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FFCP PHASE1:Mm9::chr16:3884629..3884652,+: Difference between revisions

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{{FFCP|EntrezGene=74763|HGNC=|UniProt=Q9DBU2|association_with_transcript=10bp_to_NM_029090,uc007xyv.1,uc007xyw.1_5end|description=CAGE_peak_4_at_Nat15_5end|id=chr16:3884629..3884652,+|ontology_enrichment_celltype=CL:0000117!3.20e-10!23;CL:0000337!3.20e-10!23|ontology_enrichment_celltype_v019_2=CL:0000117,3.20e-10,23;CL:0000337,3.20e-10,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!1.43e-10!34;UBERON:0001049!2.13e-09!52;UBERON:0005068!2.13e-09!52;UBERON:0006241!2.13e-09!52;UBERON:0007135!2.13e-09!52;UBERON:0001017!1.20e-08!73;UBERON:0005743!1.20e-08!73;UBERON:0000073!2.68e-08!75;UBERON:0001016!2.68e-08!75;UBERON:0004121!3.73e-08!102;UBERON:0000924!3.73e-08!102;UBERON:0006601!3.73e-08!102;UBERON:0002791!9.92e-08!29;UBERON:0003528!9.92e-08!29;UBERON:0001893!9.92e-08!29;UBERON:0002346!1.34e-07!71;UBERON:0003075!1.34e-07!71;UBERON:0007284!1.34e-07!71;UBERON:0000955!3.13e-07!50;UBERON:0006238!3.13e-07!50;UBERON:0002616!8.93e-07!49;UBERON:0000033!9.70e-07!63|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.43e-10,34;UBERON:0001049,2.13e-09,52;UBERON:0005068,2.13e-09,52;UBERON:0006241,2.13e-09,52;UBERON:0007135,2.13e-09,52;UBERON:0000073,3.66e-09,54;UBERON:0004121,6.86e-09,95;UBERON:0000924,6.86e-09,95;UBERON:0006601,6.86e-09,95;UBERON:0001017,1.20e-08,73;UBERON:0002346,1.37e-08,64;UBERON:0003075,1.37e-08,64;UBERON:0007284,1.37e-08,64;UBERON:0010371,1.92e-08,73;UBERON:0001016,2.68e-08,75;UBERON:0003528,9.92e-08,29;UBERON:0002791,9.92e-08,29;UBERON:0001893,9.92e-08,29;UBERON:0000955,3.82e-07,47;UBERON:0006238,3.82e-07,47|phase1_expression=2.5623815536767,4.53668029931169,5.45999087267443,5.74682001482977,8.5152274090879,3.86122325397347,4.67225281191051,4.13194635013044,5.06839399746,3.97909694747389,5.13653904676515,3.74929147278081,5.82082481766099,5.50748535239684,2.99798785634096,3.23960427823721,4.89693314689703,5.67831897644828,6.17014951225825,3.81950686618227,4.16712121740242,3.3758923408301,2.87319768052829,3.67982572424835,6.19405058881359,9.18771142584032,5.59990595006797,6.24866574789078,7.9809836171677,7.81293402255785,6.20845429834853,0,1.84519436275371,0,3.75507105676657,4.65457007003779,3.47087905646027,16.7412652294763,9.37602413428561,14.1351410872926,12.3528612486513,15.0270006690858,16.5073520030592,2.89562681343828,3.64956952390252,2.75320128242522,7.04152209913235,6.5407546914134,4.83309602015838,4.47188767870852,4.33957907038624,1.43752564364972,4.19456515144341,2.17608642603403,4.03312558970957,1.80081605225163,2.0057340795713,3.6097046459421,13.9598357993122,10.0508286061686,14.5781222806421,3.72728985276045,3.55717918444456,7.19919773825119,0,6.3943210345149,7.19040265244171,8.06858441175265,6.63613518774257,7.1553147315796,7.57169860864975,15.7108041422092,12.1477697523387,7.83941114975706,6.51749202924007,7.35375029288017,4.40463523997555,3.95830748064082,7.37311359629969,11.4741070325269,11.7104183811084,5.2091337055676,8.09630697104005,5.06486349028512,7.02871939773326,11.1958862479994,13.810053037513,11.183966749518,3.71058347332602,4.1564358058732,5.50742528533188,6.88339101585109,3.39985666853875,10.2543606411185,8.4470934268197,6.72040330646003,6.88177658645584,3.40860645156115,1.55871602761721,4.24007489412408,5.35204995151386,3.84979432242953,5.09610479413291,0,3.68034769719064,4.56047757855178,1.51657333504435,4.33898742932428,6.99132285847364,4.00793775475027,2.4287945747259,2.43572382649713,6.22661842591358,3.46662073271032,5.76184664964954,5.15233024451669,4.94389935468748,4.62717942143717,5.30766331169925,4.36770494858