FFCP PHASE1:Hg19::chr16:59079517..59079537,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:59079517..59079537,- | |||
|description=CAGE_peak_at_chr16:59079517..59079537,- | |description=CAGE_peak_at_chr16:59079517..59079537,- | ||
|id=chr16:59079517..59079537,- | |id=chr16:59079517..59079537,- | ||
|ontology_enrichment_celltype=CL:0000359!7.19e-22!32;CL:0002144!2.15e-19!3;CL:0002166!1.00e-18!3;CL:0000192!3.65e-16!42;CL:0000514!3.65e-16!42;CL:0002539!5.79e-16!10;CL:0000222!5.36e-15!119;CL:0000183!5.11e-13!59;CL:0000187!4.14e-12!54;CL:0002139!1.04e-11!24;CL:0000680!2.31e-11!57;CL:0000056!2.31e-11!57;CL:0000355!2.31e-11!57;CL:0000393!1.08e-10!60;CL:0000211!1.08e-10!60;CL:0000220!1.54e-09!246;CL:0002321!2.01e-09!248;CL:0000071!2.01e-08!18;CL:0002546!2.01e-08!18;CL:0000115!9.36e-08!35;CL:0002594!3.97e-07!4;CL:1000306!7.27e-07!4;CL:0002547!7.27e-07!4 | |ontology_enrichment_celltype=CL:0000359!7.19e-22!32;CL:0002144!2.15e-19!3;CL:0002166!1.00e-18!3;CL:0000192!3.65e-16!42;CL:0000514!3.65e-16!42;CL:0002539!5.79e-16!10;CL:0000222!5.36e-15!119;CL:0000183!5.11e-13!59;CL:0000187!4.14e-12!54;CL:0002139!1.04e-11!24;CL:0000680!2.31e-11!57;CL:0000056!2.31e-11!57;CL:0000355!2.31e-11!57;CL:0000393!1.08e-10!60;CL:0000211!1.08e-10!60;CL:0000220!1.54e-09!246;CL:0002321!2.01e-09!248;CL:0000071!2.01e-08!18;CL:0002546!2.01e-08!18;CL:0000115!9.36e-08!35;CL:0002594!3.97e-07!4;CL:1000306!7.27e-07!4;CL:0002547!7.27e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002539;5.52e-40;10!CL:0000359;2.06e-25;32!CL:0002595;1.63e-20;5!CL:0000192;7.94e-17;43!CL:0000187;9.74e-11;55!CL:0002144;1.41e-09;3!CL:0000393;1.75e-07;61!CL:0000211;1.75e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0002539,5.25e-40,10;CL:0000359,7.71e-28,32;CL:0000192,8.71e-21,43;CL:0000514,8.71e-21,43;CL:0002595,1.64e-20,5;CL:0000187,2.69e-16,55;CL:0000680,1.84e-15,58;CL:0000056,1.84e-15,58;CL:0000355,1.84e-15,58;CL:0000393,1.04e-14,61;CL:0000211,1.04e-14,61;CL:0000222,4.25e-13,121;CL:0002144,1.54e-09,3 | |||
|ontology_enrichment_development_v019=CL:0000514;7.94e-17;43!CL:0000355;3.46e-10;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!7.62e-32!69;UBERON:0001637!2.65e-30!42;UBERON:0003509!2.65e-30!42;UBERON:0004572!2.65e-30!42;UBERON:0002049!3.38e-30!79;UBERON:0007798!3.38e-30!79;UBERON:0001981!6.96e-30!60;UBERON:0007500!6.96e-30!60;UBERON:0004537!6.96e-30!60;UBERON:0006965!6.96e-30!60;UBERON:0004872!2.79e-25!84;UBERON:0004573!5.71e-25!33;UBERON:0004571!5.71e-25!33;UBERON:0004535!1.23e-22!110;UBERON:0001009!6.48e-22!113;UBERON:0001915!2.15e-19!3;UBERON:0001982!2.15e-19!3;UBERON:0000947!6.60e-18!21;UBERON:0010191!6.60e-18!21;UBERON:0003914!7.81e-17!118;UBERON:0004237!5.79e-16!10;UBERON:0004695!5.79e-16!10;UBERON:0002111!5.79e-16!10;UBERON:0004178!5.79e-16!10;UBERON:0001708!3.45e-14!4;UBERON:0001704!3.45e-14!4;UBERON:0000914!6.51e-12!83;UBERON:0002329!6.51e-12!83;UBERON:0003077!6.51e-12!83;UBERON:0003059!6.51e-12!83;UBERON:0007282!6.51e-12!83;UBERON:0009618!6.51e-12!83;UBERON:0007285!6.51e-12!83;UBERON:0001135!1.46e-10!15;UBERON:0001134!1.76e-10!61;UBERON:0002036!1.76e-10!61;UBERON:0003082!1.76e-10!61;UBERON:0002385!4.39e-10!63;UBERON:0001015!4.39e-10!63;UBERON:0000383!4.39e-10!63;UBERON:0002090!1.25e-09!6;UBERON:0000490!1.63e-09!138;UBERON:0004290!7.17e-09!70;UBERON:0004111!8.37e-09!241;UBERON:0000486!1.01e-08!82;UBERON:0000025!1.50e-08!194;UBERON:0001986!2.01e-08!18;UBERON:0004638!2.01e-08!18;UBERON:0004852!2.01e-08!18;UBERON:0000477!2.25e-08!286;UBERON:0003081!3.35e-08!216;UBERON:0001310!3.97e-07!4;UBERON:0000415!7.27e-07!4;UBERON:0007240!7.27e-07!4;UBERON:0005742!7.27e-07!4;UBERON:0005734!7.27e-07!4;UBERON:0004664!7.27e-07!4;UBERON:0004663!7.27e-07!4;UBERON:0000487!7.63e-07!22;UBERON:0005256!9.62e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0004237;5.52e-40;10!UBERON:0004695;5.52e-40;10!UBERON:0002111;5.52e-40;10!UBERON:0004178;5.52e-40;10!UBERON:0001135;7.01e-27;15!UBERON:0004573;6.30e-23;33!UBERON:0004571;6.30e-23;33!UBERON:0003834;1.63e-20;5!UBERON:0001533;1.63e-20;5!UBERON:0000947;2.27e-19;21!UBERON:0010191;2.27e-19;21!UBERON:0001637;2.83e-16;42!UBERON:0003509;2.83e-16;42!UBERON:0004572;2.83e-16;42!UBERON:0003513;5.81e-15;7!UBERON:0002385;3.71e-13;31!UBERON:0001015;3.71e-13;31!UBERON:0000383;3.71e-13;31!UBERON:0007500;7.49e-12;56!UBERON:0001981;7.49e-12;56!UBERON:0004537;7.49e-12;56!UBERON:0010523;1.41e-09;3!UBERON:0001915;1.41e-09;3!UBERON:0001982;1.41e-09;3!UBERON:0000055;2.74e-08;65!UBERON:0002049;1.45e-07;75!UBERON:0007798;1.45e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004237,5.25e-40,10;UBERON:0004695,5.25e-40,10;UBERON:0002111,5.25e-40,10;UBERON:0004178,5.25e-40,10;UBERON:0004573,5.27e-27,33;UBERON:0004571,5.27e-27,33;UBERON:0001135,6.78e-27,15;UBERON:0001637,2.82e-21,42;UBERON:0003509,2.82e-21,42;UBERON:0004572,2.82e-21,42;UBERON:0007500,1.60e-20,59;UBERON:0001981,1.60e-20,59;UBERON:0004537,1.60e-20,59;UBERON:0006965,1.60e-20,59;UBERON:0003834,1.64e-20,5;UBERON:0001533,1.64e-20,5;UBERON:0000947,2.22e-19,21;UBERON:0010191,2.22e-19,21;UBERON:0000055,8.03e-18,68;UBERON:0002049,1.51e-15,78;UBERON:0007798,1.51e-15,78;UBERON:0003513,5.81e-15,7;UBERON:0004872,1.29e-14,83;UBERON:0001134,1.78e-14,62;UBERON:0002036,1.78e-14,62;UBERON:0003082,1.78e-14,62;UBERON:0002385,5.00e-14,64;UBERON:0001015,5.00e-14,64;UBERON:0000383,5.00e-14,64;UBERON:0002329,1.17e-12,71;UBERON:0003059,1.17e-12,71;UBERON:0007282,1.17e-12,71;UBERON:0004290,1.17e-12,71;UBERON:0009618,1.17e-12,71;UBERON:0003077,1.75e-12,72;UBERON:0007285,1.75e-12,72;UBERON:0007524,2.59e-12,73;UBERON:0007503,1.57e-11,78;UBERON:0004535,3.91e-11,109;UBERON:0000486,7.67e-11,83;UBERON:0001009,7.77e-11,112;UBERON:0003914,2.26e-10,117;UBERON:0010523,1.54e-09,3;UBERON:0001915,1.54e-09,3;UBERON:0001982,1.54e-09,3;UBERON:0000490,3.48e-08,148;UBERON:0005256,2.20e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.70627602516243,3.61616716814386,0.730310090387373,2.92759679274304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0.417989933073621,0.258416759169329,0.35576626268671,0,0.402829317109147,2.28081631715554,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0.93733833986777,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.89867656792079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.66153015158511,0,0.55597265731176,0,0,0,0,0,0,0,0,0,0,0,0.606547444719948,0,0,0,0,0,0,0,0,0,1.99031692572366,1.31535265576129,0,0,0.608731130888112,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.70627602516243,3.61616716814386,0.730310090387373,2.92759679274304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0.417989933073621,0.258416759169329,0.35576626268671,0,0.402829317109147,2.28081631715554,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0.93733833986777,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.89867656792079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.66153015158511,0,0.55597265731176,0,0,0,0,0,0,0,0,0,0,0,0.606547444719948,0,0,0,0,0,0,0,0,0,1.99031692572366,1.31535265576129,0,0,0.608731130888112,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr16:59079517..59079537,- | |short_description=p@chr16:59079517..59079537,- | ||
}} | }} |
Latest revision as of 06:39, 17 September 2015
Short description: | p@chr16:59079517..59079537, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:59079517..59079537, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
aortic smooth muscle cell | 5.25e-40 | 10 |
vascular associated smooth muscle cell | 7.71e-28 | 32 |
smooth muscle cell | 8.71e-21 | 43 |
smooth muscle myoblast | 8.71e-21 | 43 |
smooth muscle cell of the subclavian artery | 1.64e-20 | 5 |
muscle cell | 2.69e-16 | 55 |
muscle precursor cell | 1.84e-15 | 58 |
myoblast | 1.84e-15 | 58 |
multi-potent skeletal muscle stem cell | 1.84e-15 | 58 |
electrically responsive cell | 1.04e-14 | 61 |
electrically active cell | 1.04e-14 | 61 |
mesodermal cell | 4.25e-13 | 121 |
capillary endothelial cell | 1.54e-09 | 3 |