FFCP PHASE1:Hg19::chr14:94492742..94492755,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=78990 | |EntrezGene=78990 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20351 | |HGNC=20351 | ||
|TSSclassifier=strong | |||
|UniProt=Q96DC9 | |UniProt=Q96DC9 | ||
|association_with_transcript=18bp_to_ENST00000553723,NM_023112,uc001ych.2,uc001yci.2_5end | |association_with_transcript=18bp_to_ENST00000553723,NM_023112,uc001ych.2,uc001yci.2_5end | ||
|cluster_id=chr14:94492742..94492755,+ | |||
|description=CAGE_peak_2_at_OTUB2_5end | |description=CAGE_peak_2_at_OTUB2_5end | ||
|id=chr14:94492742..94492755,+ | |id=chr14:94492742..94492755,+ | ||
|ontology_enrichment_celltype=CL:0000066!5.86e-09!254;CL:0002076!2.01e-08!43;CL:1000507!6.49e-07!12;CL:1000494!6.49e-07!12;CL:0000223!9.79e-07!59 | |ontology_enrichment_celltype=CL:0000066!5.86e-09!254;CL:0002076!2.01e-08!43;CL:1000507!6.49e-07!12;CL:1000494!6.49e-07!12;CL:0000223!9.79e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:1000507;2.31e-21;10!CL:1000494;2.31e-21;10!CL:1000449;9.32e-14;15!CL:0002681;2.42e-13;12!CL:0002584;2.42e-13;12!CL:0000239;4.89e-12;3!CL:1000615;4.89e-12;3!CL:0002306;4.89e-12;3!CL:1000497;5.73e-12;17!CL:0002518;5.73e-12;17!CL:0002621;7.34e-11;3!CL:0000650;1.58e-07;2!CL:1000500;1.58e-07;2!CL:1000618;1.58e-07;2!CL:1001318;1.58e-07;2!CL:0002173;1.58e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,2.42e-21,10;CL:1000494,2.42e-21,10;CL:1000449,9.59e-14,15;CL:0002681,2.52e-13,12;CL:0002584,2.52e-13,12;CL:0000239,4.98e-12,3;CL:1000615,4.98e-12,3;CL:0002306,4.98e-12,3;CL:1000497,5.87e-12,17;CL:0002518,5.87e-12,17;CL:0002621,7.98e-11,3;CL:0000066,9.78e-08,253;CL:0000650,1.89e-07,2;CL:1000500,1.89e-07,2;CL:1000618,1.89e-07,2;CL:1001318,1.89e-07,2;CL:0002173,1.89e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006554!7.53e-08!44;UBERON:0001008!1.90e-07!45;UBERON:0009773!6.49e-07!12;UBERON:0001231!6.49e-07!12;UBERON:0004810!6.49e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;2.31e-21;10!UBERON:0009773;2.31e-21;10!UBERON:0001231;2.31e-21;10!UBERON:0004810;2.31e-21;10!UBERON:0006555;9.32e-14;15!UBERON:0004819;9.32e-14;15!UBERON:0001285;9.32e-14;15!UBERON:0007684;9.32e-14;15!UBERON:0001225;2.42e-13;12!UBERON:0008987;2.42e-13;12!UBERON:0006853;4.89e-12;3!UBERON:0007685;4.89e-12;3!UBERON:0004134;4.89e-12;3!UBERON:0006554;1.39e-11;30!UBERON:0001008;1.39e-11;30!UBERON:0001949;7.34e-11;3!UBERON:0001851;1.86e-10;15!UBERON:0000353;1.86e-10;15!UBERON:0000486;1.83e-09;12!UBERON:0000489;4.36e-08;29!UBERON:0002113;4.59e-08;24!UBERON:0011143;4.59e-08;24!UBERON:0003567;1.58e-07;2!UBERON:0003838;1.58e-07;2!UBERON:0003586;1.58e-07;2!UBERON:0005169;1.58e-07;2!UBERON:0002321;1.58e-07;2!UBERON:0005215;1.58e-07;2!UBERON:0002303;1.58e-07;2!UBERON:0002319;1.58e-07;2!UBERON:0003350;6.70e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,2.42e-21,10;UBERON:0004211,9.59e-14,15;UBERON:0009773,9.59e-14,15;UBERON:0001231,9.59e-14,15;UBERON:0001285,9.59e-14,15;UBERON:0007684,9.59e-14,15;UBERON:0004208,9.59e-14,15;UBERON:0001225,2.52e-13,12;UBERON:0008987,2.52e-13,12;UBERON:0006555,8.54e-13,16;UBERON:0004819,8.54e-13,16;UBERON:0006853,4.98e-12,3;UBERON:0007685,4.98e-12,3;UBERON:0004134,4.98e-12,3;UBERON:0006554,3.46e-11,47;UBERON:0001008,6.91e-11,48;UBERON:0001949,7.98e-11,3;UBERON:0001851,1.91e-10,15;UBERON:0000353,1.91e-10,15;UBERON:0003567,1.89e-07,2;UBERON:0003838,1.89e-07,2;UBERON:0003586,1.89e-07,2;UBERON:0005169,1.89e-07,2;UBERON:0002321,1.89e-07,2;UBERON:0005215,1.89e-07,2;UBERON:0002303,1.89e-07,2;UBERON:0002319,1.89e-07,2;UBERON:0000489,1.91e-07,31;UBERON:0002113,2.48e-07,26;UBERON:0003918,2.48e-07,26;UBERON:0011143,2.48e-07,26;UBERON:0005095,