FFCP PHASE1:Mm9::chr3:36049985..36050034,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=241944 | |EntrezGene=241944 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1301 | |||
|TSSclassifier=NA | |||
|UniProt=F7A4H5 | |UniProt=F7A4H5 | ||
|association_with_transcript=0bp_to_NM_001101478,uc008ozg.2_5end | |association_with_transcript=0bp_to_NM_001101478,uc008ozg.2_5end | ||
|cluster_id=chr3:36049985..36050034,+ | |||
|description=CAGE_peak_1_at_D3Ertd254e_5end | |description=CAGE_peak_1_at_D3Ertd254e_5end | ||
|id=chr3:36049985..36050034,+ | |id=chr3:36049985..36050034,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!2.58e-11!63;UBERON:0004121!3.78e-10!102;UBERON:0000924!3.78e-10!102;UBERON:0006601!3.78e-10!102;UBERON:0000153!1.78e-09!94;UBERON:0002346!9.53e-09!71;UBERON:0003075!9.53e-09!71;UBERON:0007284!9.53e-09!71;UBERON:0003056!2.48e-08!49;UBERON:0000468!4.48e-08!333;UBERON:0000955!1.71e-07!50;UBERON:0006238!1.71e-07!50;UBERON:0002021!3.39e-07!10;UBERON:0000411!3.39e-07!10;UBERON:0001950!3.39e-07!10;UBERON:0007811!3.58e-07!86;UBERON:0002616!4.35e-07!49;UBERON:0001049!4.37e-07!52;UBERON:0005068!4.37e-07!52;UBERON:0006241!4.37e-07!52;UBERON:0007135!4.37e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,7.44e-13,73;UBERON:0004121,8.92e-11,95;UBERON:0000924,8.92e-11,95;UBERON:0006601,8.92e-11,95;UBERON:0002346,1.38e-09,64;UBERON:0003075,1.38e-09,64;UBERON:0007284,1.38e-09,64;UBERON:0003056,2.48e-08,49;UBERON:0010314,1.28e-07,92;UBERON:0000073,1.96e-07,54;UBERON:0002021,3.39e-07,10;UBERON:0000411,3.39e-07,10;UBERON:0001950,3.39e-07,10;UBERON:0001049,4.37e-07,52;UBERON:0005068,4.37e-07,52;UBERON:0006241,4.37e-07,52;UBERON:0007135,4.37e-07,52 | |||
|phase1_expression=23.2215828301951,5.58360652222978,3.18499467572675,6.65421264875026,5.00895729946347,5.03637815735669,7.00837921786577,14.0744422551318,2.53419699873,5.14941957908386,3.5955773327356,6.70086135560826,8.56003649656029,11.8891747289836,3.33109761815663,4.45445588257617,3.49780939064073,6.46697438984387,6.03303507865251,3.81950686618227,11.3107575900923,3.57447424323187,4.96279599363977,7.99962113967033,7.34109699414944,1.14846392823004,4.73838195774982,6.03319451520489,5.89072600314759,7.81293402255785,4.8780712344167,11.4305521222734,4.92051830067656,0,5.19932915552294,5.65197794218874,5.51257261908397,0,2.3440060335714,1.57057123192139,0,0,0.485510353031154,21.2765622378726,20.0726323814639,15.6014739337429,4.69434806608824,3.2703773457067,2.63623419281366,5.8328969722285,1.67983705950435,0,5.70460860596304,10.8804321301702,9.41062637598899,13.6347501099052,15.1862723167541,9.7977697532714,9.71119012126069,8.46385566835253,8.87363964908651,2.71075625655306,5.33576877666684,2.2497492932035,1.97773272513395,2.1314403448383,2.39680088414724,1.15265491596466,11.3021677416241,9.45041568321835,8.62332341540666,10.5690864229407,8.1721360152097,11.2691535277758,8.14686503655009,7.35375029288017,18.7196997698961,19.2807880508633,18.1255709242367,9.89147157976454,10.7955419450843,10.4182674111352,12.0048689570594,19.1339287410771,18.6413862287708,22.9810296669461,23.0642122894547,18.2671456908795,8.40560745998343,13.6028808192214,17.3918693221007,6.88339101585109,2.719885334831,8.09554787456726