FFCP PHASE1:Hg19::chr10:104913346..104913363,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22978 | |EntrezGene=22978 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8022 | |HGNC=8022 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z382 | |UniProt=B7Z382 | ||
|association_with_transcript=20bp_to_ENST00000423468,uc010qqp.1_5end | |association_with_transcript=20bp_to_ENST00000423468,uc010qqp.1_5end | ||
|cluster_id=chr10:104913346..104913363,- | |||
|description=CAGE_peak_5_at_NT5C2_5end | |description=CAGE_peak_5_at_NT5C2_5end | ||
|id=chr10:104913346..104913363,- | |id=chr10:104913346..104913363,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.03e-15;12!CL:0002549;4.17e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,6.03e-16,12;CL:0002549,4.69e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0009497;4.94e-32;13!UBERON:0004161;1.91e-26;11!UBERON:0001041;1.69e-18;30!UBERON:0000358;2.46e-13;1!UBERON:0003104;4.82e-09;31 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3371;1.61e-13;1!DOID:4549;1.61e-13;1!DOID:5861;1.61e-13;1!DOID:6496;1.61e-13;1!DOID:7;5.33e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.61e-13,1;DOID:4549,1.61e-13,1;DOID:5861,1.61e-13,1;DOID:6496,1.61e-13,1;DOID:7,1.66e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.53e-23!115;UBERON:0001049!2.04e-12!57;UBERON:0005068!2.04e-12!57;UBERON:0006241!2.04e-12!57;UBERON:0007135!2.04e-12!57;UBERON:0001017!5.24e-12!82;UBERON:0003075!7.53e-12!86;UBERON:0007284!7.53e-12!86;UBERON:0005743!7.70e-12!86;UBERON:0002616!9.42e-12!59;UBERON:0002346!1.51e-11!90;UBERON:0000955!4.82e-10!69;UBERON:0006238!4.82e-10!69;UBERON:0000073!1.25e-09!94;UBERON:0001016!1.25e-09!94;UBERON:0002780!4.86e-09!41;UBERON:0001890!4.86e-09!41;UBERON:0006240!4.86e-09!41;UBERON:0003080!1.13e-08!42;UBERON:0000481!1.54e-08!347;UBERON:0004921!5.59e-08!129;UBERON:0004185!5.59e-08!129;UBERON:0000062!7.44e-08!511;UBERON:0002020!8.07e-08!34;UBERON:0003528!8.07e-08!34;UBERON:0001893!1.04e-07!34;UBERON:0000119!1.14e-07!312;UBERON:0000477!1.16e-07!286;UBERON:0002791!2.98e-07!33;UBERON:0000475!6.78e-07!365;UBERON:0000483!8.53e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;1.52e-16;25!UBERON:0002107;2.53e-15;19!UBERON:0006925;2.53e-15;19!UBERON:0005795;6.05e-13;1!UBERON:0002368;2.37e-11;33!UBERON:0002365;1.02e-08;31!UBERON:0002330;1.02e-08;31!UBERON:0005629;4.17e-07;2!UBERON:0005358;4.17e-07;2!UBERON:0001886;4.17e-07;2!UBERON:0004086;4.17e-07;2!UBERON:0005282;4.17e-07;2!UBERON:0005281;4.17e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008835,4.75e-19,22;UBERON:0003894,4.75e-19,22;UBERON:0009854,3.29e-18,23;UBERON:0007499,9.94e-17,25;UBERON:0009497,9.94e-17,25;UBERON:0000015,9.94e-17,25;UBERON:0002423,9.94e-17,25;UBERON:0006235,9.94e-17,25;UBERON:0004161,9.94e-17,25;UBERON:0009856,4.49e-16,26;UBERON:0002107,1.65e-15,19;UBERON:0006925,1.65e-15,19;UBERON:0008836,1.65e-15,19;UBERON:0002368,9.55e-12,35;UBERON:0003929,4.35e-10,54;UBERON:0002365,1.76e-09,31;UBERON:0002330,1.76e-09,31;UBERON:0000949,4.69e-09,45;UBERON:0005911,2.68e-08,82;UBERON:0005629,4.69e-07,2;UBERON:0005358,4.69e-07,2;UBERON:0001886,4.69e-07,2;UBERON:0004086,4.69e-07,2;UBERON:0005282,4.69e-07,2;UBERON:0005281,4.69e-07,2;UBERON:0002530,8.21e-07,59 | |||
|phase1_expression=0,0,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0,0,0,0.0945348171640679,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0.933633106199299,0,0,0.605429710579726,1.15235184896,0,0,0,0,0.117434498643765,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,0.427114777637135,0,0.300091096084402,0.412210116953756,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.530119073285941,0.232387885739037,0.310983165046111,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0.134831308160164,0.392442930250692,0,0,0,0,0,0,0,0.590789906681404,0,0.368965315629341,0.171567810298526,0,0,0,0,0,0,0,0.579652024875384,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0.87192013766656,0.1466765716419,0.129271715757778,0,0,0,0,0,0,0,0.57191197463259,0,0,0,0.710783897485092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.36807447515742,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0.35142424497