005,3.97514733228708,1.45462575940567,5.59175283654366,5.5628351432194,5.65506108396329,5.62005521458901,3.23500836165985,2.39961092397363,3.30382590389968,4.49371918214468,5.94750783664214,10.4293112253677,6.25767552692195,6.13717097592793,7.48036960414416,7.30085683804909,4.07357455401265,4.72746488318353,8.08712826987759,7.78634866779954,2.86264974517948,4.13823787980251,3.42118046630164,3.61691562805716,5.03470093719826,4.99643509110914,5.34099829990454,4.9153640440413,3.23351989399263,2.83659120251729,4.22282697993477,5.91828477554452,3.33656699070717,4.179025998266,5.96768195583036,2.9855140022774,2.1066395619397,2.57347907114715,2.84163499395593,3.93538967817454,3.04883877975425,3.6012412292203,5.20838418287463,3.34499193970586,3.08534225774756,3.95307706075693,2.95100741539581,2.80236821681207,3.62031669809657,6.7308660272429,6.24229833503089,4.09359964790931,4.17145219052996,2.95254121272818,7.36014819974445,7.10041825417063,15.1992640172547,4.23120906661671,3.83918850963421,3.25131340604614,2.06187938115349,3.83198696784351,3.33567065767305,2.85338439168839,9.01605216934572,4.94096864172033,5.27803938480566,6.56556357735798,6.43381487493096,4.49409704327111,6.26800344636613,9.55878111620963,3.60369011810855,2.62771579002376,0,2.64746726198909,2.71533482034676,4.41855665309007,5.1853960441891,5.75679577120448,6.90794402502049,3.57851775373222,7.11486305009157,2.00214126859313,2.1621489462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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=74763
|HGNC=
|TSSclassifier=NA
|UniProt=Q9DBU2
|association_with_transcript=10bp_to_NM_029090,uc007xyv.1,uc007xyw.1_5end
|cluster_id=chr16:3884629..3884652,+
|description=CAGE_peak_4_at_Nat15_5end
|id=chr16:3884629..3884652,+
|ontology_enrichment_celltype=CL:0000117!3.20e-10!23;CL:0000337!3.20e-10!23
|ontology_enrichment_celltype_v019_2=CL:0000117,3.20e-10,23;CL:0000337,3.20e-10,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.43e-10,34;UBERON:0001049,2.13e-09,52;UBERON:0005068,2.13e-09,52;UBERON:0006241,2.13e-09,52;UBERON:0007135,2.13e-09,52;UBERON:0000073,3.66e-09,54;UBERON:0004121,6.86e-09,95;UBERON:0000924,6.86e-09,95;UBERON:0006601,6.86e-09,95;UBERON:0001017,1.20e-08,73;UBERON:0002346,1.37e-08,64;UBERON:0003075,1.37e-08,64;UBERON:0007284,1.37e-08,64;UBERON:0010371,1.92e-08,73;UBERON:0001016,2.68e-08,75;UBERON:0003528,9.92e-08,29;UBERON:0002791,9.92e-08,29;UBERON:0001893,9.92e-08,29;UBERON:0000955,3.82e-07,47;UBERON:0006238,3.82e-07,47
|phase1_expression=2.5623815536767,4.53668029931169,5.45999087267443,5.74682001482977,8.5152274090879,3.86122325397347,4.67225281191051,4.13194635013044,5.06839399746,3.97909694747389,5.13653904676515,3.74929147278081,5.82082481766099,5.50748535239684,2.99798785634096,3.23960427823721,4.89693314689703,5.67831897644828,6.17014951225825,3.81950686618227,4.16712121740242,3.3758923408301,2.87319768052829,3.67982572424835,6.19405058881359,9.18771142584032,5.59990595006797,6.24866574789078,7.9809836171677,7.81293402255785,6.20845429834853,0,1.84519436275371,0,3.75507105676657,4.65457007003779,3.47087905646027,16.7412652294763,9.37602413428561,14.1351410872926,12.3528612486513,15.0270006690858,16.5073520030592,2.89562681343828,3.64956952390252,2.75320128242522,7.04152209913235,6.5407546914134,4.83309602015838,4.47188767870852,4.33957907038624,1.43752564364972,4.19456515144341,2.17608642603403,4.03312558970957,1.80081605225163,2.0057340795713,3.6097046459421,13.9598357993122,10.0508286061686,14.5781222806421,3.72728985276045,3.55717918444456,7.19919773825119,0,6.3943210345149,7.19040265244171,8.06858441175265,6.63613518774257,7.1553147315796,7.57169860864975,15.7108041422092,12.1477697523387,7.83941114975706