2.48e-07,26;UBERON:0007687,2.48e-07,26;UBERON:0003350,7.14e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0.982935746006035,0.697801167972428,0,0.263766978228454,0,0,0,1.20538905604795,0.730310090387373,0.975865597581014,0.123121058076788,0,0.626909442956176,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0,0,0,0,0.553995408531877,0,0,0,0,0,0.145398238779565,0.755751887377619,0.970336244751265,0.232429036905685,0.411167888021826,0.619412741790207,0,0.256160706529101,0.236482229888585,0,0,0,0.564727018627814,0.545812300115692,0,0,0,0,0.329851300186716,0.797854630486527,0,0,0,0,0.251248665256743,0.521482918420201,0.65156653411535,0,0.736555271975129,0.316462387440884,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.779873198196215,0,0,0,0.25618263945135,0.260118695119756,0.328875809207352,0,0.579606171470105,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0.144846518960824,0,0,0.283604451492204,0,0.175669571386252,0.392937226493138,0.728590576585084,0.370784442784429,0,0,0.531831842075461,0,0,0,0,0,0,0,0,0,0.417989933073621,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0.949265659568129,0.366403487860815,0,0,0.436094052142534,0,0.12663051166458,0,0.286836620748814,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0.149448680551801,0,0.161872944368132,0,0.204154171254893,0.122834317311768,0.103325781175765,0,0,0,0,0,0.250237039743928,0.554128230968366,0,0,0,0,0.179389635688862,0,0,0,0.206105058476878,0,0,0.168776332241266,0,0.252433774244115,0,0,0.355009592516614,0,0,2.70565194428616,1.09098448236334,1.43402297694502,0.365921118388786,0.397589304964456,0.580969714347592,0.10366105501537,0.252320850875628,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,1.42675371031213,1.1240175325762,0.100528972411631,0.0925884451585296,0,0,0,0.463721619900307,0.587043471179108,0.144366447761074,0,0,0,0.858486162094873,0,1.63802985597466,0.594524649154913,0,0.839910640994298,0.708875486211932,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0,0,0,0.224262168690721,0,0.07333828582095,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0.542621605391443,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0.502257091432126,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,2.60279707715243,0,0.670065061337395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0.195801157462741,0,0,0.215714200818617,0,0.303127571446259,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.246381468041427,1.03850885836724,0,0,7.21823293091825,0.184161977871793,0,0.364182336013434,0.262248829918848,1.80479845162965,1.07821471946181,0,5.84556898613043,0.949964660035881,0,0.680374821106063,0.215915916102139,0,1.08378575017541,1.50506932156456,5.60727800699084,4.15538004464362,7.83561641527624,0,0,0.256450125116389,0.328014645699706,1.30151357865721,0.412164046590889,0,0.330037999682352,0,0,0,0.096670718292122,0.154048617114644,0,0,0.107420244868274,0,0.255679882248303,0.0890320356467374,0.661139661443912,1.53752053892085,0.127612712494584,0.30347334256665,0,0.62962469366128,2.0911118104818,0,0,0,1.11194531462352,0.286249773483982,0,0.316379424718726,0.190630193923825,0.255897791311334,0,0.318203247925937,0,0,0,0.235624804691373,0.606547444719948,1.58510321173008,0,0.48763373908959,0.243713489631284,0,0,0.282810863907425,0,1.10273068709225,0,0.438450885253763,0,0,0,0.6196469961995,0,0.143411352204052,0.196498082026242,0,0,0.211107635297664,0,0,0,0.288666338176536,1.34060455107157,0,0.659006605437454,1.72202149068492,0,0.443430153536676,1.37834040124176,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0.478278818186467,0,0,0,0.324621940274555,0,0,0.156679895773023,0,0.846458889008016,0,0,0.425846237690326