FFCP PHASE1:Hg19::chr10:70849885..70849905,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:70849885..70849905,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_at_chr10:70849885..70849905,- | |description=CAGE_peak_at_chr10:70849885..70849905,- | ||
|id=chr10:70849885..70849905,- | |id=chr10:70849885..70849905,- | ||
|ontology_enrichment_celltype=CL:0000738!1.70e-56!140;CL:0002057!1.16e-55!42;CL:0000860!5.53e-51!45;CL:0000766!1.63e-48!76;CL:0000037!3.92e-45!172;CL:0000566!3.92e-45!172;CL:0002087!6.61e-45!119;CL:0002031!4.81e-44!124;CL:0000988!2.94e-41!182;CL:0002032!4.95e-41!165;CL:0000837!4.95e-41!165;CL:0000839!4.77e-36!70;CL:0000557!2.48e-35!71;CL:0002194!2.46e-33!63;CL:0000576!2.46e-33!63;CL:0000040!2.46e-33!63;CL:0000559!2.46e-33!63;CL:0002009!6.71e-32!65;CL:0000763!8.89e-30!112;CL:0000049!8.89e-30!112;CL:0002393!3.29e-14!9;CL:0002397!3.29e-14!9;CL:0000791!4.62e-14!18;CL:0000789!4.62e-14!18;CL:0002420!4.62e-14!18;CL:0002419!4.62e-14!18;CL:0000790!4.62e-14!18;CL:0000094!1.19e-13!8;CL:0000084!1.28e-13!25;CL:0000827!1.28e-13!25;CL:0000134!1.69e-10!358;CL:0000838!2.05e-10!52;CL:0000542!4.28e-10!53;CL:0000051!4.28e-10!53;CL:0002320!6.89e-10!365;CL:0000081!2.19e-09!11;CL:0000624!3.06e-09!6;CL:0000625!5.30e-08!11;CL:0000219!8.68e-08!390 | |ontology_enrichment_celltype=CL:0000738!1.70e-56!140;CL:0002057!1.16e-55!42;CL:0000860!5.53e-51!45;CL:0000766!1.63e-48!76;CL:0000037!3.92e-45!172;CL:0000566!3.92e-45!172;CL:0002087!6.61e-45!119;CL:0002031!4.81e-44!124;CL:0000988!2.94e-41!182;CL:0002032!4.95e-41!165;CL:0000837!4.95e-41!165;CL:0000839!4.77e-36!70;CL:0000557!2.48e-35!71;CL:0002194!2.46e-33!63;CL:0000576!2.46e-33!63;CL:0000040!2.46e-33!63;CL:0000559!2.46e-33!63;CL:0002009!6.71e-32!65;CL:0000763!8.89e-30!112;CL:0000049!8.89e-30!112;CL:0002393!3.29e-14!9;CL:0002397!3.29e-14!9;CL:0000791!4.62e-14!18;CL:0000789!4.62e-14!18;CL:0002420!4.62e-14!18;CL:0002419!4.62e-14!18;CL:0000790!4.62e-14!18;CL:0000094!1.19e-13!8;CL:0000084!1.28e-13!25;CL:0000827!1.28e-13!25;CL:0000134!1.69e-10!358;CL:0000838!2.05e-10!52;CL:0000542!4.28e-10!53;CL:0000051!4.28e-10!53;CL:0002320!6.89e-10!365;CL:0000081!2.19e-09!11;CL:0000624!3.06e-09!6;CL:0000625!5.30e-08!11;CL:0000219!8.68e-08!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.61e-33;33!CL:0002057;1.61e-33;33!CL:0000576;3.05e-25;48!CL:0000766;8.36e-25;69!CL:0000473;2.68e-23;39!CL:0000234;2.68e-23;39!CL:0000094;1.58e-22;8!CL:0002393;2.00e-17;6!CL:0002397;2.00e-17;6!CL:0000081;5.72e-16;11!CL:0002087;9.12e-12;104!CL:0000763;4.89e-11;100!CL:0000623;6.31e-10;3!CL:0000775;2.92e-09;3!CL:0000767;4.03e-09;3!CL:0000738;4.34e-09;136!CL:0000226;1.36e-08;3!CL:0000898;1.36e-08;3!CL:0000842;1.36e-08;3!CL:0000771;1.42e-07;2!CL:0000624;2.15e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.97e-53,72;CL:0000860,2.03e-50,42;CL:0002057,2.03e-50,42;CL:0000738,2.79e-46,136;CL:0000473,4.52e-43,48;CL:0000234,4.52e-43,48;CL:0000839,1.13e-35,66;CL:0000557,5.12e-35,67;CL:0000037,5.70e-35,168;CL:0002194,8.40e-33,59;CL:0000576,8.40e-33,59;CL:0000040,8.40e-33,59;CL:0000559,8.40e-33,59;CL:0002087,1.34e-32,115;CL:0000988,1.59e-32,177;CL:0002032,3.06e-32,161;CL:0000837,3.06e-32,161;CL:0000763,3.80e-32,108;CL:0000049,3.80e-32,108;CL:0002009,1.77e-31,61;CL:0002031,4.42e-31,120;CL:0000094,1.57e-22,8;CL:0000081,5.69e-16,11;CL:0002393,3.01e-15,9;CL:0002397,3.01e-15,9;CL:0000134,1.84e-10,354;CL:0002320,5.15e-10,361;CL:0000623,7.11e-10,3;CL:0000825,7.11e-10,3;CL:0000775,1.96e-09,3;CL:0000767,5.89e-09,3;CL:0000898,1.42e-08,3;CL:0000219,1.89e-08,386;CL:0000226