FFCP PHASE1:Hg19::chr10:117419477..117419497,+: Difference between revisions
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|id=chr10:117419477..117419497,+
|short_description=p@chr10:117419477..117419497,+
|description=CAGE_peak_at_chr10:117419477..117419497,+
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:117419477..117419497,+ | |||
|coexpression_cluster_id=C1107 | |||
|description=CAGE_peak_at_chr10:117419477..117419497,+ | |||
|id=chr10:117419477..117419497,+ | |||
|ontology_enrichment_celltype=CL:0000515!7.50e-20!4;CL:0002590!1.37e-14!3;CL:0002551!2.42e-12!6;CL:0000188!3.28e-08!9;CL:0000680!1.13e-07!57;CL:0000056!1.13e-07!57;CL:0000355!1.13e-07!57;CL:0000708!4.86e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000056;2.86e-56;4!CL:0000515;3.62e-34;3!CL:0000680;1.42e-32;7!CL:0000228;5.93e-26;1!CL:0002372;5.93e-26;1!CL:0002321;1.21e-15;15!CL:0002561;1.37e-13;2!CL:0000737;1.69e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000515,2.60e-56,4;CL:0000228,5.93e-26,1;CL:0002372,5.93e-26,1;CL:0002561,1.21e-13,2;CL:0000737,1.69e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000515;2.86e-56;4!UBERON:0005425;9.79e-26;1!UBERON:0003056;1.67e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.10e-13!83;UBERON:0002329!1.10e-13!83;UBERON:0003077!1.10e-13!83;UBERON:0003059!1.10e-13!83;UBERON:0007282!1.10e-13!83;UBERON:0009618!1.10e-13!83;UBERON:0007285!1.10e-13!83;UBERON:0004290!1.95e-11!70;UBERON:0000486!1.09e-10!82;UBERON:0002360!1.25e-09!2;UBERON:0000094!1.25e-09!2;UBERON:0007645!1.25e-09!2;UBERON:0005284!6.19e-09!5;UBERON:0002067!2.98e-08!9;UBERON:0004016!2.98e-08!9;UBERON:0010083!2.98e-08!9;UBERON:0003210!4.86e-07!3;UBERON:0001134!4.96e-07!61;UBERON:0002036!4.96e-07!61;UBERON:0003082!4.96e-07!61;UBERON:0002385!9.66e-07!63;UBERON:0001015!9.66e-07!63;UBERON:0000383!9.66e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;4.61e-26;1!UBERON:0000941;9.79e-26;1!UBERON:0001785;9.79e-26;1!UBERON:0002464;9.79e-26;1!UBERON:0004904;9.79e-26;1!UBERON:0001021;9.79e-26;1!UBERON:0001134;1.03e-14;16!UBERON:0002036;1.03e-14;16!UBERON:0003714;1.37e-13;2!UBERON:0005162;1.37e-13;2!UBERON:0000122;1.37e-13;2!UBERON:0005933;1.37e-13;2!UBERON:0005942;1.37e-13;2!UBERON:0005932;1.37e-13;2!UBERON:0002385;9.14e-08;31!UBERON:0001015;9.14e-08;31!UBERON:0000383;9.14e-08;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,4.61e-26,1;UBERON:0000941,9.79e-26,1;UBERON:0001785,9.79e-26,1;UBERON:0002464,9.79e-26,1;UBERON:0004904,9.79e-26,1;UBERON:0001021,9.79e-26,1;UBERON:0003902,9.79e-26,1;UBERON:0005425,9.79e-26,1;UBERON:0005933,1.21e-13,2;UBERON:0005942,1.21e-13,2;UBERON:0005932,1.21e-13,2;UBERON:0003714,1.37e-13,2;UBERON:0005162,1.37e-13,2;UBERON:0000122,1.37e-13,2;UBERON:0001781,1.92e-07,4 | |||
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|short_description=p@chr10:117419477..117419497,+ | |||
}} | }} |
Latest revision as of 10:44, 23 July 2015
Short description: | p@chr10:117419477..117419497, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:117419477..117419497, + |
Coexpression cluster: | C1107_Myoblast_mesenchymal_skeletal_diaphragm_tongue_Prostate_penis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 2.60e-56 | 4 |
multinucleate cell | 5.93e-26 | 1 |
myotube | 5.93e-26 | 1 |
outer root sheath cell | 1.21e-13 | 2 |
striated muscle cell | 1.69e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 4.61e-26 | 1 |
cranial nerve II | 9.79e-26 | 1 |
cranial nerve | 9.79e-26 | 1 |
nerve trunk | 9.79e-26 | 1 |
nerve connecting eye with brain | 9.79e-26 | 1 |
nerve | 9.79e-26 | 1 |
retinal neural layer | 9.79e-26 | 1 |
presumptive neural retina | 9.79e-26 | 1 |
hair root sheath | 1.21e-13 | 2 |
hair outer root sheath | 1.21e-13 | 2 |
bulb of hair follicle | 1.21e-13 | 2 |
neural tissue | 1.37e-13 | 2 |
multi cell component structure | 1.37e-13 | 2 |
neuron projection bundle | 1.37e-13 | 2 |
layer of retina | 1.92e-07 | 4 |