FFCP PHASE1:Mm9::chr4:59686875..59686885,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=15 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:59686875..59686885,+ | |||
|description=CAGE_peak_at_chr4:59686875..59686885,+ | |description=CAGE_peak_at_chr4:59686875..59686885,+ | ||
|id=chr4:59686875..59686885,+ | |id=chr4:59686875..59686885,+ | ||
|ontology_enrichment_celltype=CL:0000553!2.82e-14!6;CL:0000556!2.82e-14!6;CL:0002027!1.57e-11!3;CL:0002006!1.57e-11!3;CL:0002024!1.57e-11!3;CL:0000050!1.98e-09!9;CL:0000414!1.16e-07!11 | |ontology_enrichment_celltype=CL:0000553!2.82e-14!6;CL:0000556!2.82e-14!6;CL:0002027!1.57e-11!3;CL:0002006!1.57e-11!3;CL:0002024!1.57e-11!3;CL:0000050!1.98e-09!9;CL:0000414!1.16e-07!11 | ||
|ontology_enrichment_celltype_v019_2=CL:0002027,2.80e-37,3;CL:0002006,2.80e-37,3;CL:0002024,2.80e-37,3;CL:0000553,4.31e-19,6;CL:0000556,4.31e-19,6;CL:0000050,5.44e-13,9;CL:0000839,3.27e-09,13;CL:0000763,1.32e-07,16 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!6.85e-15!6;UBERON:0004457!6.85e-15!6;UBERON:0000042!6.85e-15!6;UBERON:0004854!6.85e-15!6;UBERON:0009034!6.85e-15!6;UBERON:0002095!6.85e-15!6;UBERON:0004782!6.85e-15!6;UBERON:0003281!6.85e-15!6;UBERON:0009664!6.85e-15!6;UBERON:0002296!6.85e-15!6;UBERON:0005602!6.85e-15!6;UBERON:0001179!6.85e-15!6;UBERON:0006293!6.85e-15!6;UBERON:0003887!2.02e-12!10;UBERON:0002405!8.64e-11!70;UBERON:0000945!9.62e-10!16;UBERON:0010039!9.62e-10!16;UBERON:0005172!2.65e-09!49;UBERON:0005173!2.65e-09!49;UBERON:0002417!2.65e-09!49;UBERON:0000916!2.65e-09!49;UBERON:0009569!2.16e-07!66;UBERON:0005057!2.19e-07!51;UBERON:0001474!9.32e-07!22;UBERON:0004765!9.32e-07!22;UBERON:0001434!9.32e-07!22 | |ontology_enrichment_uberon=UBERON:0002106!6.85e-15!6;UBERON:0004457!6.85e-15!6;UBERON:0000042!6.85e-15!6;UBERON:0004854!6.85e-15!6;UBERON:0009034!6.85e-15!6;UBERON:0002095!6.85e-15!6;UBERON:0004782!6.85e-15!6;UBERON:0003281!6.85e-15!6;UBERON:0009664!6.85e-15!6;UBERON:0002296!6.85e-15!6;UBERON:0005602!6.85e-15!6;UBERON:0001179!6.85e-15!6;UBERON:0006293!6.85e-15!6;UBERON:0003887!2.02e-12!10;UBERON:0002405!8.64e-11!70;UBERON:0000945!9.62e-10!16;UBERON:0010039!9.62e-10!16;UBERON:0005172!2.65e-09!49;UBERON:0005173!2.65e-09!49;UBERON:0002417!2.65e-09!49;UBERON:0000916!2.65e-09!49;UBERON:0009569!2.16e-07!66;UBERON:0005057!2.19e-07!51;UBERON:0001474!9.32e-07!22;UBERON:0004765!9.32e-07!22;UBERON:0001434!9.32e-07!22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,5.19e-34,6;UBERON:0004457,5.19e-34,6;UBERON:0000042,5.19e-34,6;UBERON:0004854,5.19e-34,6;UBERON:0009034,5.19e-34,6;UBERON:0002095,5.19e-34,6;UBERON:0004782,5.19e-34,6;UBERON:0003281,5.19e-34,6;UBERON:0009664,5.19e-34,6;UBERON:0002296,5.19e-34,6;UBERON:0005602,5.19e-34,6;UBERON:0001179,5.19e-34,6;UBERON:0006293,5.19e-34,6;UBERON:0003887,1.12e-20,10;UBERON:0002390,8.60e-14,45;UBERON:0003061,8.60e-14,45;UBERON:0000945,3.91e-13,16;UBERON:0010039,3.91e-13,16;UBERON:0002193,6.07e-13,48;UBERON:0002405,6.07e-13,48;UBERON:0002075,3.87e-11,19;UBERON:0004923,6.53e-09,24;UBERON:0002371,1.32e-07,16;UBERON:0004177,1.91e-07,29;UBERON:0005057,1.91e-07,29;UBERON:0003081,3.43e