,6.51749202924007,7.35375029288017,4.40463523997555,3.95830748064082,7.37311359629969,11.4741070325269,11.7104183811084,5.2091337055676,8.09630697104005,5.06486349028512,7.02871939773326,11.1958862479994,13.810053037513,11.183966749518,3.71058347332602,4.1564358058732,5.50742528533188,6.88339101585109,3.39985666853875,10.2543606411185,8.4470934268197,6.72040330646003,6.88177658645584,3.40860645156115,1.55871602761721,4.24007489412408,5.35204995151386,3.84979432242953,5.09610479413291,0,3.68034769719064,4.56047757855178,1.51657333504435,4.33898742932428,6.99132285847364,4.00793775475027,2.4287945747259,2.43572382649713,6.22661842591358,3.46662073271032,5.76184664964954,5.15233024451669,4.94389935468748,4.62717942143717,5.30766331169925,4.36770494858005,3.97514733228708,1.45462575940567,5.59175283654366,5.5628351432194,5.65506108396329,5.62005521458901,3.23500836165985,2.39961092397363,3.30382590389968,4.49371918214468,5.94750783664214,10.4293112253677,6.25767552692195,6.13717097592793,7.48036960414416,7.30085683804909,4.07357455401265,4.72746488318353,8.08712826987759,7.78634866779954,2.86264974517948,4.13823787980251,3.42118046630164,3.61691562805716,5.03470093719826,4.99643509110914,5.34099829990454,4.9153640440413,3.23351989399263,2.83659120251729,4.22282697993477,5.91828477554452,3.33656699070717,4.179025998266,5.96768195583036,2.9855140022774,2.1066395619397,2.57347907114715,2.84163499395593,3.93538967817454,3.04883877975425,3.6012412292203,5.20838418287463,3.34499193970586,3.08534225774756,3.95307706075693,2.95100741539581,2.80236821681207,3.62031669809657,6.7308660272429,6.24229833503089,4.09359964790931,4.17145219052996,2.95254121272818,7.36014819974445,7.10041825417063,15.1992640172547,4.23120906661671,3.83918850963421,3.25131340604614,2.06187938115349,3.83198696784351,3.33567065767305,2.85338439168839,9.01605216934572,4.94096864172033,5.27803938480566,6.56556357735798,6.43381487493096,4.49409704327111,6.26800344636613,9.55878111620963,3.60369011810855,2.62771579002376,0,2.64746726198909,2.71533482034676,4.41855665309007,5.1853960441891,5.75679577120448,6.90794402502049,3.57851775373222,7.11486305009157,2.00214126859313,2.16214894624523,4.27238013531222,3.04290182082754,2.17059443777175,4.07401362850272,1.72617682470486,4.37765112292595,5.76578967694971,2.87536413054709,6.32639611036456,5.92871578917665,6.81962970457202,8.25228102200796,7.71909634181387,4.98833613449833,2.08440552947533,3.58522948172457,2.54617628662782,5.16318546234705,2.34508760418542,2.85652369063216,6.24427673144956,5.83250033192907,5.3151525515706,5.89982644032702,4.09658286789345,8.11619414769709,5.49666422609744,4.52373851817817,7.07077388964322,0.983528546038072,5.24279817978992,6.90367536947505,5.97779601620236,2.78689407140348,3.7870639080656,5.36363973007636,4.68526493155966,4.09304455692318,3.34556317133573,3.34198011123591,5.37845408498782,2.02405350837447,3.79932615284705,1.58115111178609,12.2102100240287,3.40656204499845,3.73937767701236,5.86393053672874,4.78413356620353,2.65490276679926,1.45668381692989,3.02323556964751,2.45186603682668,2.65771703592696,4.91896236710284,6.20227903603731,3.99887102425256,2.13898427030833,5.37262488490887,5.27093042874994,6.18813259489121,2.04263763452273,3.24109969256358,3.36332577835162,3.00071849044229,4.25616560741457,3.74574516964348,5.26556865926787,2.43571959291679,5.39744928546534,6.14313005505079,3.52845436887939,6.76033637060068,3.87514624070173,6.81536051688161,5.72987251215055,5.9090723908222,5.24665505933731,6.48988557036784,2.56306321196779,2.06386867963222,3.51869602002452,3.01389531207506,3.8274383761887,4.34678529092393,3.39956859987711,4.3384950220334,4.14599921413271,7.63736494412091,3.16335993