FFCP PHASE1:Mm9::chr11:68829575..68829637,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=68964 | |EntrezGene=68964 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=912 | |||
|TSSclassifier=NA | |||
|UniProt=Q5SUQ9,E0CXT1 | |UniProt=Q5SUQ9,E0CXT1 | ||
|association_with_transcript=0bp_to_ENSMUST00000116359,ENSMUST00000146621,ENSMUST00000152979_5end | |association_with_transcript=0bp_to_ENSMUST00000116359,ENSMUST00000146621,ENSMUST00000152979_5end | ||
|cluster_id=chr11:68829575..68829637,+ | |||
|description=CAGE_peak_1_at_1500010J02Rik_5end | |description=CAGE_peak_1_at_1500010J02Rik_5end | ||
|id=chr11:68829575..68829637,+ | |id=chr11:68829575..68829637,+ | ||
|ontology_enrichment_celltype=CL:0002319!1.55e-07!43;CL:0000540!1.56e-07!33;CL:0000047!1.56e-07!33;CL:0000031!1.56e-07!33;CL:0000404!1.56e-07!33;CL:0000221!3.77e-07!44;CL:0000133!3.77e-07!44;CL:0000117!7.95e-07!23;CL:0000337!7.95e-07!23 | |ontology_enrichment_celltype=CL:0002319!1.55e-07!43;CL:0000540!1.56e-07!33;CL:0000047!1.56e-07!33;CL:0000031!1.56e-07!33;CL:0000404!1.56e-07!33;CL:0000221!3.77e-07!44;CL:0000133!3.77e-07!44;CL:0000117!7.95e-07!23;CL:0000337!7.95e-07!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.55e-07,43;CL:0000540,1.56e-07,33;CL:0000047,1.56e-07,33;CL:0000031,1.56e-07,33;CL:0000404,1.56e-07,33;CL:0000221,3.77e-07,44;CL:0000133,3.77e-07,44;CL:0000117,7.95e-07,23;CL:0000337,7.95e-07,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.28e-10!71;UBERON:0003075!2.28e-10!71;UBERON:0007284!2.28e-10!71;UBERON:0001017!2.33e-10!73;UBERON:0005743!2.33e-10!73;UBERON:0000073!1.22e-09!75;UBERON:0001016!1.22e-09!75;UBERON:0003056!8.89e-09!49;UBERON:0004121!1.83e-08!102;UBERON:0000924!1.83e-08!102;UBERON:0006601!1.83e-08!102;UBERON:0000033!2.91e-07!63;UBERON:0001049!3.05e-07!52;UBERON:0005068!3.05e-07!52;UBERON:0006241!3.05e-07!52;UBERON:0007135!3.05e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.29e-10,64;UBERON:0003075,2.29e-10,64;UBERON:0007284,2.29e-10,64;UBERON:0001017,2.33e-10,73;UBERON:0001016,1.22e-09,75;UBERON:0010314,4.24e-09,92;UBERON:0003056,8.89e-09,49;UBERON:0004121,3.11e-08,95;UBERON:0000924,3.11e-08,95;UBERON:0006601,3.11e-08,95;UBERON:0010371,2.09e-07,73;UBERON:0001049,3.05e-07,52;UBERON:0005068,3.05e-07,52;UBERON:0006241,3.05e-07,52;UBERON:0007135,3.05e-07,52;UBERON:0000073,4.36e-07,54 | |||
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|phase1_expression=17.4562243344225,2.44282785347553,1.81999695755814,5.44435580352294,3.00537437967808,9.23335995515394,10.5125688267987,12.5249623738329,4.22366166455,4.68129052643987,5.65019295144166,6.38177271962691,9.41604014621631,10.8401298999557,11.6588416635482,15.9955461237963,22.3859801001007,11.1989068702174,14.1227866613911,15.7024171165271,15.9881385484011,21.0496816545877,19.3287843962812,11.1994695955385,7.34109699414944,2.8711598205751,4.30761996159075,3.23206849028834,7.41091335879858,4.53654233567875,6.65191531965914,40.6419631014164,33.8285633171514,0,18.1976520443303,14.1299448554718,16.3335485009895,13.393012183581,8.5946887897618,7.85285615960697,7.05877785637217,6.14740936462601,4.85510353031154,15.8629990649227,17.2340783073175,20.74078299427,26.6013057078333,28.9973457985994,16.2567775223509,16.7209713203884,27.017379373695,21.5628846547457,16.9460432118314,10.1550699881588,10.7550015725588,11.3194151855817,10.0286703978565,6.18806510732931,33.3822160418336,54.4860708650194,27.8885817542719,25.4133399051849,32.014612660001,14.8483453351431,22.7439263390404,14.9200824138681,27.2636100571748,34.5796474789399,32.2474694279366,39.4217339928537,32.1797190867615,23.4233807211119,23.412065340871,37.1147121621311,43.5138438422793,33.0918763179608,20.9220173898839,19.5361627270337,17.050325191443,35.0817525362316,42.7247295623253,42.7148963856543,18.9844439320939,18.0084035210138,19.0997809721013,27.4004584490511,25.3421591822403,28.1463163196204,5.45228591998925,17.8348881852014,11.5945795480671,4.30211938490693,0,2.15881276655127,1.29955283489534,2.24013443548668,10.6737759300131,15.1682987094471,9.35229616570328,10.9535268098205,13.661811718338,10.2661181931454,2.54805239706646,7.11066703153331,15.8038459938186,15.454951793981,12.6381111253696,5.25245846707676,15.7952109024775,13.8051189330287,29.8394762037754,20.7036525252256,26.2901666871907,18.0867168663147,19.9900802130698,17.8446559688139,8.65182387070309,12.2909453381925,22.9998743506967,11.3236794963186,14.3546986999256,12.1218813283806,7.45567