FFCP PHASE1:Hg19::chr10:104541994..104541998,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:104541994..104541998,+ | |||
|description=CAGE_peak_at_chr10:104541994..104541998,+ | |description=CAGE_peak_at_chr10:104541994..104541998,+ | ||
|id=chr10:104541994..104541998,+ | |id=chr10:104541994..104541998,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.56e-08!42;CL:0000860!1.66e-08!45;CL:0002031!6.69e-08!124;CL:0000839!9.17e-08!70;CL:0002087!3.04e-07!119;CL:0000557!5.04e-07!71;CL:0002194!7.49e-07!63;CL:0000576!7.49e-07!63;CL:0000040!7.49e-07!63;CL:0000559!7.49e-07!63 | |ontology_enrichment_celltype=CL:0002057!1.56e-08!42;CL:0000860!1.66e-08!45;CL:0002031!6.69e-08!124;CL:0000839!9.17e-08!70;CL:0002087!3.04e-07!119;CL:0000557!5.04e-07!71;CL:0002194!7.49e-07!63;CL:0000576!7.49e-07!63;CL:0000040!7.49e-07!63;CL:0000559!7.49e-07!63 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.05e-08;3!UBERON:0003057;1.05e-08;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.21e-24!115;UBERON:0001049!4.76e-10!57;UBERON:0005068!4.76e-10!57;UBERON:0006241!4.76e-10!57;UBERON:0007135!4.76e-10!57;UBERON:0002390!1.88e-08!102;UBERON:0003061!1.88e-08!102;UBERON:0002193!2.07e-08!112;UBERON:0003080!8.65e-08!42;UBERON:0002780!1.78e-07!41;UBERON:0001890!1.78e-07!41;UBERON:0006240!1.78e-07!41;UBERON:0002616!1.85e-07!59 | |ontology_enrichment_uberon=UBERON:0007023!3.21e-24!115;UBERON:0001049!4.76e-10!57;UBERON:0005068!4.76e-10!57;UBERON:0006241!4.76e-10!57;UBERON:0007135!4.76e-10!57;UBERON:0002390!1.88e-08!102;UBERON:0003061!1.88e-08!102;UBERON:0002193!2.07e-08!112;UBERON:0003080!8.65e-08!42;UBERON:0002780!1.78e-07!41;UBERON:0001890!1.78e-07!41;UBERON:0006240!1.78e-07!41;UBERON:0002616!1.85e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0002240;1.05e-08;3!UBERON:0005174;1.05e-08;3!UBERON:0001137;1.05e-08;3!UBERON:0001896;2.72e-08;3!UBERON:0005290;2.72e-08;3!UBERON:0005090;4.05e-07;2!UBERON:0001630;4.05e-07;2!UBERON:0002298;5.32e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.25e-18,114;UBERON:0002240,5.62e-09,3;UBERON:0005174,5.62e-09,3;UBERON:0001137,5.62e-09,3;UBERON:0001896,3.32e-08,3;UBERON:0005290,3.32e-08,3;UBERON:0010096,3.32e-08,3;UBERON:0003076,1.60e-07,15;UBERON:0003057,1.60e-07,15;UBERON:0005090,4.24e-07,2;UBERON:0001630,4.24e-07,2;UBERON:0005904,5.01e-07,4;UBERON:0002298,9.71e-07,6 | |||
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|short_description=p@chr10:104541994..104541998,+ | |short_description=p@chr10:104541994..104541998,+ | ||
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Latest revision as of 09:53, 23 July 2015
Short description: | p@chr10:104541994..104541998, + |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:104541994..104541998, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 8.25e-18 | 114 |
spinal cord | 5.62e-09 | 3 |
dorsal region element | 5.62e-09 | 3 |
dorsum | 5.62e-09 | 3 |
medulla oblongata | 3.32e-08 | 3 |
myelencephalon | 3.32e-08 | 3 |
future myelencephalon | 3.32e-08 | 3 |
posterior neural tube | 1.60e-07 | 15 |
chordal neural plate | 1.60e-07 | 15 |
muscle structure | 4.24e-07 | 2 |
muscle organ | 4.24e-07 | 2 |
duct of male reproductive system | 5.01e-07 | 4 |
brainstem | 9.71e-07 | 6 |