FFCP PHASE1:Hg19::chr10:101691084..101691100,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:101691084..101691100,-
|short_description=p8@DNMBP
|description=CAGE_peak_8_at_DNMBP_5end
|association_with_transcript=-331bp_to_ENST00000543621,uc001kqh....") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23268 | |EntrezGene=23268 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30373 | |HGNC=30373 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-331bp_to_ENST00000543621,uc001kqh.2_5end | |||
|cluster_id=chr10:101691084..101691100,- | |||
|coexpression_cluster_id=C221 | |||
|description=CAGE_peak_8_at_DNMBP_5end | |||
|id=chr10:101691084..101691100,- | |||
|ontology_enrichment_celltype=CL:0000066!1.42e-11!254;CL:1000507!9.91e-08!12;CL:1000494!9.91e-08!12;CL:0002588!1.43e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000322;6.76e-18;3!CL:0002202;7.48e-07;9!CL:0002632;7.48e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,6.76e-18,3;CL:0002202,7.48e-07,9;CL:0002632,7.48e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4929!6.81e-09!2;DOID:0050615!2.95e-07!16 | |||
|ontology_enrichment_disease_v019=DOID:3910;4.32e-26;2!DOID:4929;8.10e-26;2!DOID:3908;2.66e-11;5!DOID:1325;1.89e-08;7!DOID:3904;1.89e-08;7!DOID:3905;7.48e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,4.32e-26,2;DOID:4929,9.18e-26,2;DOID:3908,2.66e-11,5;DOID:1325,1.89e-08,7;DOID:3904,1.89e-08,7;DOID:3905,7.48e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0000488!5.11e-09!4;UBERON:0000058!3.34e-08!26;UBERON:0000464!6.11e-08!104;UBERON:0009773!9.91e-08!12;UBERON:0001231!9.91e-08!12;UBERON:0004810!9.91e-08!12;UBERON:0000466!1.34e-07!126 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;5.12e-50;1!UBERON:0003703;5.12e-50;1!UBERON:0001174;5.12e-50;1!UBERON:0004914;5.12e-50;1!UBERON:0004903;4.32e-26;2!UBERON:0002173;4.32e-26;2!UBERON:0002186;4.32e-26;2!UBERON:0000058;8.12e-21;10!UBERON:0004821;6.76e-18;3!UBERON:0007499;6.76e-18;3!UBERON:0003215;6.76e-18;3!UBERON:0010368;6.76e-18;3!UBERON:0009911;6.76e-18;3!UBERON:0002299;6.76e-18;3!UBERON:0006524;6.76e-18;3!UBERON:0008874;6.76e-18;3!UBERON:0002169;6.76e-18;3!UBERON:0004894;6.76e-18;3!UBERON:0002114;1.03e-17;2!UBERON:0009856;8.82e-14;4!UBERON:0002394;1.21e-13;4!UBERON:0003928;1.21e-13;4!UBERON:0002108;3.42e-11;4!UBERON:0002294;2.26e-08;7!UBERON:0001173;2.26e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,6.58e-50,1;UBERON:0003703,6.58e-50,1;UBERON:0001174,6.58e-50,1;UBERON:0004914,6.58e-50,1;UBERON:0004903,4.32e-26,2;UBERON:0002173,4.32e-26,2;UBERON:0002186,4.32e-26,2;UBERON:0004821,6.76e-18,3;UBERON:0003215,6.76e-18,3;UBERON:0010368,6.76e-18,3;UBERON:0009911,6.76e-18,3;UBERON:0002299,6.76e-18,3;UBERON:0006524,6.76e-18,3;UBERON:0008874,6.76e-18,3;UBERON:0002169,6.76e-18,3;UBERON:0004894,6.76e-18,3;UBERON:0002114,1.12e-17,2;UBERON:0000058,1.72e-11,19;UBERON:0002108,3.60e-11,4;UBERON:0002394,1.57e-09,6;UBERON:0003928,1.57e-09,6;UBERON:0007499,5.49e-09,25;UBERON:0009856,1.11e-08,26;UBERON:0002294,8.85e-07,9;UBERON:0001173,8.85e-07,9;UBERON:0004912,8.85e-07,9 | |||
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| ||
|short_description=p8@DNMBP | |||
}} | }} |
Latest revision as of 19:29, 15 September 2015
Short description: | p8@DNMBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_DNMBP_5end |
Coexpression cluster: | C221_alveolar_Osteoblast_Myoblast_mesenchymal_liposarcoma_Smooth_hepatocellular |
Association with transcript: | -331bp_to_ENST00000543621, uc001kqh.2_5end |
EntrezGene: | DNMBP |
HGNC: | 30373 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 6.76e-18 | 3 |
epithelial cell of tracheobronchial tree | 7.48e-07 | 9 |
epithelial cell of lower respiratory tract | 7.48e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 6.58e-50 | 1 |
extrahepatic bile duct | 6.58e-50 | 1 |
common bile duct | 6.58e-50 | 1 |
duodenal papilla | 6.58e-50 | 1 |
bronchoalveolar duct junction | 4.32e-26 | 2 |
alveolar duct | 4.32e-26 | 2 |
bronchiole | 4.32e-26 | 2 |
pulmonary alveolus epithelium | 6.76e-18 | 3 |
alveolus | 6.76e-18 | 3 |
pulmonary lobule | 6.76e-18 | 3 |
lobule | 6.76e-18 | 3 |
alveolus of lung | 6.76e-18 | 3 |
alveolar system | 6.76e-18 | 3 |
pulmonary acinus | 6.76e-18 | 3 |
alveolar sac | 6.76e-18 | 3 |
alveolar wall | 6.76e-18 | 3 |
duodenum | 1.12e-17 | 2 |
duct | 1.72e-11 | 19 |
small intestine | 3.60e-11 | 4 |
bile duct | 1.57e-09 | 6 |
digestive system duct | 1.57e-09 | 6 |
epithelial sac | 5.49e-09 | 25 |
sac | 1.11e-08 | 26 |
biliary system | 8.85e-07 | 9 |
biliary tree | 8.85e-07 | 9 |
biliary bud | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 4.32e-26 | 2 |
tubular adenocarcinoma | 9.18e-26 | 2 |
non-small cell lung carcinoma | 2.66e-11 | 5 |
bronchus cancer | 1.89e-08 | 7 |
bronchogenic carcinoma | 1.89e-08 | 7 |
lung carcinoma | 7.48e-07 | 9 |