,9.74664626171504,4.92829575807069,9.83110940922263,15.3387290320252,9.09251016110041,6.71345191569646,17.8871143116384,14.115912515575,7.64415719119937,7.11066703153331,5.84525810730278,8.86759529162845,7.07734223020697,8.10705546005326,17.3488382043605,16.7739617143252,9.02123699183906,14.0054120023585,10.6083128737787,10.5505848386836,17.1679512418129,9.80199412371469,4.94389935468748,30.7996630239412,0.884610551949874,11.8089800461609,7.28777010919299,12.1218813283806,13.0474232852686,30.4492028892009,19.0596503200244,7.40825460104915,8.50687383992034,4.79922184794726,7.87835407853001,35.0510096207285,26.5350349634803,25.8847965352501,30.0716073932638,25.8272611903634,28.8825381937789,24.1739481970959,19.8586759508117,10.698999472468,15.1633655060205,26.5156738416957,19.9084277732937,11.4951052216736,21.0672691872259,19.1395118651358,19.7986212530364,24.0853794135518,16.3978017979525,27.1638539275966,13.5807835547691,23.8273661011452,25.5129130037726,18.4124415239163,28.9169139194622,24.3776516565517,23.8707278233214,16.5198441459349,6.31991868581911,4.11756651383544,5.39910648851626,11.8061690345236,12.8989332989603,10.4435995647389,12.7842157216014,11.6090896730968,14.1925743856388,14.8821724640261,8.31647544338819,10.1585847859437,11.1900697941167,13.1333971263276,12.1603214318784,11.4035990191759,15.3685080703735,12.6154033634749,30.0714626446702,33.9585220851639,4.62586296177317,8.72686869989696,18.5560777965654,14.1664369834868,15.0774929746849,11.2942773789072,13.3426826306922,10.6526350623033,6.16887780007865,11.3642278759568,11.0587491872119,14.523822459004,11.8928093142663,6.29173586057955,9.07779809473716,7.36822711041159,6.44870863240478,16.4517858158009,18.0332377076929,15.2738495883986,14.1585315632367,13.4660774189412,16.3150265780584,18.8940989413891,13.9728867778824,14.3140710149289,12.7474629647474,6.67380422864376,6.4864468387357,5.17182858485164,5.07150303471257,6.99413763282009,3.56476192493988,6.04161888646702,3.72911021582581,6.04035109013779,7.18841032636773,11.1642284300551,7.80094182786401,8.08252409430758,6.63770430031075,10.1313139486307,14.041242452662,12.3169417650815,16.4594626206446,14.9375675482166,15.7242466353296,18.0906758037161,13.8065311713888,10.3420833364633,24.2758121923534,17.9386398615508,15.4671125597762,19.8274610806043,16.7504432409919,15.3328002096402,6.03165135757089,3.26343410291226,18.6870423747234,28.1455481230827,34.5183768473753,25.5521476771003,19.8361283905777,13.6334300690361,14.5133780931478,13.2749173060857,15.2950612390287,16.010909462821,17.8238939265915,14.1538265394416,18.2164815753702,11.6902343164525,21.7408277870588,24.7417413644791,25.8330955079049,10.1497394090335,19.3835481630756,26.5601897985782,18.5843193675948,10.6823479908192,6.04647113929502,12.6365403436452,8.26845300066164,12.2974059177571,12.4045580720746,11.2695456138027,19.250858432775,16.4339114126624,15.8127912862498,12.3762651897824,27.5756080660568,18.9064148732876,7.63216234318252,14.1462443120851,22.699549906211,14.2695054081656,16.6194510808142,11.8741330154694,8.21350978222986,7.41412248023371,20.2886126210565,19.1268053412117,24.8655217111695,22.1951563735614,18.9802026964987,18.5479216711919,4.66369338607761,27.999220603