,2.01e-08,3;CL:0000842,2.01e-08,3;CL:0000771,1.42e-07,2;CL:0000624,2.57e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;1.05e-36;42!CL:0000049;2.10e-08;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.03e-43!102;UBERON:0003061!4.03e-43!102;UBERON:0002193!5.42e-39!112;UBERON:0002371!8.35e-33!80;UBERON:0001474!1.85e-29!86;UBERON:0004765!7.08e-23!101;UBERON:0001434!7.08e-23!101;UBERON:0002405!1.83e-22!115;UBERON:0003081!1.50e-14!216;UBERON:0000178!1.19e-12!15;UBERON:0000179!1.19e-12!15;UBERON:0000463!1.19e-12!15;UBERON:0002204!1.04e-10!167;UBERON:0002384!5.45e-10!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.86e-08;15!UBERON:0000179;5.86e-08;15!UBERON:0000463;5.86e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.18e-37,98;UBERON:0003061,1.18e-37,98;UBERON:0002193,3.49e-33,108;UBERON:0002371,6.58e-32,76;UBERON:0001474,6.14e-29,82;UBERON:0002405,3.62e-26,93;UBERON:0004765,1.36e-25,90;UBERON:0001434,3.61e-22,100;UBERON:0003081,1.22e-13,203;UBERON:0002384,5.06e-10,371;UBERON:0002204,6.15e-10,167;UBERON:0000178,5.57e-08,15;UBERON:0000179,5.57e-08,15;UBERON:0000463,5.57e-08,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.32700704533794,1.15148819429164,2.16742572642506,0,0,0,0,0,0.293600439334847,7.75593571944628,3.40925560699241,14.9737500793938,0,0,0,0.145398238779565,0,0.242584061187816,1.16214518452842,0.411167888021826,2.47765096716083,0.28769239232215,3.07392847834921,8.0403958162119,1.37898272294647,2.5819387343353,5.41705946377367,0.376484679085209,0.545812300115692,0.449446968890169,0.918251677112708,4.17207735198922,2.55734850319616,0.329851300186716,1.19678194572979,0.852449501065388,2.32167390902867,5.10646702222026,4.9825779919646,1.00499466102697,1.5644487552606,4.56096573880745,2.42159801053347,2.57794345191295,4.1140110367315,1.90129757680748,2.76385589954557,3.77385561915077,4.6054738770063,3.30389164251314,3.37523732063868,1.42506371870624,0.39783335439818,0.730656615058536,0,0,0,0,0,0,0,0,0.569212969109448,0,0.764546456250458,0,1.68152568894461,0.263384084775077,0.786839080455332,0.786021525498329,2.05601498999509,0.334372990781356,1.62961133316795,3.78758244587787,1.94826728407911,3.00808233589969,2.3568472597987,3.32300841875432,2.43723477388514,1.28091319725675,2.21100890851793,0.328875809207352,1.10540007114339,0,0.593146252648242,1.33770414044857,1.04535523804977,0.453237370790265,1.14966148080576,6.18529401868734,2.53019692019503,0.637130828648193,0.651083453856419,0.950452044448374,0.602300476311091,0,0,0.947109008176067,0,3.83052812126992,1.06976078313403,4.34473211648397,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.8136500923276,23.2668158488995,0,0,0,0,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.792435906119034,5.80518723514162,1.29707958075265,2.65109110195398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.10795356625974,2.37190332345469,10.6524720112191,0,0,0,0,0,1.49801404789436,2.99161459204025,9.94597232246485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,2.37285620900479,1.06727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,1.52927441428475,0.569647187174163,0.476463550915578,0.822724546172388,1.94541993357815,4.86028293514303,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0.425846237690326,0,0,0,0.333698283423817,0,0,0,0,0,0,0,0.146508179271894,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.123084805461069,0,0,0,0,0,2.3948309234694,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788662062837943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0,