FFCP PHASE1:Hg19::chr13:31727956..31727972,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:31727956..31727972,- | |||
|description=CAGE_peak_at_chr13:31727956..31727972,- | |description=CAGE_peak_at_chr13:31727956..31727972,- | ||
|id=chr13:31727956..31727972,- | |id=chr13:31727956..31727972,- | ||
|ontology_enrichment_celltype=CL:0002031!1.33e-10!124;CL:0002087!3.50e-10!119;CL:0000738!8.14e-10!140;CL:0002032!1.12e-08!165;CL:0000837!1.12e-08!165;CL:0000037!2.70e-08!172;CL:0000566!2.70e-08!172;CL:0000988!1.38e-07!182;CL:0000542!7.03e-07!53;CL:0000051!7.03e-07!53 | |ontology_enrichment_celltype=CL:0002031!1.33e-10!124;CL:0002087!3.50e-10!119;CL:0000738!8.14e-10!140;CL:0002032!1.12e-08!165;CL:0000837!1.12e-08!165;CL:0000037!2.70e-08!172;CL:0000566!2.70e-08!172;CL:0000988!1.38e-07!182;CL:0000542!7.03e-07!53;CL:0000051!7.03e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0000624;4.34e-15;6!CL:0000791;2.42e-14;18!CL:0000789;2.42e-14;18!CL:0002419;2.42e-14;18!CL:0000097;9.59e-11;5!CL:0000084;4.43e-10;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,5.05e-15,6;CL:0000791,2.56e-14,18;CL:0000789,2.56e-14,18;CL:0002420,2.56e-14,18;CL:0002419,2.56e-14,18;CL:0000790,2.56e-14,18;CL:0002031,2.25e-12,120;CL:0000097,8.29e-11,5;CL:0002028,8.29e-11,5;CL:0000738,1.84e-10,136;CL:0000084,4.60e-10,25;CL:0000827,4.60e-10,25;CL:0002032,2.22e-09,161;CL:0000837,2.22e-09,161;CL:0000838,6.40e-09,52;CL:0000037,8.07e-09,168;CL:0002087,9.24e-09,115;CL:0000542,1.02e-08,53;CL:0000051,1.02e-08,53;CL:0000988,3.64e-08,177 | |||
|ontology_enrichment_development_v019=CL:0000790;2.42e-14;18!UBERON:0005062;7.47e-07;4!UBERON:0007284;7.47e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002133;6.79e-13;2!UBERON:0003978;7.05e-09;3!UBERON:0000946;7.05e-09;3!UBERON:0000996;2.09e-07;1!UBERON:0002134;2.22e-07;1!UBERON:0005208;2.22e-07;1!UBERON:0004145;2.22e-07;1!UBERON:0005946;2.22e-07;1!UBERON:0005965;2.22e-07;1!UBERON:0002078;2.22e-07;1!UBERON:0002135;3.46e-07;1!UBERON:0002038;8.23e-07;1!UBERON:0009661;8.23e-07;1!UBERON:0002950;8.23e-07;1!UBERON:0001891;8.23e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002133,7.44e-13,2;UBERON:0003978,7.49e-09,3;UBERON:0009751,7.49e-09,3;UBERON:0000946,7.49e-09,3;UBERON:0002523,7.49e-09,3;UBERON:0005983,7.49e-09,3;UBERON:0002165,7.49e-09,3;UBERON:0002062,7.49e-09,3;UBERON:0007280,7.49e-09,3;UBERON:0000996,2.09e-07,1;UBERON:0002134,2.22e-07,1;UBERON:0005208,2.22e-07,1;UBERON:0005946,2.22e-07,1;UBERON:0005965,2.22e-07,1;UBERON:0002078,2.22e-07,1;UBERON:0002135,3.78e-07,1;UBERON:0002038,4.78e-07,1;UBERON:0009661,4.78e-07,1;UBERON:0002950,4.78e-07,1;UBERON:0001891,4.78e-07,1;UBERON:0009616,4.78e-07,1;UBERON:0010286,4.78e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0.286235987131057,0,0.125542639594803,0.152826811495903,0.0821005894499457,0.0787107813136792,0,0,0.309632246632152,0,0,0,0.309868802321207,0.426507697462265,0,1.10799081706375,0.601633342410425,0,0,0,0,0.145398238779565,0,0,0.697287110717054,0,0.309706370895104,0.863077176966451,0,0.709446689665756,2.41321976515633,1.29096936716765,1.35426486594342,0,0.272906150057846,0,0.918251677112708,0.320929027076094,0.639337125799041,0,0.199463657621632,0,0,0,0,1.00499466102697,1.0429658368404,0.217188844705117,0,0.368277635987565,0.632924774881769,0.211255286311942,0,0,0.112328631146495,0.150176892841506,0,0.285012743741249,0.19891667719909,0,0,0,0,0.853460445133014,0,1.14950487990897,0,0,0,1.76171156811282,0.764546456250458,0,0.560508562981536,0,1.7703879310245,2.35806457649499,1.02800749499755,0,1.30368906653436,0.473447805734733,0,0,0,0.221533894583621,0.270803863765016,0.384273959177026,0.130059347559878,0.164437904603676,0,0.289803085735052,0.444859689486181,0.802622484269139,0,0,0.383220493601921,0.34362744548263,0,0,0,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,1.61285394579786,2.13952156626806,1.30341963494519,0,0,0,0.361439152384566,0,0,0,0,0,0.221729397462564,0,0.130979075497713,0,0,0,0.174129737299267,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0.367663080345869,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0.570471821544449,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0,0.103052529238439,0.257640540045629,0,0.168776332241266,0.194874010322397,0,0,0,0,0.10075209822764,0.169560592310488,0,0,0,0.243947412259191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0.790204397959275,0,0.246217006087397,0,0,0,0,0,0,0,0,1.47798971368783,0.264145302039678,1.4512968087854,0.432359860250884,4.92345490362882,0.063497894292169,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0,0.336255431980582,0.