581135,3.45643094115643,3.02414954301044,4.18176592028937,4.36725127492355,3.64133735239016,4.79390043206948,4.4498510137285,6.99920855775682,6.21339313086926,2.25477175473676,2.54178128274764,2.31641886639937,5.25018208528929,2.19571699912143,3.37912250981556,3.16864544343536,3.9061315453185,3.14578033277133,3.38217769156408,4.32045009386798,2.21207784439725,2.8381530140623,2.77319584345034,4.02754551231165,3.58053391334963,3.17890167650024,2.52410443991935,2.80610101631697,3.02899349844443,3.27689268616499,2.41982844328417,2.82627854145282,2.79014340756955,3.97381467417334,5.8949899739955,1.55390167361845,0.986852422704233,1.51096154727671,4.63655025677257,4.69206188627955,4.02933573387983,3.85863082342319,5.01572104035363,4.51801474093653,6.44455331110048,4.01026859407578,8.07709957015332,5.48066015816514,6.7985450765073,5.40018000185445,5.40385443869065,4.07828168085784,5.1776031175182,4.77421798887213,7.98049746802062,5.29274177837816,3.8897074730927,3.35381060204772,4.22840069435032,1.55572709461131,4.12070114477788,2.56735367673452,3.03236654116557,2.78827229879264,3.58390048633545,5.3375659257833,3.90553429669703,6.31790158511746,2.38146845641537,4.28772005995965,4.43691207066522,7.00546031365621,4.71036544430071,3.08582327146874,4.61437096014278,2.86123427936785,3.19762116591123,4.51725025993587,4.23073039458383,3.47563148458268,4.20911538300549,4.75314398460516,3.36685362994643,4.38949567059444,4.62971067165148,5.72923460437565,4.95797891795091,3.2794123866794,8.74337022782811,4.67863216890817,6.66100267549725,5.35607329792761,5.7353768971074,3.47801753430632
|short_description=p4@Nat15
}}

Latest revision as of 00:14, 2 October 2015

Short description:p4@Nat15
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Nat15_5end
Coexpression cluster:NA
Association with transcript: 10bp_to_NM_029090, uc007xyv.1, uc007xyw.1_5end
EntrezGene:Nat15
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Nat15

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.56
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.54
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.46
CD326+ enterocyte, pool1.CNhs13542.11848-124I35.75
CD326+ enterocyte, pool2.CNhs13197.11849-124I48.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.86
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.67
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E75.07
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.98
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E65.14
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.75
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E45.82
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E85.51
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.24
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.90
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.68
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A46.17
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.82
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.87
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.68
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.19
GP2+ M cell, pool1.CNhs13228.11845-124H99.19
GP2+ M cell, pool2.CNhs13231.11846-124I15.60
GP2+ M cell, pool3.CNhs13240.11847-124I26.25
Ileum epithelium, pool1.CNhs13199.10252-104B97.98
Ileum epithelium, pool2.CNhs13232.10253-104C17.81
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C86.21
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.76
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.65
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G816.74
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H19.38
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H314.14