1.24271716604159,0.496166021811951,0,0.121792598380896,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.59996218756479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.32700704533794,1.15148819429164,2.16742572642506,0,0,0,0,0,0.293600439334847,7.75593571944628,3.40925560699241,14.9737500793938,0,0,0,0.145398238779565,0,0.242584061187816,1.16214518452842,0.411167888021826,2.47765096716083,0.28769239232215,3.07392847834921,8.0403958162119,1.37898272294647,2.5819387343353,5.41705946377367,0.376484679085209,0.545812300115692,0.449446968890169,0.918251677112708,4.17207735198922,2.55734850319616,0.329851300186716,1.19678194572979,0.852449501065388,2.32167390902867,5.10646702222026,4.9825779919646,1.00499466102697,1.5644487552606,4.56096573880745,2.42159801053347,2.57794345191295,4.1140110367315,1.90129757680748,2.76385589954557,3.77385561915077,4.6054738770063,3.30389164251314,3.37523732063868,1.42506371870624,0.39783335439818,0.730656615058536,0,0,0,0,0,0,0,0,0.569212969109448,0,0.764546456250458,0,1.68152568894461,0.263384084775077,0.786839080455332,0.786021525498329,2.05601498999509,0.334372990781356,1.62961133316795,3.78758244587787,1.94826728407911,3.00808233589969,2.3568472597987,3.32300841875432,2.43723477388514,1.28091319725675,2.21100890851793,0.328875809207352,1.10540007114339,0,0.593146252648242,1.33770414044857,1.04535523804977,0.453237370790265,1.14966148080576,6.18529401868734,2.53019692019503,0.637130828648193,0.651083453856419,0.950452044448374,0.602300476311091,0,0,0.947109008176067,0,3.83052812126992,1.06976078313403,4.34473211648397,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.8136500923276,23.2668158488995,0,0,0,0,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.792435906119034,5.80518723514162,1.29707958075265,2.65109110195398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.10795356625974,2.37190332345469,10.6524720112191,0,0,0,0,0,1.49801404789436,2.99161459204025,9.94597232246485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,2.37285620900479,1.06727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,1.52927441428475,0.569647187174163,0.476463550915578,0.822724546172388,1.94541993357815,4.86028293514303,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0.425846237690326,0,0,0,0.333698283423817,0,0,0,0,0,0,0,0.146508179271894,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.123084805461069,0,0,0,0,0,2.3948309234694,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788662062837943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0,1.24271716604159,0.496166021811951,0,0.121792598380896,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.59996218756479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | ||
|short_description=p@chr10:70849885..70849905,- | |short_description=p@chr10:70849885..70849905,- | ||
}} | }} |
Latest revision as of 15:03, 23 July 2015
Short description: | p@chr10:70849885..70849905, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:70849885..70849905, - |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.18e-37 | 98 |
blood island | 1.18e-37 | 98 |
hemolymphoid system | 3.49e-33 | 108 |
bone marrow | 6.58e-32 | 76 |
bone element | 6.14e-29 | 82 |
immune system | 3.62e-26 | 93 |
skeletal element | 1.36e-25 | 90 |
skeletal system | 3.61e-22 | 100 |
lateral plate mesoderm | 1.22e-13 | 203 |
connective tissue | 5.06e-10 | 371 |
musculoskeletal system | 6.15e-10 | 167 |
blood | 5.57e-08 | 15 |
haemolymphatic fluid | 5.57e-08 | 15 |
organism substance | 5.57e-08 | 15 |