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33243904726265,2.63217847606774,2.09868563438444,0.157731082679119,0,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622034853050465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786235980452812,0,0.202860121388503,0.241177159752417,0.25462585178142,0,0.162135226775035,0.549122826376163,0,0,0.312037673114561,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.9048049735635,0,0.185194527369712,3.39063222608444,5.33107488111998,2.28778173206523,0,0,0,0,0,0,0,0,0.218362563746178,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419226325255965,0,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441182838239031,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33243904726265,2.63217847606774,2.09868563438444,0.157731082679119,0,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622034853050465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786235980452812,0,0.202860121388503,0.241177159752417,0.25462585178142,0,0.162135226775035,0.549122826376163,0,0,0.312037673114561,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.9048049735635,0,0.185194527369712,3.39063222608444,5.33107488111998,2.28778173206523,0,0,0,0,0,0,0,0,0.218362563746178,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419226325255965,0,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441182838239031,0 | ||
|short_description=p@chr4:59686875..59686885,+ | |short_description=p@chr4:59686875..59686885,+ | ||
}} | }} |
Latest revision as of 15:46, 5 August 2015
Short description: | p@chr4:59686875..59686885, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:59686875..59686885, + |
Coexpression cluster: | MCL_coexpression_mm9:15 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD9-positive, CD41-positive megakaryocyte cell | 2.80e-37 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 2.80e-37 | 3 |
Kit-positive megakaryocyte progenitor cell | 2.80e-37 | 3 |
megakaryocyte progenitor cell | 4.31e-19 | 6 |
megakaryocyte | 4.31e-19 | 6 |
megakaryocyte-erythroid progenitor cell | 5.44e-13 | 9 |
myeloid lineage restricted progenitor cell | 3.27e-09 | 13 |
myeloid cell | 1.32e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
spleen | 5.19e-34 | 6 |
cavity lining | 5.19e-34 | 6 |
serous membrane | 5.19e-34 | 6 |
gastrointestinal system mesentery | 5.19e-34 | 6 |
stomach region | 5.19e-34 | 6 |
mesentery | 5.19e-34 | 6 |
gastrointestinal system serosa | 5.19e-34 | 6 |
mesentery of stomach | 5.19e-34 | 6 |
gut mesentery | 5.19e-34 | 6 |
dorsal mesentery | 5.19e-34 | 6 |
dorsal mesogastrium | 5.19e-34 | 6 |
peritoneal cavity | 5.19e-34 | 6 |
spleen primordium | 5.19e-34 | 6 |
intraembryonic coelom | 1.12e-20 | 10 |
hematopoietic system | 8.60e-14 | 45 |
blood island | 8.60e-14 | 45 |
stomach | 3.91e-13 | 16 |
food storage organ | 3.91e-13 | 16 |
hemolymphoid system | 6.07e-13 | 48 |
immune system | 6.07e-13 | 48 |
viscus | 3.87e-11 | 19 |
organ component layer | 6.53e-09 | 24 |
bone marrow | 1.32e-07 | 16 |
hemopoietic organ | 1.91e-07 | 29 |
immune organ | 1.91e-07 | 29 |
lateral plate mesoderm | 3.43e-07 | 87 |