814,0.601892199455438,0,0,0,0,0.173767228936166,0.391602314925481,0.686286847621712,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0.0821271560138091,0,0,0.966875596732978,0,0,0.229628896329213,0,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0.429680979473094,0.290033387828457,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539617372749944,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0.409499734223957,0,0,0,0,0.438450885253763,0.578775534266688,0,0,0,0,0,0.196498082026242,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,2.68531762013414,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0,0.472775363535873,0,0,0,0,0.60298219312704,0,0.774054819518572,0,0.219385397153973,0.10893846351899,0,0.769502585037971,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0.296521128680622,0,0,0.269604531922708,0,0.234264445725339,0,0,0.242780379534093,0.394584402849391,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0.694238953340524,0,0,0.34945333648406,0,0.19351266257817,0.365446585430928,0.492692742319255,0,7.85479527554352,1.35588444468319,0,0,0.316553979779393,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0.223171457441873,0,0.360299883542404,0,1.57566364614447,1.40106959247983,1.68508859635462,1.57483970423598,0,0,0.408610218334727,0.160753148465019,0.137539436597234,0,0,0,0.182248669974074,0,0.157611414598396,0.524545881349981,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,5.30027555648885,0.129282956361551,0.52893040697076,1.02652102730598,0,0.106787412567695,0.314408610199332,0.828478110694391,0.496166021811951,0,0,0,0,0.2506898940227,0,0,0,0,0.244052529803926,0.1251909307065,1.14681839138014,0.332787154610557,0.248385611765534,2.35192679391592,0,0.303298235083296,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0.3062454773532,0.128458450192919,0,0.159633859057151,0.41023272848151,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,2.25630985047772,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.253663240775627,0,0,0.496211178389294,0,0,0,0.336283722218824,0,0.227662191351298,0.266107110487916,0,0,0.271878931907327,0.263091094251396,0,0.111231401892069,0.627944742804112,0.157115589916002,0,0,0,0,0.78624198594322,0,0,1.21700790611806,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307988420568741,0,0.485710993059139,0,0,0,0,0,0,0,0.655678681511872,0,0,0,0.785233868459781,0,0.4226557275834,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0.475940431336403,0.436350690340377,0,0,0,0,0,0,0.253397002022874,0,0,0,0,0.151557396436479,0.267964130156178,0,0.517164979309476,0.639701945702943,0.714193294391221,0,0,0.112131862580613,1.14564884900697,0.808468755832877,0,0,0.134704106029175,0.0717222053926763,0.99798106963804,0,0.533636729388577,0,0.0898252021065869,2.34640942403454,0.366724332548599,1.22068853494722,0.665756774185513,0,0 | |phase1_expression=0,0,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0,0,0,0.0945348171640679,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0.933633106199299,0,0,0.605429710579726,1.15235184896,0,0,0,0,0.117434498643765,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,0.427114777637135,0,0.300091096084402,0.412210116953756,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.530119073285941,0.232387885739037,0.310983165046111,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0.134831308160164,0.392442930250692,0,0,0,0,0,0,0,0.590789906681404,0,0.368965315629341,0.171567810298526,0,0,0,0,0,0,0,0.579652024875384,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0.87192013766656,0.1466765716419,0.129271715757778,0,0,0,0,0,0,0,0.57191197463259,0,0,0,0.710783897485092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.36807447515742,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0.35142424497814,0.601892199455438,0,0,0,0,0.173767228936166,0.391602314925481,0.686286847621712,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0.0821271560138091,0,0,0.966875596732978,0,0,0.229628896329213,0,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0.429680979473094,0.290033387828457,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539617372749944,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