788123040807709,1.94064817373566,0.641715181398742,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0.215714200818617,0.213455115606889,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,0,0,0,0,0,0.120859449591622,0,0,0,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,4.53380451249978,0,0.247528499761764,0,0,0,0.096670718292122,0,0,0.275673144969061,0,0,0.0852266274161009,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,3.95403963262472,0,0,0,0.229723400206959,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0.929015875628594,0,0.0711418433484141,0.159426272728822,0.399158742865633,0,0.423347165447766,0,0,0,0.313359791546046,2.50634477090067,0,0,0,0.425846237690326,0,0,0,0.166849141711909,0,0.278406173895242,0,0.270455678475983,0,0,0.18714054040822,0,0.121360521749513,0.111443384277478,0.284136146806413,0.47748896947538,0,0.307160702099232,0,0.844016498463076,0,0,1.05562704063997,0.398495976502139,0,0.251932747854276,0.102268682502155,0.615424027305347,0,0.0898683511473268,0,0.511572370226872,0.197286811273867,0,0,0,0,0,0,0,0.724999575434793,0.1137934482855,0,0,0,0,0,0,0.723578631752448,0,0.110579259931225,0,0.219385397153973,0,0,0.230850775511391,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.889563386041866,0,0,0.202203398942031,0,0,0.182454789215666,0,0.485560759068186,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0.435296032902013,0,0,0,0.0730893170861856,0.246346371159628,0.290967049465258,0,0,0,0,0.189932387867636,0,0,0.213452994739353,0.19980960958213,0,0,0.686379991447858,0,0.745515213392595,0.235694034616795,0,0,0.611989305817931,0.288950589901519,0,1.09524303113594,0,0,0,2.23425921017803,0,7.89660327034495,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,1.0896272488926,0,0.275078873194468,0,0,0,0.0607495566580247,0,0,0.314727528809989,0,0,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0,0,0.146552233678082,5.30027555648885,0.517131825446202,0.52893040697076,0.171086837884329,0,0.320362237703084,0.314408610199332,0.414239055347196,0,0,0,0,2.72008901684737,1.5041393641362,0,0.983617892129413,0,0,0.488105059607853,0.500763722825999,0.573409195690071,1.44207766997908,0.0620964029413835,0.415045904808692,0.124980407962107,0,0.570930667089935,0,0,0.144921028610825,0.149254802886874,0,0,0.757612021100357,0.251567901752575,0,0.457680136793847,0,0.15543720058278,0,0.477890301491107,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0.276516872303462,0.389720617678777,0,0,0.655219697692825,0,0,0,0,0,0,0,0,0,0.383683113910955,0,0.314531883711793,0,0,0.212574920101683,0.867550349813015,0,0.318004350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| ||
|short_description=p@chr13:31727956..31727972,- | |short_description=p@chr13:31727956..31727972,- | ||
}} | }} |
Latest revision as of 15:36, 24 July 2015
Short description: | p@chr13:31727956..31727972, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:31727956..31727972, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 5.05e-15 | 6 |
mature alpha-beta T cell | 2.56e-14 | 18 |
alpha-beta T cell | 2.56e-14 | 18 |
immature T cell | 2.56e-14 | 18 |
mature T cell | 2.56e-14 | 18 |
immature alpha-beta T cell | 2.56e-14 | 18 |
hematopoietic lineage restricted progenitor cell | 2.25e-12 | 120 |
mast cell | 8.29e-11 | 5 |
basophil mast progenitor cell | 8.29e-11 | 5 |
leukocyte | 1.84e-10 | 136 |
T cell | 4.60e-10 | 25 |
pro-T cell | 4.60e-10 | 25 |
hematopoietic oligopotent progenitor cell | 2.22e-09 | 161 |
hematopoietic multipotent progenitor cell | 2.22e-09 | 161 |
lymphoid lineage restricted progenitor cell | 6.40e-09 | 52 |
hematopoietic stem cell | 8.07e-09 | 168 |
nongranular leukocyte | 9.24e-09 | 115 |
lymphocyte | 1.02e-08 | 53 |
common lymphoid progenitor | 1.02e-08 | 53 |
hematopoietic cell | 3.64e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
atrioventricular valve | 7.44e-13 | 2 |
valve | 7.49e-09 | 3 |
cardiac mesenchyme | 7.49e-09 | 3 |
cardial valve | 7.49e-09 | 3 |
tunica intima | 7.49e-09 | 3 |
heart layer | 7.49e-09 | 3 |
endocardium | 7.49e-09 | 3 |
endocardial cushion | 7.49e-09 | 3 |
presumptive endocardium | 7.49e-09 | 3 |
vagina | 2.09e-07 | 1 |
tricuspid valve | 2.22e-07 | 1 |
right atrium valve | 2.22e-07 | 1 |
outflow tract of atrium | 2.22e-07 | 1 |
outflow part of right atrium | 2.22e-07 | 1 |
right cardiac atrium | 2.22e-07 | 1 |
mitral valve | 3.78e-07 | 1 |
substantia nigra | 4.78e-07 | 1 |
midbrain nucleus | 4.78e-07 | 1 |
regional part of midbrain | 4.78e-07 | 1 |
midbrain | 4.78e-07 | 1 |
presumptive midbrain | 4.78e-07 | 1 |
midbrain neural tube | 4.78e-07 | 1 |