FFCP PHASE1:Hg19::chr11:113941620..113941630,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:113941620..113941630,+ | |||
|coexpression_cluster_id=C9 | |||
|description=CAGE_peak_at_chr11:113941620..113941630,+ | |description=CAGE_peak_at_chr11:113941620..113941630,+ | ||
|id=chr11:113941620..113941630,+ | |id=chr11:113941620..113941630,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004874;5.05e-34;1 | |||
|ontology_enrichment_disease=DOID:114!1.53e-21!2;DOID:178!1.31e-11!1;DOID:326!1.31e-11!1;DOID:3978!1.31e-11!1;DOID:3394!1.31e-11!1;DOID:5844!1.31e-11!1;DOID:1287!2.97e-11!4 | |||
|ontology_enrichment_disease_v019=DOID:114;4.68e-66;2!DOID:178;8.34e-34;1!DOID:326;8.34e-34;1!DOID:3978;8.34e-34;1!DOID:3394;8.34e-34;1!DOID:5844;8.34e-34;1!DOID:1287;1.07e-33;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,3.96e-66,2;DOID:178,7.06e-34,1;DOID:326,7.06e-34,1;DOID:3978,7.06e-34,1;DOID:3394,7.06e-34,1;DOID:5844,7.06e-34,1;DOID:1287,9.88e-34,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.54e-25!115;UBERON:0001630!1.53e-21!2;UBERON:0005090!1.53e-21!2;UBERON:0005418!8.62e-12!1;UBERON:0001389!8.62e-12!1;UBERON:0000026!8.62e-12!1;UBERON:0008784!8.62e-12!1;UBERON:0006058!8.62e-12!1;UBERON:0003663!8.62e-12!1;UBERON:0001383!8.62e-12!1;UBERON:0004256!8.62e-12!1;UBERON:0002529!8.62e-12!1;UBERON:0004708!8.62e-12!1;UBERON:0002101!8.62e-12!1;UBERON:0004709!8.62e-12!1;UBERON:0003661!8.62e-12!1;UBERON:0002471!8.62e-12!1;UBERON:0004357!8.62e-12!1;UBERON:0009872!8.62e-12!1;UBERON:0004347!8.62e-12!1;UBERON:0005420!8.62e-12!1;UBERON:0005732!8.62e-12!1;UBERON:0006057!8.62e-12!1;UBERON:0000978!8.62e-12!1;UBERON:0002103!8.62e-12!1;UBERON:0001665!8.62e-12!1;UBERON:0003823!8.62e-12!1;UBERON:0000154!8.62e-12!1;UBERON:0005733!8.62e-12!1;UBERON:0005730!8.62e-12!1;UBERON:0000989!1.18e-11!1;UBERON:0008811!1.18e-11!1;UBERON:0006258!1.18e-11!1;UBERON:0005876!1.18e-11!1;UBERON:0004874!1.18e-11!1;UBERON:0002426!1.60e-11!1;UBERON:0003831!1.60e-11!1;UBERON:0003898!1.60e-11!1;UBERON:0004830!1.60e-11!1;UBERON:0001774!1.60e-11!1;UBERON:0003830!1.60e-11!1;UBERON:0005175!1.60e-11!1;UBERON:0003897!1.60e-11!1;UBERON:0001103!1.60e-11!1;UBERON:0010084!1.60e-11!1;UBERON:0001301!2.18e-11!1;UBERON:0002135!2.42e-11!1;UBERON:0002046!9.57e-09!5;UBERON:0004117!9.57e-09!5;UBERON:0007689!9.57e-09!5;UBERON:0007123!9.57e-09!5;UBERON:0003091!9.57e-09!5 | |ontology_enrichment_uberon=UBERON:0007023!1.54e-25!115;UBERON:0001630!1.53e-21!2;UBERON:0005090!1.53e-21!2;UBERON:0005418!8.62e-12!1;UBERON:0001389!8.62e-12!1;UBERON:0000026!8.62e-12!1;UBERON:0008784!8.62e-12!1;UBERON:0006058!8.62e-12!1;UBERON:0003663!8.62e-12!1;UBERON:0001383!8.62e-12!1;UBERON:0004256!8.62e-12!1;UBERON:0002529!8.62e-12!1;UBERON:0004708!8.62e-12!1;UBERON:0002101!8.62e-12!1;UBERON:0004709!8.62e-12!1;UBERON:0003661!8.62e-12!1;UBERON:0002471!8.62e-