044872489,20.4946557908083,25.3430515244281,12.2619386500124,17.7326384268762,9.59844369589452,18.0439722443752,25.9137806170343,19.2150253183823,38.8271948028751,23.1186345855728,24.0372529890511,23.0644729461112,18.6577452527921,20.3678727700633,15.1776504144313,17.4378703319236,15.7831391914855,43.9807097213939,27.8181546364502,33.6716182736003,30.2916683849787,36.3314905468091,33.8220221552003,32.9830070450246,24.8355235909455,56.6943821413375,44.8181409997732,38.5332961919048,29.372228145295,20.5754964426942,20.1986256582857,18.7261744131229,31.4474141573219,20.3641824320838,14.9261786126535,15.6289924667576,36.6612617387838,37.7586956569565,28.8099298337624,41.4303287274118,31.8758055430794,31.3162239161378,28.3691412595498,19.5839583021722,24.1704258700041,25.6713365865029,17.0734162642259,13.0520783368828,11.2573990317506,8.78200461164202,11.1391327571109,17.6643556793867,37.0456604565424,9.58214470653014,8.72686869989696,38.6051733468773,33.4420807479031,32.0879978692012,23.7986559055544,16.6783532883653,19.2127882373685,11.3886974770683,10.3760341476127,10.8074139784116,15.7175612912509,12.2827374885046,8.08937467788799,10.3746263939853,8.36393347668342,33.5712184686955,28.6763766650419,42.8289395557706,26.8819752755815,27.5412531778029,21.3212892466568,19.9827457312653,13.8753539100826,16.9558626068685,11.9695249004147,5.03969466048153,27.6962875488716,24.176756398924,26.084005036643,26.3718157805054,21.2235900582127,18.8423130318251,15.247895284893,12.4844124616777,13.453509246216,23.0029130443767,14.8856379067401,13.4176199439261,13.639259409144,13.9929982547091,4.82443521363367,11.2699446001629,31.4555743539005,36.9930496523399,29.3658998391075,31.4484932706593,28.8110762799923,19.0434912708811,12.8788207586147,20.0196633014863,15.0595988961167,14.1914744105164,10.4872521418072,12.9513736399422,8.53429445630918,7.53956419696361,8.15858525728064,5.90117127622843,10.7615331058846,13.3256989689867,16.2924244363162,17.3771042099276,10.3513080153793,22.4010835785542,21.8645696806118,31.6672394667214,25.091723785018,22.5026660823218,15.8522857241746,23.4790206971439,25.7185154961954,30.4371589018823,21.8498495166829,22.710413633323,32.764071074775,22.6412873501471,18.9715641418416,3.98235415019888,32.5326052447675,30.8370028104046,16.2200368590072,12.993283286754,18.1386737286917,9.8202751403924,11.9966130727577,14.9728898921583,6.95280867458795,3.16255825724996,14.4389760547462,13.9580238359053,35.1119133361055,39.5837572375229,28.7211626942334,28.9064580836906,27.2904290931168,26.3278432963394,24.6616608782825,10.560226862867,8.47328283455281,10.5853631066382,14.0153315000258,14.0474051225438,16.8273060549555,14.8021706563889,12.6388492803697,11.3677526285642,20.2113579191456,17.7705716029767,28.8941615148511,25.1864557222808,28.2552685507037,26.5186801778789,22.8778173206523,19.3775410192995,20.0130576822831,17.274996725553,10.5013767981662,44.2870391013589,29.6846422005199,24.409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| ||
|short_description=p1@1500010J02Rik | |short_description=p1@1500010J02Rik | ||
}} | }} |
Latest revision as of 23:36, 1 October 2015
Short description: | p1@1500010J02Rik |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_1500010J02Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:912 |
Association with transcript: | 0bp_to_ENSMUST00000116359, ENSMUST00000146621, ENSMUST00000152979_5end |
EntrezGene: | 1500010J02Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.55e-07 | 43 |
neuron | 1.56e-07 | 33 |
neuronal stem cell | 1.56e-07 | 33 |
neuroblast | 1.56e-07 | 33 |
electrically signaling cell | 1.56e-07 | 33 |
ectodermal cell | 3.77e-07 | 44 |
neurectodermal cell | 3.77e-07 | 44 |
CNS neuron (sensu Vertebrata) | 7.95e-07 | 23 |
neuroblast (sensu Vertebrata) | 7.95e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 2.29e-10 | 64 |
neural plate | 2.29e-10 | 64 |
presumptive neural plate | 2.29e-10 | 64 |
central nervous system | 2.33e-10 | 73 |
nervous system | 1.22e-09 | 75 |
structure with developmental contribution from neural crest | 4.24e-09 | 92 |
pre-chordal neural plate | 8.89e-09 | 49 |
ectoderm-derived structure | 3.11e-08 | 95 |
ectoderm | 3.11e-08 | 95 |
presumptive ectoderm | 3.11e-08 | 95 |
ecto-epithelium | 2.09e-07 | 73 |
neural tube | 3.05e-07 | 52 |
neural rod | 3.05e-07 | 52 |
future spinal cord | 3.05e-07 | 52 |
neural keel | 3.05e-07 | 52 |
regional part of nervous system | 4.36e-07 | 54 |