FFCP PHASE1:Hg19::chr14:93121766..93121780,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:93121766..93121780,- | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_at_chr14:93121766..93121780,- | |description=CAGE_peak_at_chr14:93121766..93121780,- | ||
|id=chr14:93121766..93121780,- | |id=chr14:93121766..93121780,- | ||
|ontology_enrichment_celltype=CL:0002274!1.82e-24!5;CL:0000457!1.82e-24!5;CL:0002191!1.82e-24!5;CL:0000097!1.82e-24!5;CL:0000831!1.82e-24!5;CL:0002028!1.82e-24!5;CL:0000738!6.42e-24!140;CL:0000766!3.93e-20!76;CL:0002031!5.51e-20!124;CL:0000839!7.33e-20!70;CL:0000557!1.59e-19!71;CL:0002057!4.82e-19!42;CL:0002393!4.89e-19!9;CL:0002397!4.89e-19!9;CL:0000037!3.00e-18!172;CL:0000566!3.00e-18!172;CL:0000860!1.44e-17!45;CL:0002087!2.54e-17!119;CL:0000988!6.94e-17!182;CL:0000623!9.20e-16!3;CL:0000825!9.20e-16!3;CL:0002032!6.54e-15!165;CL:0000837!6.54e-15!165;CL:0000842!8.40e-15!3;CL:0000163!1.75e-13!9;CL:0000763!2.98e-12!112;CL:0000049!2.98e-12!112;CL:0002194!1.89e-11!63;CL:0000576!1.89e-11!63;CL:0000040!1.89e-11!63;CL:0000559!1.89e-11!63;CL:0000224!3.16e-11!4;CL:0002009!5.18e-11!65;CL:0000815!1.17e-10!2;CL:0000792!1.17e-10!2;CL:0002677!1.17e-10!2;CL:0000080!1.25e-07!6;CL:0000898!2.25e-07!3;CL:0000875!2.89e-07!3;CL:0002396!2.89e-07!3 | |ontology_enrichment_celltype=CL:0002274!1.82e-24!5;CL:0000457!1.82e-24!5;CL:0002191!1.82e-24!5;CL:0000097!1.82e-24!5;CL:0000831!1.82e-24!5;CL:0002028!1.82e-24!5;CL:0000738!6.42e-24!140;CL:0000766!3.93e-20!76;CL:0002031!5.51e-20!124;CL:0000839!7.33e-20!70;CL:0000557!1.59e-19!71;CL:0002057!4.82e-19!42;CL:0002393!4.89e-19!9;CL:0002397!4.89e-19!9;CL:0000037!3.00e-18!172;CL:0000566!3.00e-18!172;CL:0000860!1.44e-17!45;CL:0002087!2.54e-17!119;CL:0000988!6.94e-17!182;CL:0000623!9.20e-16!3;CL:0000825!9.20e-16!3;CL:0002032!6.54e-15!165;CL:0000837!6.54e-15!165;CL:0000842!8.40e-15!3;CL:0000163!1.75e-13!9;CL:0000763!2.98e-12!112;CL:0000049!2.98e-12!112;CL:0002194!1.89e-11!63;CL:0000576!1.89e-11!63;CL:0000040!1.89e-11!63;CL:0000559!1.89e-11!63;CL:0000224!3.16e-11!4;CL:0002009!5.18e-11!65;CL:0000815!1.17e-10!2;CL:0000792!1.17e-10!2;CL:0002677!1.17e-10!2;CL:0000080!1.25e-07!6;CL:0000898!2.25e-07!3;CL:0000875!2.89e-07!3;CL:0002396!2.89e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000097;7.72e-89;5!CL:0000163;6.09e-50;9!CL:0000151;2.51e-13;36!CL:0000766;4.90e-11;69!CL:0002393;1.50e-09;6!CL:0002397;1.50e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,6.64e-89,5;CL:0002028,6.64e-89,5;CL:0000163,5.60e-50,9;CL:0000151,2.66e-13,36;CL:0000839,1.15e-12,66;CL:0000557,1.71e-12,67;CL:0000766,1.07e-11,72;CL:0000763,4.22e-08,108;CL:0000049,4.22e-08,108;CL:0002031,2.26e-07,120;CL:0002393,8.85e-07,9;CL:0002397,8.85e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.44e-21!102;UBERON:0003061!4.44e-21!102;UBERON:0002193!1.01e-18!112;UBERON:0002371!7.27e-17!80;UBERON:0001474!2.12e-15!86;UBERON:0004765!1.69e-12!101;UBERON:0001434!1.69e-12!101;UBERON:0002405!1.78e-10!115;UBERON:0003081!5.32e-08!216;UBERON:0000178!1.08e-07!15;UBERON:0000179!1.08e-07!15;UBERON:0000463!1.08e-07!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.92e-11,76;UBERON:0001474,2.17e-10,82;UBERON:0004765,1.51e-09,90;UBERON:0002405,2.87e-09,93;UBERON:0002390,7.68e-09,98;UBERON:0003061,7.68e-09,98;UBERON:0001434,1.11e-08,100;UBERON:0002193,4.22e-08,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,1.30206522429511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0.224723484445085,0,0.320929027076094,0.639337125799041,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0.633765858935825,0.850417199860174,0.628975936525128,0.44931452458598,0.150176892841506,0.16072558669708,0.855038231223746,0,0.182664153764634,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0,0,0,0,0,0,0.651844533267181,0,0,0,0.294605907474837,0,0.270803863765016,0.25618263945135,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.088048434013226,5.1832028885193,4.90007841617669,1.8936365013957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985153801009636,0.862510299438069,0.77005821767849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.647142602455851,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,1.30206522429511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0.224723484445085,0,0.320929027076094,0.639337125799041,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0.633765858935825,0.850417199860174,0.628975936525128,0.44931452458598,0.150176892841506,0.16072558669708,0.855038231223746,0,0.182664153764634,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0,0,0,0,0,0,0.651844533267181,0,0,0,0.294605907474837,0,0.270803863765016,0.25618263945135,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.088048434013226,5.1832028885193,4.90007841617669,1.8936365013957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985153801009636,0.862510299438069,0.77005821767849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.647142602455851,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr14:93121766..93121780,- | |short_description=p@chr14:93121766..93121780,- | ||
}} | }} |
Latest revision as of 23:44, 24 July 2015
Short description: | p@chr14:93121766..93121780, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:93121766..93121780, - |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 6.64e-89 | 5 |
basophil mast progenitor cell | 6.64e-89 | 5 |
endocrine cell | 5.60e-50 | 9 |
secretory cell | 2.66e-13 | 36 |
myeloid lineage restricted progenitor cell | 1.15e-12 | 66 |
granulocyte monocyte progenitor cell | 1.71e-12 | 67 |
myeloid leukocyte | 1.07e-11 | 72 |
myeloid cell | 4.22e-08 | 108 |
common myeloid progenitor | 4.22e-08 | 108 |
hematopoietic lineage restricted progenitor cell | 2.26e-07 | 120 |
intermediate monocyte | 8.85e-07 | 9 |
CD14-positive, CD16-positive monocyte | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.92e-11 | 76 |
bone element | 2.17e-10 | 82 |
skeletal element | 1.51e-09 | 90 |
immune system | 2.87e-09 | 93 |
hematopoietic system | 7.68e-09 | 98 |
blood island | 7.68e-09 | 98 |
skeletal system | 1.11e-08 | 100 |
hemolymphoid system | 4.22e-08 | 108 |