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G912.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H215.03
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H416.51
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.90
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.65
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.75
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.04
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C26.54
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.83
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.47
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.34
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.19
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.03
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.80
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.61
Mouse Granule cells, donor1.CNhs12131.11713-123C313.96
Mouse Granule cells, donor2.CNhs12357.11731-123E310.05
Mouse Granule cells, donor3.CNhs12108.11636-122C714.58
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.73
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C77.20
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D26.39
Mouse Microglia, donor1.CNhs12629.11718-123C87.19
Mouse Microglia, donor2.CNhs12634.11736-123E88.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.64
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.16
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.57
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F115.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D512.15
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.84
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.52
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D67.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.96
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.37
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D411.47
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F411.71
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.10
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.06
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.03
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D611.20
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F613.81
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E111.18
Mouse Schwann, donor1.CNhs12507.11728-123D93.71
Mouse Schwann, donor2.CNhs12573.11746-123F94.16
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.51
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.88
Mouse hepatocyte, donor1.CNhs13078.11714-123C43.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C810.25
Mouse hepatocyte, donor6.CNhs13090.11822-124F48.45
Mouse hepatocyte, donor8.CNhs13091.11824-124F66.72
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.88
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.41
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.24
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.35
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.68
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.56
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.34
accessory axillary lymph node, adult.CNhs10475.1063-29H96.99
adrenal gland, adult.CNhs10508.49-24D74.01
adrenal gland, embryo E14.CNhs11038.406-44C52.43
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I16.23
adrenal gland, embryo E18.CNhs11026.1262-18F53.47
adrenal gland, neonate N00.CNhs11191.1311-23C15.76
adrenal gland, neonate N25.CNhs11223.1377-27I35.15
amnion, adult pregnant day17.5.CNhs10488.583-22A84.94
aorta, adult.CNhs10498.46-23H14.63
bone (os femoris), adult.CNhs10483.56-12G25.31