,0,0,0.223676107892416,0.166849141711909,0.781552381608161,0,0,0,0,0,0,0.879049075631364,0,1.33732061132974,0.284136146806413,0,0,0,0,0.140669416410513,0.333926115068718,0,0,0,0,1.51159648712566,0.102268682502155,0,0,0.539210106883961,0.358042349351218,0,0,0,0,0,0,1.99613798001194,0,0.174919999992391,0,1.137934482855,0.254253650292766,0,1.37897349296586,0,0.173624994933292,0,0.120596438625408,0,0,0,0,0,0.139423744278603,0.153900517007594,0.113942055847001,0,0.718061155278177,0.651884231532048,0,0.0915975934018623,0.533034776018635,0,0.31396051279005,0.166211681900156,0,0,0,0,0,3.58696709697646,0,0.141353071433941,0.432777279484182,0,0,0,0,0,0.208843899010911,0.067401132980677,0.802577647298789,0.234264445725339,0,0,0.242780379534093,0,0,1.22429104652196,0,0.300646838828985,0.414752765588989,0,0.330991955875499,1.56966459203613,2.38944859545918,0.569219092059585,0.416024019039416,0.694238953340524,0.0979923974143777,0.435296032902013,0,0,0,0,0,0.290967049465258,0,0.225980740780532,0.548167698587004,0.993573058514948,0,0.586654148204409,1.04206466326994,0,0.999048047910651,2.4495370916198,0.229073192331831,0.514784993585894,0,0,0.235694034616795,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0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| ||
|short_description=p2@OTUB2 | |short_description=p2@OTUB2 | ||
}} | }} |
Latest revision as of 17:00, 16 September 2015
Short description: | p2@OTUB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_OTUB2_5end |
Coexpression cluster: | NA |
Association with transcript: | 18bp_to_ENST00000553723, NM_023112, uc001ych.2, uc001yci.2_5end |
EntrezGene: | OTUB2 |
HGNC: | 20351 |
UniProt: | Q96DC9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 2.42e-21 | 10 |
nephron tubule epithelial cell | 2.42e-21 | 10 |
epithelial cell of nephron | 9.59e-14 | 15 |
kidney cortical cell | 2.52e-13 | 12 |
renal cortical epithelial cell | 2.52e-13 | 12 |
brush border epithelial cell | 4.98e-12 | 3 |
kidney cortex tubule cell | 4.98e-12 | 3 |
epithelial cell of proximal tubule | 4.98e-12 | 3 |
kidney cell | 5.87e-12 | 17 |
kidney epithelial cell | 5.87e-12 | 17 |
gingival epithelial cell | 7.98e-11 | 3 |
epithelial cell | 9.78e-08 | 253 |
mesangial cell | 1.89e-07 | 2 |
kidney interstitial cell | 1.89e-07 | 2 |
juxtaglomerular complex cell | 1.89e-07 | 2 |
renal interstitial pericyte | 1.89e-07 | 2 |
extraglomerular mesangial cell | 1.89e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 2.42e-21 | 10 |
nephron epithelium | 9.59e-14 | 15 |
renal tubule | 9.59e-14 | 15 |
nephron tubule | 9.59e-14 | 15 |
nephron | 9.59e-14 | 15 |
uriniferous tubule | 9.59e-14 | 15 |
nephrogenic mesenchyme | 9.59e-14 | 15 |
cortex of kidney | 2.52e-13 | 12 |
renal parenchyma | 2.52e-13 | 12 |
excretory tube | 8.54e-13 | 16 |
kidney epithelium | 8.54e-13 | 16 |
renal cortex tubule | 4.98e-12 | 3 |
region of nephron tubule | 4.98e-12 | 3 |
proximal tubule | 4.98e-12 | 3 |
urinary system structure | 3.46e-11 | 47 |
renal system | 6.91e-11 | 48 |
gingival epithelium | 7.98e-11 | 3 |
cortex | 1.91e-10 | 15 |
parenchyma | 1.91e-10 | 15 |
abdomen connective tissue | 1.89e-07 | 2 |
abdominal segment connective tissue | 1.89e-07 | 2 |
trunk connective tissue | 1.89e-07 | 2 |
interstitial tissue | 1.89e-07 | 2 |
extraglomerular mesangium | 1.89e-07 | 2 |
kidney interstitium | 1.89e-07 | 2 |
juxtaglomerular apparatus | 1.89e-07 | 2 |
mesangium | 1.89e-07 | 2 |
cavitated compound organ | 1.91e-07 | 31 |
kidney | 2.48e-07 | 26 |
kidney mesenchyme | 2.48e-07 | 26 |
upper urinary tract | 2.48e-07 | 26 |
kidney rudiment | 2.48e-07 | 26 |
kidney field | 2.48e-07 | 26 |
epithelium of mucosa | 7.14e-07 | 8 |