0.409499734223957,0,0,0,0,0.438450885253763,0.578775534266688,0,0,0,0,0,0.196498082026242,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,2.68531762013414,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0,0.472775363535873,0,0,0,0,0.60298219312704,0,0.774054819518572,0,0.219385397153973,0.10893846351899,0,0.769502585037971,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0.296521128680622,0,0,0.269604531922708,0,0.234264445725339,0,0,0.242780379534093,0.394584402849391,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0.694238953340524,0,0,0.34945333648406,0,0.19351266257817,0.365446585430928,0.492692742319255,0,7.85479527554352,1.35588444468319,0,0,0.316553979779393,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0.223171457441873,0,0.360299883542404,0,1.57566364614447,1.40106959247983,1.68508859635462,1.57483970423598,0,0,0.408610218334727,0.160753148465019,0.137539436597234,0,0,0,0.182248669974074,0,0.157611414598396,0.524545881349981,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,5.30027555648885,0.129282956361551,0.52893040697076,1.02652102730598,0,0.106787412567695,0.314408610199332,0.828478110694391,0.496166021811951,0,0,0,0,0.2506898940227,0,0,0,0,0.244052529803926,0.1251909307065,1.14681839138014,0.332787154610557,0.248385611765534,2.35192679391592,0,0.303298235083296,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0.3062454773532,0.128458450192919,0,0.159633859057151,0.41023272848151,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,2.25630985047772,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.253663240775627,0,0,0.496211178389294,0,0,0,0.336283722218824,0,0.227662191351298,0.266107110487916,0,0,0.271878931907327,0.263091094251396,0,0.111231401892069,0.627944742804112,0.157115589916002,0,0,0,0,0.78624198594322,0,0,1.21700790611806,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307988420568741,0,0.485710993059139,0,0,0,0,0,0,0,0.655678681511872,0,0,0,0.785233868459781,0,0.4226557275834,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0.475940431336403,0.436350690340377,0,0,0,0,0,0,0.253397002022874,0,0,0,0,0.151557396436479,0.267964130156178,0,0.517164979309476,0.639701945702943,0.714193294391221,0,0,0.112131862580613,1.14564884900697,0.808468755832877,0,0,0.134704106029175,0.0717222053926763,0.99798106963804,0,0.533636729388577,0,0.0898252021065869,2.34640942403454,0.366724332548599,1.22068853494722,0.665756774185513,0,0 | ||
|short_description=p5@NT5C2 | |short_description=p5@NT5C2 | ||
}} | }} |
Latest revision as of 02:59, 16 September 2015
Short description: | p5@NT5C2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NT5C2_5end |
Coexpression cluster: | NA |
Association with transcript: | 20bp_to_ENST00000423468, uc010qqp.1_5end |
EntrezGene: | NT5C2 |
HGNC: | 8022 |
UniProt: | B7Z382 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 6.03e-16 | 12 |
fibroblast of choroid plexus | 4.69e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
hepatic diverticulum | 4.75e-19 | 22 |
liver primordium | 4.75e-19 | 22 |
digestive tract diverticulum | 3.29e-18 | 23 |
epithelial sac | 9.94e-17 | 25 |
epithelium of foregut-midgut junction | 9.94e-17 | 25 |
anatomical boundary | 9.94e-17 | 25 |
hepatobiliary system | 9.94e-17 | 25 |
foregut-midgut junction | 9.94e-17 | 25 |
septum transversum | 9.94e-17 | 25 |
sac | 4.49e-16 | 26 |
liver | 1.65e-15 | 19 |
digestive gland | 1.65e-15 | 19 |
liver bud | 1.65e-15 | 19 |
endocrine gland | 9.55e-12 | 35 |
gut epithelium | 4.35e-10 | 54 |
exocrine gland | 1.76e-09 | 31 |
exocrine system | 1.76e-09 | 31 |
endocrine system | 4.69e-09 | 45 |
endo-epithelium | 2.68e-08 | 82 |
vascular plexus | 4.69e-07 | 2 |
ventricle of nervous system | 4.69e-07 | 2 |
choroid plexus | 4.69e-07 | 2 |
brain ventricle | 4.69e-07 | 2 |
ventricular system of brain | 4.69e-07 | 2 |
ventricular system of central nervous system | 4.69e-07 | 2 |
gland | 8.21e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.61e-13 | 1 |
extraosseous chondrosarcoma | 1.61e-13 | 1 |
myxoid chondrosarcoma | 1.61e-13 | 1 |
extraskeletal myxoid chondrosarcoma | 1.61e-13 | 1 |
disease of anatomical entity | 1.66e-07 | 39 |