bone (os femoris), neonate N02.CNhs11227.1985-43F54.37
bone (os femoris), neonate N16.CNhs11225.1525-43A63.98
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B25.56
cerebellum, neonate N30.CNhs11135.1395-42I25.66
colon, adult.CNhs10468.36-18H75.62
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.30
corpora quadrigemina, adult.CNhs10501.16-22A44.49
corpus striatum, adult.CNhs10487.19-21D85.95
corpus striatum, neonate N00.CNhs11226.630-43F110.43
cortex, adult.CNhs10473.12-14D56.26
cortex, neonate N30.CNhs11107.1392-42F26.14
diencephalon, adult.CNhs10482.20-12F27.48
diencephalon, neonate N30.CNhs11201.1388-42B27.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.07
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.73
epididymis, adult.CNhs10490.58-23B28.09
eyeball, adult.CNhs10484.31-12G47.79
eyeball, embryo E12.CNhs11016.345-16C62.86
eyeball, embryo E14.CNhs10521.399-16E24.14
eyeball, embryo E15.CNhs10593.426-16C93.42
eyeball, embryo E17.CNhs11023.1261-18D43.62
eyeball, neonate N00.CNhs11207.633-15C65.03
eyeball, neonate N01.CNhs11140.1532-43E75.00
eyeball, neonate N02.CNhs11205.1551-44G85.34
eyeball, neonate N16.CNhs11188.777-19A24.92
forelimb, embryo E11.CNhs10596.335-25E23.23
forelimb, embryo E12.CNhs10600.359-14H22.84
forelimb, embryo E13.CNhs10589.384-1E24.22
forelimb, embryo E14.CNhs10577.413-26A85.92
forelimb, embryo E15.CNhs11007.437-20E73.34
forelimb, embryo E17.CNhs10598.1517-43C44.18
forelimb, embryo E18.CNhs11008.1520-43B55.97
gonad, embryo E13.CNhs11044.1564-45I62.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.57
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.84
heart, embryo E11.CNhs10586.331-24E93.94
heart, embryo E12.CNhs11015.353-12F53.05
heart, embryo E13.CNhs11013.376-3I93.60
heart, embryo E14.CNhs10597.403-26D45.21
heart, embryo E15.CNhs11017.431-16C83.34
heart, embryo E16.CNhs11021.457-17C63.09
heart, embryo E17.CNhs11025.479-18E53.95
heart, embryo E18.CNhs11030.1283-20G32.95
heart, neonate N00.CNhs11213.639-21E32.80
heart, neonate N03.CNhs11221.1349-25I23.62
heart, neonate N10.CNhs11118.749-24G16.73
heart, neonate N16.CNhs11209.782-15G16.24
heart, neonate N20.CNhs11127.821-26I64.09
heart, neonate N25.CNhs11196.1351-25D34.17
heart, neonate N30.CNhs11202.1390-42D22.95
hippocampus, adult.CNhs10478.13-16E87.36
hippocampus, neonate N00.CNhs11228.627-43G17.10
intestinal mucosa, adult.CNhs10506.860-29I315.20
intestine, adult.CNhs10496.178-9A34.23
intestine, embryo E12.CNhs11019.1251-16I53.84
intestine, embryo E13.CNhs11010.381-16D53.25
intestine, embryo E15.CNhs10602.976-16D82.06
intestine, embryo E16.CNhs10585.463-22H43.83
intestine, embryo E17.CNhs10582.482-18D33.34
intestine, embryo E18.CNhs10526.1289-20F72.85
intestine, neonate N00.CNhs11126.644-26D19.02
intestine, neonate N01.CNhs11192.1322-23E94.94
intestine, neonate N06.CNhs11102.688-20B85.28
intestine, neonate N07.CNhs11095.720-20F26.57
intestine, neonate N10.CNhs11098.755-23A56.43
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E36.27
intestine, neonate N30.CNhs11131.1384-42G19.56
kidney, embryo E14.CNhs10606.411-4I93.60
kidney, embryo E15.CNhs10997.434-16F82.63
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I22.65
kidney, embryo E18.CNhs11001.1288-20C72.72
kidney, neonate N00.CNhs11214.646-21G74.42
kidney, neonate N10.CNhs11206.758-6D55.19
kidney, neonate N20.CNhs11113.832-19I15.76
kidney, neonate N25.CNhs11122.1353-25F36.91
kidney, neonate N30.CNhs11203.1385-42H13.58
liver, adult pregnant day01.CNhs10466.508-5B27.11
liver, embryo E12.CNhs10601.355-15F82.00
liver, embryo E13.CNhs10524.378-3H62.16
liver, embryo E14.CNhs10594.409-16E14.27
liver, embryo E15.CNhs10520.433-16D73.04
liver, embryo E16.CNhs10523.462-17F52.17