587,5.98048082792484,12.7959858137198,11.8524497516615,7.15800136617826,7.92826520781946,4.57556346413045,10.1987057996313,12.1757763521582,11.746997773376,10.5013767981662,18.5056556244964,14.84232110026,15.0127423742304,14.6361807210128,14.41192920724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| |phase1_expression=23.2215828301951,5.58360652222978,3.18499467572675,6.65421264875026,5.00895729946347,5.03637815735669,7.00837921786577,14.0744422551318,2.53419699873,5.14941957908386,3.5955773327356,6.70086135560826,8.56003649656029,11.8891747289836,3.33109761815663,4.45445588257617,3.49780939064073,6.46697438984387,6.03303507865251,3.81950686618227,11.3107575900923,3.57447424323187,4.96279599363977,7.99962113967033,7.34109699414944,1.14846392823004,4.73838195774982,6.03319451520489,5.89072600314759,7.81293402255785,4.8780712344167,11.4305521222734,4.92051830067656,0,5.19932915552294,5.65197794218874,5.51257261908397,0,2.3440060335714,1.57057123192139,0,0,0.485510353031154,21.2765622378726,20.0726323814639,15.6014739337429,4.69434806608824,3.2703773457067,2.63623419281366,5.8328969722285,1.67983705950435,0,5.70460860596304,10.8804321301702,9.41062637598899,13.6347501099052,15.1862723167541,9.7977697532714,9.71119012126069,8.46385566835253,8.87363964908651,2.71075625655306,5.33576877666684,2.2497492932035,1.97773272513395,2.1314403448383,2.39680088414724,1.15265491596466,11.3021677416241,9.45041568321835,8.62332341540666,10.5690864229407,8.1721360152097,11.2691535277758,8.14686503655009,7.35375029288017,18.7196997698961,19.2807880508633,18.1255709242367,9.89147157976454,10.7955419450843,10.4182674111352,12.0048689570594,19.1339287410771,18.6413862287708,22.9810296669461,23.0642122894547,18.2671456908795,8.40560745998343,13.6028808192214,17.3918693221007,6.88339101585109,2.719885334831,8.09554787456726,9.74664626171504,4.92829575807069,9.83110940922263,15.3387290320252,9.09251016110041,6.71345191569646,17.8871143116384,14.115912515575,7.64415719119937,7.11066703153331,5.84525810730278,8.86759529162845,7.07734223020697,8.10705546005326,17.3488382043605,16.7739617143252,9.02123699183906,14.0054120023585,10.6083128737787,10.5505848386836,17.1679512418129,9.80199412371469,4.94389935468748,30.7996630239412,0.884610551949874,11.8089800461609,7.28777010919299,12.1218813283806,13.0474232852686,30.4492028892009,19.0596503200244,7.40825460104915,8.50687383992034,4.79922184794726,7.87835407853001,35.0510096207285,26.5350349634803,25.8847965352501,30.0716073932638,25.8272611903634,28.8825381937789,24.1739481970959,19.8586759508117,10.698999472468,15.1633655060205,26.5156738416957,19.9084277732937,11.4951052216736,21.0672691872259,19.1395118651358,19.7986212530364,24.0853794135518,16.3978017979525,27.1638539275966,13.5807835547691,23.8273661011452,25.5129130037726,18.4124415239163,28.9169139194622,24.3776516565517,23.8707278233214,16.5198441459349,6.31991868581911,4.11756651383544,5.39910648851626,11.8061690345236,12.8989332989603,10.4435995647389,12.7842157216014,11.6090896730968,14.1925743856388,14.8821724640261,8.31647544338819,10.1585847859437,11.1900697941167,13.1333971263276,12.1603214318784,11.4035990191759,15.3685080703735,12.6154033634749,30.0714626446702,33.9585220