FFCP PHASE1:Hg19::chr11:22689648..22689665,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2620 | |EntrezGene=2620 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4167 | |HGNC=4167 | ||
|TSSclassifier=strong | |||
|UniProt=O43903,Q7Z3X8 | |UniProt=O43903,Q7Z3X8 | ||
|association_with_transcript=0bp_to_ENST00000278187,ENST00000524701,NM_177553,uc001mqm.2,uc001mqn.2_5end | |association_with_transcript=0bp_to_ENST00000278187,ENST00000524701,NM_177553,uc001mqm.2,uc001mqn.2_5end | ||
|cluster_id=chr11:22689648..22689665,+ | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_11_at_GAS2_5end | |description=CAGE_peak_11_at_GAS2_5end | ||
|id=chr11:22689648..22689665,+ | |id=chr11:22689648..22689665,+ | ||
|ontology_enrichment_celltype=CL:0000945!1.14e-07!24;CL:0000826!1.14e-07!24 | |ontology_enrichment_celltype=CL:0000945!1.14e-07!24;CL:0000826!1.14e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000945;2.14e-17;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.22e-17,24;CL:0000826,2.22e-17,24;CL:0000838,4.80e-08,52;CL:0000542,6.82e-08,53;CL:0000051,6.82e-08,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2355!8.67e-07!1 | |ontology_enrichment_disease=DOID:2355!8.67e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:2355;1.22e-17;1!DOID:74;1.71e-09;2!DOID:0060058;1.79e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,1.03e-17,1;DOID:74,1.57e-09,2;DOID:0060058,1.85e-07,10 | |||
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|short_description=p11@GAS2 | |short_description=p11@GAS2 | ||
}} | }} |
Latest revision as of 09:37, 17 September 2015
Short description: | p11@GAS2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_GAS2_5end |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | 0bp_to_ENST00000278187, ENST00000524701, NM_177553, uc001mqm.2, uc001mqn.2_5end |
EntrezGene: | GAS2 |
HGNC: | 4167 |
UniProt: | O43903Q7Z3X8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.22e-17 | 24 |
pro-B cell | 2.22e-17 | 24 |
lymphoid lineage restricted progenitor cell | 4.80e-08 | 52 |
lymphocyte | 6.82e-08 | 53 |
common lymphoid progenitor | 6.82e-08 | 53 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 1.64e-33 | 2 |
hindlimb bud | 4.44e-18 | 1 |
soleus muscle | 4.44e-18 | 1 |
appendage | 4.44e-18 | 1 |
lower limb segment | 4.44e-18 | 1 |
multi-limb segment region | 4.44e-18 | 1 |
hindlimb muscle | 4.44e-18 | 1 |
hindlimb zeugopod muscle | 4.44e-18 | 1 |
paired limb/fin | 4.44e-18 | 1 |
limb | 4.44e-18 | 1 |
pelvic appendage | 4.44e-18 | 1 |
limb segment | 4.44e-18 | 1 |
paired limb/fin segment | 4.44e-18 | 1 |
limb muscle | 4.44e-18 | 1 |
pelvic complex muscle | 4.44e-18 | 1 |
zeugopod | 4.44e-18 | 1 |
muscle of leg | 4.44e-18 | 1 |
paired limb/fin bud | 4.44e-18 | 1 |
limb bud | 4.44e-18 | 1 |
pelvic appendage bud | 4.44e-18 | 1 |
limb/fin field | 4.44e-18 | 1 |
subdivision of organism along appendicular axis | 4.44e-18 | 1 |
appendage girdle complex | 4.44e-18 | 1 |
leg | 4.44e-18 | 1 |
hindlimb | 4.44e-18 | 1 |
triceps surae | 4.44e-18 | 1 |
hindlimb zeugopod | 4.44e-18 | 1 |
posterior region of body | 4.44e-18 | 1 |
pelvic complex | 4.44e-18 | 1 |
limb field | 4.44e-18 | 1 |
hindlimb/pelvic fin field | 4.44e-18 | 1 |
gland of diencephalon | 2.59e-17 | 4 |
neuroendocrine gland | 2.59e-17 | 4 |
diencephalon | 2.58e-10 | 7 |
future diencephalon | 2.58e-10 | 7 |
muscle structure | 1.03e-09 | 2 |
muscle organ | 1.03e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
anemia | 1.03e-17 | 1 |
hematopoietic system disease | 1.57e-09 | 2 |
lymphoma | 1.85e-07 | 10 |