12!1;UBERON:0004357!8.62e-12!1;UBERON:0009872!8.62e-12!1;UBERON:0004347!8.62e-12!1;UBERON:0005420!8.62e-12!1;UBERON:0005732!8.62e-12!1;UBERON:0006057!8.62e-12!1;UBERON:0000978!8.62e-12!1;UBERON:0002103!8.62e-12!1;UBERON:0001665!8.62e-12!1;UBERON:0003823!8.62e-12!1;UBERON:0000154!8.62e-12!1;UBERON:0005733!8.62e-12!1;UBERON:0005730!8.62e-12!1;UBERON:0000989!1.18e-11!1;UBERON:0008811!1.18e-11!1;UBERON:0006258!1.18e-11!1;UBERON:0005876!1.18e-11!1;UBERON:0004874!1.18e-11!1;UBERON:0002426!1.60e-11!1;UBERON:0003831!1.60e-11!1;UBERON:0003898!1.60e-11!1;UBERON:0004830!1.60e-11!1;UBERON:0001774!1.60e-11!1;UBERON:0003830!1.60e-11!1;UBERON:0005175!1.60e-11!1;UBERON:0003897!1.60e-11!1;UBERON:0001103!1.60e-11!1;UBERON:0010084!1.60e-11!1;UBERON:0001301!2.18e-11!1;UBERON:0002135!2.42e-11!1;UBERON:0002046!9.57e-09!5;UBERON:0004117!9.57e-09!5;UBERON:0007689!9.57e-09!5;UBERON:0007123!9.57e-09!5;UBERON:0003091!9.57e-09!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0001389;1.84e-34;1!UBERON:0000026;1.84e-34;1!UBERON:0008784;1.84e-34;1!UBERON:0006058;1.84e-34;1!UBERON:0003663;1.84e-34;1!UBERON:0004256;1.84e-34;1!UBERON:0004708;1.84e-34;1!UBERON:0002101;1.84e-34;1!UBERON:0004709;1.84e-34;1!UBERON:0002529;1.84e-34;1!UBERON:0010538;1.84e-34;1!UBERON:0003661;1.84e-34;1!UBERON:0010890;1.84e-34;1!UBERON:0002471;1.84e-34;1!UBERON:0001383;1.84e-34;1!UBERON:0010758;1.84e-34;1!UBERON:0010707;1.84e-34;1!UBERON:0000978;1.84e-34;1!UBERON:0002103;1.84e-34;1!UBERON:0001665;1.84e-34;1!UBERON:0003823;1.84e-34;1!UBERON:0000154;1.84e-34;1!UBERON:0010709;1.84e-34;1!UBERON:0000989;5.05e-34;1!UBERON:0008811;5.05e-34;1!UBERON:0005090;5.48e-18;2!UBERON:0001630;5.48e-18;2!UBERON:0001134;2.45e-09;16!UBERON:0002036;2.45e-09;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,1.84e-34,1;UBERON:0001389,1.84e-34,1;UBERON:0000026,1.84e-34,1;UBERON:0008784,1.84e-34,1;UBERON:0006058,1.84e-34,1;UBERON:0003663,1.84e-34,1;UBERON:0004256,1.84e-34,1;UBERON:0004708,1.84e-34,1;UBERON:0002101,1.84e-34,1;UBERON:0004709,1.84e-34,1;UBERON:0002529,1.84e-34,1;UBERON:0010538,1.84e-34,1;UBERON:0003661,1.84e-34,1;UBERON:0010890,1.84e-34,1;UBERON:0002471,1.84e-34,1;UBERON:0001383,1.84e-34,1;UBERON:0004357,1.84e-34,1;UBERON:0004347,1.84e-34,1;UBERON:0005420,1.84e-34,1;UBERON:0005732,1.84e-34,1;UBERON:0010758,1.84e-34,1;UBERON:0010707,1.84e-34,1;UBERON:0000978,1.84e-34,1;UBERON:0002103,1.84e-34,1;UBERON:0001665,1.84e-34,1;UBERON:0003823,1.84e-34,1;UBERON:0000154,1.84e-34,1;UBERON:0010709,1.84e-34,1;UBERON:0005733,1.84e-34,1;UBERON:0005730,1.84e-34,1;UBERON:0000989,5.05e-34,1;UBERON:0008811,5.05e-34,1;UBERON:0006258,5.05e-34,1;UBERON:0005876,5.05e-34,1;UBERON:0004874,5.05e-34,1;UBERON:0005090,5.48e-18,2;UBERON:0001630,5.48e-18,2;UBERON:0007023,7.60e-11,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61158997199083