liver, embryo E17.CNhs10510.481-18A34.07
liver, embryo E18.CNhs10579.499-43G41.73
liver, neonate N00.CNhs11117.641-24F44.38
liver, neonate N03.CNhs11123.1345-25G25.77
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H26.33
liver, neonate N10.CNhs11115.751-24B95.93
liver, neonate N20.CNhs11220.823-25A36.82
liver, neonate N25.CNhs11198.1368-26H18.25
liver, neonate N30.CNhs11106.1382-42D17.72
lung, adult.CNhs10474.28-22B14.99
lung, embryo E12.CNhs10522.354-16G22.08
lung, embryo E14.CNhs10604.404-26F83.59
lung, embryo E15.CNhs11020.432-17C52.55
lung, embryo E16.CNhs10998.458-17B65.16
lung, embryo E17.CNhs10605.480-44A62.35
lung, embryo E18.CNhs10583.1287-20I62.86
lung, neonate N00.CNhs11224.640-42C66.24
lung, neonate N06.CNhs11212.683-20E55.83
lung, neonate N07.CNhs11111.715-19A35.32
lung, neonate N10.CNhs11219.750-23E65.90
lung, neonate N20.CNhs11109.822-18A44.10
lung, neonate N25.CNhs11119.1359-25C78.12
lung, neonate N30.CNhs11133.1394-42H25.50
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A17.07
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H25.24
medulla oblongata, adult.CNhs10477.17-12C26.90
medulla oblongata, neonate N30.CNhs11200.1396-42A35.98
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.79
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.79
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.36
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E24.69
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.09
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.35
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.38
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.80
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I912.21
ovary, adult.CNhs10507.91-2I73.41
ovary, embryo E18.CNhs11040.505-44H73.74
ovary, neonate N00.CNhs11217.1299-22I45.86
oviduct, adult pregnant day01.CNhs10500.988-6G64.78
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F23.02
pancreas, embryo E16.CNhs11003.460-26E52.45
pancreas, embryo E17.CNhs10599.1558-45G32.66
pancreas, embryo E18.CNhs10580.1535-43I74.92
pancreas, neonate N00.CNhs11105.645-26G96.20
pancreas, neonate N01.CNhs11138.1531-43D74.00
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B65.37
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E63.24
pituitary gland, embryo E13.CNhs11009.370-44C73.36
pituitary gland, embryo E14.CNhs11037.398-44A53.00
pituitary gland, embryo E15.CNhs10592.427-16B94.26
pituitary gland, embryo E16.CNhs11036.449-43F63.75
pituitary gland, embryo E17.CNhs11039.1265-44F55.27
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I75.40
placenta, adult pregnant day17.CNhs10464.577-18G36.14
prostate, adult.CNhs10470.859-1F83.53
skin, adult.CNhs10492.30-1C36.76
skin, neonate N00.CNhs11124.650-25G43.88
skin, neonate N03.CNhs11215.662-22H36.82
skin, neonate N06.CNhs11097.693-20I55.73
skin, neonate N10.CNhs11108.762-6C45.91
small intestine, neonate N16.CNhs11114.790-21I15.25
spinal cord, adult.CNhs10505.24-13C96.49
spleen, adult.CNhs10465.25-2G22.56
spleen, embryo E16.CNhs11035.461-43C12.06
spleen, embryo E18.CNhs11011.1271-21F23.52
spleen, neonate N10.CNhs11116.752-24D13.01
spleen, neonate N20.CNhs11112.824-19H13.83
spleen, neonate N25.CNhs11099.1354-25G34.35
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.15
stomach, adult.CNhs10503.33-1H67.64
stomach, embryo E12.CNhs10588.356-43E33.16
stomach, embryo E15.CNhs10603.1252-16G83.46
stomach, embryo E16.CNhs11022.459-17D43.02
stomach, embryo E17.CNhs11006.1035-18D54.18
stomach, embryo E18.CNhs10999.1286-20C64.37
stomach, neonate N03.CNhs11193.1340-24B83.64
stomach, neonate N07.CNhs11210.718-18A94.79
stomach, neonate N25.CNhs11104.1355-25E44.45
stomach, neonate N30.CNhs11134.1386-42I17.00
