FFCP PHASE1:Mm9::chr6:67999951..67999958,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=18 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-18bp_to_ENSMUST00000103316_5end | |association_with_transcript=-18bp_to_ENSMUST00000103316_5end | ||
|cluster_id=chr6:67999951..67999958,+ | |||
|description=CAGE_peak_1_at_ENSMUST00000103316_5end | |description=CAGE_peak_1_at_ENSMUST00000103316_5end | ||
|id=chr6:67999951..67999958,+ | |id=chr6:67999951..67999958,+ | ||
|ontology_enrichment_celltype=CL:0000553!1.03e-11!6;CL:0000556!1.03e-11!6;CL:0000050!1.92e-07!9 | |ontology_enrichment_celltype=CL:0000553!1.03e-11!6;CL:0000556!1.03e-11!6;CL:0000050!1.92e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.27e-28,6;CL:0000556,1.27e-28,6;CL:0000050,5.82e-19,9;CL:0002027,8.81e-15,3;CL:0002006,8.81e-15,3;CL:0002024,8.81e-15,3;CL:0000839,5.37e-13,13;CL:0000763,1.79e-10,16;CL:0002031,8.27e-09,25;CL:0000049,9.64e-09,19 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.89e-11!48;UBERON:0002390!5.19e-08!45;UBERON:0003061!5.19e-08!45;UBERON:0002405!2.73e-07!70;UBERON:0002106!3.61e-07!6;UBERON:0004457!3.61e-07!6;UBERON:0000042!3.61e-07!6;UBERON:0004854!3.61e-07!6;UBERON:0009034!3.61e-07!6;UBERON:0002095!3.61e-07!6;UBERON:0004782!3.61e-07!6;UBERON:0003281!3.61e-07!6;UBERON:0009664!3.61e-07!6;UBERON:0002296!3.61e-07!6;UBERON:0005602!3.61e-07!6;UBERON:0001179!3.61e-07!6;UBERON:0006293!3.61e-07!6;UBERON:0002465!9.47e-07!3 | |ontology_enrichment_uberon=UBERON:0002193!5.89e-11!48;UBERON:0002390!5.19e-08!45;UBERON:0003061!5.19e-08!45;UBERON:0002405!2.73e-07!70;UBERON:0002106!3.61e-07!6;UBERON:0004457!3.61e-07!6;UBERON:0000042!3.61e-07!6;UBERON:0004854!3.61e-07!6;UBERON:0009034!3.61e-07!6;UBERON:0002095!3.61e-07!6;UBERON:0004782!3.61e-07!6;UBERON:0003281!3.61e-07!6;UBERON:0009664!3.61e-07!6;UBERON:0002296!3.61e-07!6;UBERON:0005602!3.61e-07!6;UBERON:0001179!3.61e-07!6;UBERON:0006293!3.61e-07!6;UBERON:0002465!9.47e-07!3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,2.14e-15,3;UBERON:0001962,1.29e-10,2;UBERON:0001961,1.29e-10,2;UBERON:0001744,1.29e-10,2;UBERON:0002193,1.46e-10,48;UBERON:0002405,1.46e-10,48;UBERON:0002371,1.79e-10,16;UBERON:0001474,5.49e-10,22;UBERON:0004765,5.49e-10,22;UBERON:0001434,5.49e-10,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.3230490435205,14.7806945194573,3.49780939064073,36.1204179335182,47.7158228947971,12.3072999021429,0.680346321208558,0,0,20.7990149631429,10.782236210157,0,0,0,0,5.54466285471848,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,22.4828692117367,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.08296475241462,54.8948313332004,0,0,0,0,0,0,0,0,0,5.30766331169925,0,0.441683036920787,0,0,0,0,3.32094171771169,0,0,0,0,0,0,0,0,0,0,0,1.11966273549084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0.162137619091711,0,0.439100230582101,0,0,0,0,0.793351699990633,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324270453550071,0.274561413188081,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0.221464689648775,0.478364305972461,0.655453258862952,0.690739927463582,0.144649058581512,0,0,0,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,17.0870880797853,0,0.185194527369712,0.941842285023455,0.820165366326151,9.60868327467395,0.849892149969277,0.839708713941948,0.967399816630967,0,0,0,0,0,0,0,0,0,1.42576470620972,2.4853572523477,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0,0.302478555410522,0.487289403698762,0.865906574762965,0.935015217452552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.3230490435205,14.7806945194573,3.49780939064073,36.1204179335182,47.7158228947971,12.3072999021429,0.680346321208558,0,0,20.7990149631429,10.782236210157,0,0,0,0,5.54466285471848,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,22.4828692117367,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.08296475241462,54.8948313332004,0,0,0,0,0,0,0,0,0,5.30766331169925,0,0.441683036920787,0,0,0,0,3.32094171771169,0,0,0,0,0,0,0,0,0,0,0,1.11966273549084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0.162137619091711,0,0.439100230582101,0,0,0,0,0.793351699990633,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324270453550071,0.274561413188081,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0.221464689648775,0.478364305972461,0.655453258862952,0.690739927463582,0.144649058581512,0,0,0,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,17.0870880797853,0,0.185194527369712,0.941842285023455,0.820165366326151,9.60868327467395,0.849892149969277,0.839708713941948,0.967399816630967,0,0,0,0,0,0,0,0,0,1.42576470620972,2.4853572523477,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0,0.302478555410522,0.487289403698762,0.865906574762965,0.935015217452552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@ENSMUST00000103316 | |short_description=p1@ENSMUST00000103316 | ||
}} | }} |
Latest revision as of 01:16, 6 August 2015
Short description: | p1@ENSMUST00000103316 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000103316_5end |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | -18bp_to_ENSMUST00000103316_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.27e-28 | 6 |
megakaryocyte | 1.27e-28 | 6 |
megakaryocyte-erythroid progenitor cell | 5.82e-19 | 9 |
CD9-positive, CD41-positive megakaryocyte cell | 8.81e-15 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 8.81e-15 | 3 |
Kit-positive megakaryocyte progenitor cell | 8.81e-15 | 3 |
myeloid lineage restricted progenitor cell | 5.37e-13 | 13 |
myeloid cell | 1.79e-10 | 16 |
hematopoietic lineage restricted progenitor cell | 8.27e-09 | 25 |
common myeloid progenitor | 9.64e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 2.14e-15 | 3 |
gut-associated lymphoid tissue | 1.29e-10 | 2 |
mucosa-associated lymphoid tissue | 1.29e-10 | 2 |
lymphoid tissue | 1.29e-10 | 2 |
hemolymphoid system | 1.46e-10 | 48 |
immune system | 1.46e-10 | 48 |
bone marrow | 1.79e-10 | 16 |
bone element | 5.49e-10 | 22 |
skeletal element | 5.49e-10 | 22 |
skeletal system | 5.49e-10 | 22 |