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,1.99679000498991,3.004582336956,0.669514372325618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,2.48105589194647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.9548669759521,10.1636178787685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0,0,0,0.12729431655633,0.202117188958219,0.217716747896961,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61158997199083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,1.99679000498991,3.004582336956,0.669514372325618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,2.48105589194647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.9548669759521,10.1636178787685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0,0,0,0.12729431655633,0.202117188958219,0.217716747896961,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr11:113941620..113941630,+ | |short_description=p@chr11:113941620..113941630,+ | ||
}} | }} |
Latest revision as of 18:21, 23 July 2015
Short description: | p@chr11:113941620..113941630, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:113941620..113941630, + |
Coexpression cluster: | C9_skeletal_diaphragm_tongue_throat_penis_heart_left |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 1.84e-34 | 1 |
soleus muscle | 1.84e-34 | 1 |
appendage | 1.84e-34 | 1 |
lower limb segment | 1.84e-34 | 1 |
multi-limb segment region | 1.84e-34 | 1 |
hindlimb muscle | 1.84e-34 | 1 |
hindlimb zeugopod muscle | 1.84e-34 | 1 |
paired limb/fin | 1.84e-34 | 1 |
limb | 1.84e-34 | 1 |
pelvic appendage | 1.84e-34 | 1 |
limb segment | 1.84e-34 | 1 |
paired limb/fin segment | 1.84e-34 | 1 |
limb muscle | 1.84e-34 | 1 |
pelvic complex muscle | 1.84e-34 | 1 |
zeugopod | 1.84e-34 | 1 |
muscle of leg | 1.84e-34 | 1 |
paired limb/fin bud | 1.84e-34 | 1 |
limb bud | 1.84e-34 | 1 |
pelvic appendage bud | 1.84e-34 | 1 |
limb/fin field | 1.84e-34 | 1 |
subdivision of organism along appendicular axis | 1.84e-34 | 1 |
appendage girdle complex | 1.84e-34 | 1 |
leg | 1.84e-34 | 1 |
hindlimb | 1.84e-34 | 1 |
triceps surae | 1.84e-34 | 1 |
hindlimb zeugopod | 1.84e-34 | 1 |
posterior region of body | 1.84e-34 | 1 |
pelvic complex | 1.84e-34 | 1 |
limb field | 1.84e-34 | 1 |
hindlimb/pelvic fin field | 1.84e-34 | 1 |
penis | 5.05e-34 | 1 |
intromittent organ | 5.05e-34 | 1 |
lateral plate mesenchyme | 5.05e-34 | 1 |
undifferentiated genital tubercle | 5.05e-34 | 1 |
somatopleure | 5.05e-34 | 1 |
muscle structure | 5.48e-18 | 2 |
muscle organ | 5.48e-18 | 2 |
adult organism | 7.60e-11 | 114 |
Ontology term | p-value | n |
---|---|---|
heart disease | 3.96e-66 | 2 |
vascular disease | 7.06e-34 | 1 |
ischemia | 7.06e-34 | 1 |
extrinsic cardiomyopathy | 7.06e-34 | 1 |
myocardial ischemia | 7.06e-34 | 1 |
myocardial infarction | 7.06e-34 | 1 |
cardiovascular system disease | 9.88e-34 | 4 |