submandibular gland, adult.CNhs10469.59-29C16.21
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F52.54
testis, embryo E15.CNhs11034.443-27C52.32
testis, embryo E16.CNhs11033.470-26G55.25
testis, embryo E17.CNhs11029.486-18I52.20
testis, embryo E18.CNhs11027.503-18G53.38
testis, neonate N00.CNhs11189.1300-22B73.17
testis, neonate N07.CNhs11222.726-26I43.91
testis, neonate N10.CNhs11204.763-44D93.15
testis, neonate N20.CNhs11110.839-18H33.38
testis, neonate N30.CNhs11130.1391-42E24.32
thymus, adult.CNhs10471.38-12B52.21
thymus, embryo E14.CNhs11041.402-44I42.84
thymus, embryo E15.CNhs11005.430-45I22.77
thymus, embryo E16.CNhs11002.456-26C54.03
thymus, embryo E17.CNhs10581.478-18C13.58
thymus, embryo E18.CNhs10595.1273-19G43.18
thymus, neonate N02.CNhs11181.1541-43F82.52
thymus, neonate N03.CNhs11137.2104-43C72.81
thymus, neonate N06.CNhs11197.681-26C43.03
thymus, neonate N07.CNhs11211.713-19D33.28
thymus, neonate N10.CNhs11194.748-24E42.42
thymus, neonate N20.CNhs11186.820-7A22.83
thymus, neonate N25.CNhs11125.1362-25G72.79
thymus, neonate N30.CNhs11132.1393-42G23.97
tongue, adult.CNhs10499.32-1B45.89
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.99
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.51
urinary bladder, adult.CNhs10481.879-12E44.64
uterus, adult pregnant day19.CNhs10497.590-15F54.69
uterus, adult.CNhs10509.92-27E54.03
vagina, adult.CNhs10502.89-27D53.86
vesicular gland, adult.CNhs10491.51-27F85.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.44
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.08
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A65.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.18
whole body, embryo E11.CNhs11014.324-5I84.77
whole body, embryo E12.CNhs10587.857-27C97.98
whole body, embryo E13.CNhs10512.372-23H25.29
whole body, embryo E14.5.CNhs10578.420-27D23.89
whole body, embryo E14.CNhs10519.395-14B13.35
whole body, embryo E16.CNhs10514.453-14F24.23
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.03
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.32
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.01
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.71
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.61
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.52
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.23
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.75
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.39
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.63
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.73
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.96
whole body, embryo E17.5.CNhs10513.490-9F93.28
whole body, embryo E17.CNhs10517.475-3I58.74
whole body, embryo E18.CNhs10516.493-3B34.68
whole body, neonate N00.CNhs10525.657-19C26.66
whole body, neonate N01.CNhs10576.659-23C65.36
whole body, neonate N06.CNhs10515.692-21D15.74
whole body, neonate N10.CNhs10518.761-6B43.48





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.20e-1023
neuroblast (sensu Vertebrata)3.20e-1023

Uber anatomy
Ontology termp-valuen
gray matter1.43e-1034
neural tube2.13e-0952
neural rod2.13e-0952
future spinal cord2.13e-0952
neural keel2.13e-0952
regional part of nervous system3.66e-0954
ectoderm-derived structure6.86e-0995
ectoderm6.86e-0995
presumptive ectoderm6.86e-0995
central nervous system1.20e-0873
neurectoderm1.37e-0864
neural plate1.37e-0864
presumptive neural plate1.37e-0864
ecto-epithelium1.92e-0873
nervous system2.68e-0875
brain grey matter9.92e-0829
regional part of telencephalon9.92e-0829
telencephalon9.92e-0829
brain3.82e-0747
future brain3.82e-0747
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