899,8.3093328712867,8.77529250301348,10.3573876741571,5.43770890781046,12.4262474820437,1.03787347584177,0.798049746802062,0.682934423016537,0.243106717068294,0.838452650511929,1.47074806760011,1.55572709461131,0.618105171716683,1.28367683836726,0.252697211763798,0.760437899670719,1.13175804831646,0.842773567228942,0.704276676453562,0.976402972245426,0.952587382566147,1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| 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| ||
|short_description=p1@Glt1d1 | |||
}} | }} |
Latest revision as of 22:28, 1 October 2015
Short description: | p1@Glt1d1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Glt1d1_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 0bp_to_ENSMUST00000118139, ENSMUST00000137157, ENSMUST00000165393, NM_177005, uc008zsd.1_5end |
EntrezGene: | Glt1d1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ecto-epithelium | 3.18e-08 | 73 |
neurectoderm | 3.93e-08 | 64 |
neural plate | 3.93e-08 | 64 |
presumptive neural plate | 3.93e-08 | 64 |
digestive tract diverticulum | 2.33e-07 | 23 |
sac | 2.33e-07 | 23 |
regional part of nervous system | 3.00e-07 | 54 |
occipital lobe | 4.12e-07 | 10 |
visual cortex | 4.12e-07 | 10 |
neocortex | 4.12e-07 | 10 |
neural tube | 4.31e-07 | 52 |
neural rod | 4.31e-07 | 52 |
future spinal cord | 4.31e-07 | 52 |
neural keel | 4.31e-07 | 52 |
pre-chordal neural plate | 7.81e-07 | 49 |
liver | 9.18e-07 | 22 |
epithelial sac | 9.18e-07 | 22 |
digestive gland | 9.18e-07 | 22 |
epithelium of foregut-midgut junction | 9.18e-07 | 22 |
anatomical boundary | 9.18e-07 | 22 |
hepatobiliary system | 9.18e-07 | 22 |
foregut-midgut junction | 9.18e-07 | 22 |
hepatic diverticulum | 9.18e-07 | 22 |
liver primordium | 9.18e-07 | 22 |
septum transversum | 9.18e-07 | 22 |
liver bud | 9.18e-07 | 22 |