FFCP PHASE1:Mm9::chr3:153515447..153515449,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=72317 | |EntrezGene=72317 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=15 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-59bp_to_ENSMUST00000156292,NR_040373_5end | |association_with_transcript=-59bp_to_ENSMUST00000156292,NR_040373_5end | ||
|cluster_id=chr3:153515447..153515449,- | |||
|description=CAGE_peak_3_at_2510003D18Rik_5end | |description=CAGE_peak_3_at_2510003D18Rik_5end | ||
|id=chr3:153515447..153515449,- | |id=chr3:153515447..153515449,- | ||
|ontology_enrichment_celltype=CL:0002027!5.06e-09!3;CL:0002006!5.06e-09!3;CL:0002024!5.06e-09!3;CL:0000553!3.37e-07!6;CL:0000556!3.37e-07!6 | |ontology_enrichment_celltype=CL:0002027!5.06e-09!3;CL:0002006!5.06e-09!3;CL:0002024!5.06e-09!3;CL:0000553!3.37e-07!6;CL:0000556!3.37e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002027,8.97e-44,3;CL:0002006,8.97e-44,3;CL:0002024,8.97e-44,3;CL:0000553,2.23e-22,6;CL:0000556,2.23e-22,6;CL:0000050,3.30e-15,9;CL:0000839,9.05e-11,13;CL:0000763,6.93e-09,16;CL:0000049,1.37e-07,19 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!4.53e-11!6;UBERON:0004457!4.53e-11!6;UBERON:0000042!4.53e-11!6;UBERON:0004854!4.53e-11!6;UBERON:0009034!4.53e-11!6;UBERON:0002095!4.53e-11!6;UBERON:0004782!4.53e-11!6;UBERON:0003281!4.53e-11!6;UBERON:0009664!4.53e-11!6;UBERON:0002296!4.53e-11!6;UBERON:0005602!4.53e-11!6;UBERON:0001179!4.53e-11!6;UBERON:0006293!4.53e-11!6;UBERON:0005172!1.10e-09!49;UBERON:0005173!1.10e-09!49;UBERON:0002417!1.10e-09!49;UBERON:0000916!1.10e-09!49;UBERON:0003887!4.47e-09!10;UBERON:0009569!3.02e-07!66;UBERON:0002405!6.99e-07!70 | |ontology_enrichment_uberon=UBERON:0002106!4.53e-11!6;UBERON:0004457!4.53e-11!6;UBERON:0000042!4.53e-11!6;UBERON:0004854!4.53e-11!6;UBERON:0009034!4.53e-11!6;UBERON:0002095!4.53e-11!6;UBERON:0004782!4.53e-11!6;UBERON:0003281!4.53e-11!6;UBERON:0009664!4.53e-11!6;UBERON:0002296!4.53e-11!6;UBERON:0005602!4.53e-11!6;UBERON:0001179!4.53e-11!6;UBERON:0006293!4.53e-11!6;UBERON:0005172!1.10e-09!49;UBERON:0005173!1.10e-09!49;UBERON:0002417!1.10e-09!49;UBERON:0000916!1.10e-09!49;UBERON:0003887!4.47e-09!10;UBERON:0009569!3.02e-07!66;UBERON:0002405!6.99e-07!70 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.35e-22,6;UBERON:0004457,1.35e-22,6;UBERON:0000042,1.35e-22,6;UBERON:0004854,1.35e-22,6;UBERON:0009034,1.35e-22,6;UBERON:0002095,1.35e-22,6;UBERON:0004782,1.35e-22,6;UBERON:0003281,1.35e-22,6;UBERON:0009664,1.35e-22,6;UBERON:0002296,1.35e-22,6;UBERON:0005602,1.35e-22,6;UBERON:0001179,1.35e-22,6;UBERON:0006293,1.35e-22,6;UBERON:0003887,6.72e-14,10;UBERON:0002390,4.78e-12,45;UBERON:0003061,4.78e-12,45;UBERON:0002193,2.55e-11,48;UBERON:0002405,2.55e-11,48;UBERON:0000945,5.75e-09,16;UBERON:0010039,5.75e-09,16;UBERON:0002371,6.93e-09,16;UBERON:0002075,1.17e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33243904726265,2.22722794128809,1.39912375625629,0.157731082679119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884610551949874,0.161766849947409,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.746441823660558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0.147610147979602,0,0,0,0.500535317148282,0.589676985339609,0.449724224769707,0.608580364165509,0.964708639009667,0.763877555344259,0.575392274901621,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854354403989263,0.206386867963223,0,1.50694765603753,1.77702496037333,1.60144721244566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0.44449345560323,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0.192906610981141,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33243904726265,2.22722794128809,1.39912375625629,0.157731082679119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884610551949874,0.161766849947409,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.746441823660558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0.147610147979602,0,0,0,0.500535317148282,0.589676985339609,0.449724224769707,0.608580364165509,0.964708639009667,0.763877555344259,0.575392274901621,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854354403989263,0.206386867963223,0,1.50694765603753,1.77702496037333,1.60144721244566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0.44449345560323,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p3@2510003D18Rik | |short_description=p3@2510003D18Rik | ||
}} | }} |
Latest revision as of 20:07, 1 October 2015
Short description: | p3@2510003D18Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_2510003D18Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:15 |
Association with transcript: | -59bp_to_ENSMUST00000156292, NR_040373_5end |
EntrezGene: | 2510003D18Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD9-positive, CD41-positive megakaryocyte cell | 8.97e-44 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 8.97e-44 | 3 |
Kit-positive megakaryocyte progenitor cell | 8.97e-44 | 3 |
megakaryocyte progenitor cell | 2.23e-22 | 6 |
megakaryocyte | 2.23e-22 | 6 |
megakaryocyte-erythroid progenitor cell | 3.30e-15 | 9 |
myeloid lineage restricted progenitor cell | 9.05e-11 | 13 |
myeloid cell | 6.93e-09 | 16 |
common myeloid progenitor | 1.37e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.35e-22 | 6 |
cavity lining | 1.35e-22 | 6 |
serous membrane | 1.35e-22 | 6 |
gastrointestinal system mesentery | 1.35e-22 | 6 |
stomach region | 1.35e-22 | 6 |
mesentery | 1.35e-22 | 6 |
gastrointestinal system serosa | 1.35e-22 | 6 |
mesentery of stomach | 1.35e-22 | 6 |
gut mesentery | 1.35e-22 | 6 |
dorsal mesentery | 1.35e-22 | 6 |
dorsal mesogastrium | 1.35e-22 | 6 |
peritoneal cavity | 1.35e-22 | 6 |
spleen primordium | 1.35e-22 | 6 |
intraembryonic coelom | 6.72e-14 | 10 |
hematopoietic system | 4.78e-12 | 45 |
blood island | 4.78e-12 | 45 |
hemolymphoid system | 2.55e-11 | 48 |
immune system | 2.55e-11 | 48 |
stomach | 5.75e-09 | 16 |
food storage organ | 5.75e-09 | 16 |
bone marrow | 6.93e-09 | 16 |
viscus | 1.17e-07 | 19 |