851639,4.62586296177317,8.72686869989696,18.5560777965654,14.1664369834868,15.0774929746849,11.2942773789072,13.3426826306922,10.6526350623033,6.16887780007865,11.3642278759568,11.0587491872119,14.523822459004,11.8928093142663,6.29173586057955,9.07779809473716,7.36822711041159,6.44870863240478,16.4517858158009,18.0332377076929,15.2738495883986,14.1585315632367,13.4660774189412,16.3150265780584,18.8940989413891,13.9728867778824,14.3140710149289,12.7474629647474,6.67380422864376,6.4864468387357,5.17182858485164,5.07150303471257,6.99413763282009,3.56476192493988,6.04161888646702,3.72911021582581,6.04035109013779,7.18841032636773,11.1642284300551,7.80094182786401,8.08252409430758,6.63770430031075,10.1313139486307,14.041242452662,12.3169417650815,16.4594626206446,14.9375675482166,15.7242466353296,18.0906758037161,13.8065311713888,10.3420833364633,24.2758121923534,17.9386398615508,15.4671125597762,19.8274610806043,16.7504432409919,15.3328002096402,6.03165135757089,3.26343410291226,18.6870423747234,28.1455481230827,34.5183768473753,25.5521476771003,19.8361283905777,13.6334300690361,14.5133780931478,13.2749173060857,15.2950612390287,16.010909462821,17.8238939265915,14.1538265394416,18.2164815753702,11.6902343164525,21.7408277870588,24.7417413644791,25.8330955079049,10.1497394090335,19.3835481630756,26.5601897985782,18.5843193675948,10.6823479908192,6.04647113929502,12.6365403436452,8.26845300066164,12.2974059177571,12.4045580720746,11.2695456138027,19.250858432775,16.4339114126624,15.8127912862498,12.3762651897824,27.5756080660568,18.9064148732876,7.63216234318252,14.1462443120851,22.699549906211,14.2695054081656,16.6194510808142,11.8741330154694,8.21350978222986,7.41412248023371,20.2886126210565,19.1268053412117,24.8655217111695,22.1951563735614,18.9802026964987,18.5479216711919,4.66369338607761,27.999220603587,5.98048082792484,12.7959858137198,11.8524497516615,7.15800136617826,7.92826520781946,4.57556346413045,10.1987057996313,12.1757763521582,11.746997773376,10.5013767981662,18.5056556244964,14.84232110026,15.0127423742304,14.6361807210128,14.41192920724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| ||
|short_description=p1@D3Ertd254e | |short_description=p1@D3Ertd254e | ||
}} | }} |
Latest revision as of 23:31, 1 October 2015
Short description: | p1@D3Ertd254e |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_D3Ertd254e_5end |
Coexpression cluster: | MCL_coexpression_mm9:1301 |
Association with transcript: | 0bp_to_NM_001101478, uc008ozg.2_5end |
EntrezGene: | D3Ertd254e |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ecto-epithelium | 7.44e-13 | 73 |
ectoderm-derived structure | 8.92e-11 | 95 |
ectoderm | 8.92e-11 | 95 |
presumptive ectoderm | 8.92e-11 | 95 |
neurectoderm | 1.38e-09 | 64 |
neural plate | 1.38e-09 | 64 |
presumptive neural plate | 1.38e-09 | 64 |
pre-chordal neural plate | 2.48e-08 | 49 |
structure with developmental contribution from neural crest | 1.28e-07 | 92 |
regional part of nervous system | 1.96e-07 | 54 |
occipital lobe | 3.39e-07 | 10 |
visual cortex | 3.39e-07 | 10 |
neocortex | 3.39e-07 | 10 |
neural tube | 4.37e-07 | 52 |
neural rod | 4.37e-07 | 52 |
future spinal cord | 4.37e-07 | 52 |
neural keel | 4.37e-07 | 52 |