FFCP PHASE1:Hg19::chr16:84587633..84587644,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:84587633..84587644,- | |||
|description=CAGE_peak_at_chr16:84587633..84587644,- | |description=CAGE_peak_at_chr16:84587633..84587644,- | ||
|id=chr16:84587633..84587644,- | |id=chr16:84587633..84587644,- | ||
|ontology_enrichment_celltype=CL:0000791!1.17e-36!18;CL:0000789!1.17e-36!18;CL:0002420!1.17e-36!18;CL:0002419!1.17e-36!18;CL:0000790!1.17e-36!18;CL:0000084!2.38e-34!25;CL:0000827!2.38e-34!25;CL:0000624!2.97e-25!6;CL:0000838!1.47e-21!52;CL:0000542!4.52e-21!53;CL:0000051!4.52e-21!53;CL:0000625!1.18e-17!11;CL:0000898!2.52e-13!3;CL:0002087!2.74e-11!119;CL:0000815!3.68e-09!2;CL:0000792!3.68e-09!2;CL:0002677!3.68e-09!2;CL:0000738!7.20e-09!140;CL:0002031!1.79e-08!124 | |ontology_enrichment_celltype=CL:0000791!1.17e-36!18;CL:0000789!1.17e-36!18;CL:0002420!1.17e-36!18;CL:0002419!1.17e-36!18;CL:0000790!1.17e-36!18;CL:0000084!2.38e-34!25;CL:0000827!2.38e-34!25;CL:0000624!2.97e-25!6;CL:0000838!1.47e-21!52;CL:0000542!4.52e-21!53;CL:0000051!4.52e-21!53;CL:0000625!1.18e-17!11;CL:0000898!2.52e-13!3;CL:0002087!2.74e-11!119;CL:0000815!3.68e-09!2;CL:0000792!3.68e-09!2;CL:0002677!3.68e-09!2;CL:0000738!7.20e-09!140;CL:0002031!1.79e-08!124 | ||
|ontology_enrichment_celltype_v019=CL:0000895;4.10e-23;1!CL:0000624;1.52e-15;6!CL:0000898;1.30e-08;3!CL:0000084;1.41e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000810,3.28e-23,1;CL:0000895,3.28e-23,1;CL:0002436,3.28e-23,1;CL:0002427,3.28e-23,1;CL:0002428,3.28e-23,1;CL:0002429,3.28e-23,1;CL:0002433,3.28e-23,1;CL:0002431,3.28e-23,1;CL:0002432,3.28e-23,1;CL:0000624,1.41e-15,6;CL:0000893,2.59e-12,2;CL:0002489,2.59e-12,2;CL:0000809,2.59e-12,2;CL:0000808,2.59e-12,2;CL:0000894,2.59e-12,2;CL:0000806,2.59e-12,2;CL:0000807,2.59e-12,2;CL:0000805,2.59e-12,2;CL:0002425,2.59e-12,2;CL:0000898,1.21e-08,3;CL:0000084,1.41e-08,25;CL:0000827,1.41e-08,25 | |||
|ontology_enrichment_development_v019=CL:0002427;4.10e-23;1!CL:0002425;2.90e-12;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.04e-10!4;UBERON:0005058!1.04e-10!4;UBERON:0009113!1.04e-10!4;UBERON:0003295!1.04e-10!4;UBERON:0005562!1.04e-10!4;UBERON:0004177!2.84e-10!7;UBERON:0003351!2.90e-07!6;UBERON:0001042!3.06e-07!10;UBERON:0009145!3.06e-07!10;UBERON:0003408!3.38e-07!10;UBERON:0000974!3.97e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.85e-12;2!UBERON:0005058;1.85e-12;2!UBERON:0009113;1.85e-12;2!UBERON:0002114;1.30e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.60e-23,4;UBERON:0005058,4.60e-23,4;UBERON:0009113,4.60e-23,4;UBERON:0003295,4.60e-23,4;UBERON:0005562,4.60e-23,4;UBERON:0003351,9.74e-16,6;UBERON:0004177,1.23e-13,7;UBERON:0005057,1.23e-13,7;UBERON:0000974,7.74e-10,10;UBERON:0003408,7.74e-10,10;UBERON:0001042,7.74e-10,10;UBERON:0009145,7.74e-10,10;UBERON:0006562,5.00e-09,11;UBERON:0009722,5.00e-09,11;UBERON:0007690,5.00e-09,11;UBERON:0002114,1.51e-08,2 | |||
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|short_description=p@chr16:84587633..84587644,- | |short_description=p@chr16:84587633..84587644,- | ||
}} | }} |
Latest revision as of 12:54, 25 July 2015
Short description: | p@chr16:84587633..84587644, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:84587633..84587644, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta thymocyte | 3.28e-23 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 3.28e-23 | 1 |
mature CD4 single-positive thymocyte | 3.28e-23 | 1 |
resting double-positive thymocyte | 3.28e-23 | 1 |
double-positive blast | 3.28e-23 | 1 |
CD69-positive double-positive thymocyte | 3.28e-23 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 3.28e-23 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 3.28e-23 | 1 |
CD24-positive, CD4 single-positive thymocyte | 3.28e-23 | 1 |
CD4-positive, alpha-beta T cell | 1.41e-15 | 6 |
thymocyte | 2.59e-12 | 2 |
double negative thymocyte | 2.59e-12 | 2 |
double-positive, alpha-beta thymocyte | 2.59e-12 | 2 |
DN4 thymocyte | 2.59e-12 | 2 |
DN1 thymic pro-T cell | 2.59e-12 | 2 |
DN2 thymocyte | 2.59e-12 | 2 |
DN3 thymocyte | 2.59e-12 | 2 |
immature single positive thymocyte | 2.59e-12 | 2 |
early T lineage precursor | 2.59e-12 | 2 |
naive T cell | 1.21e-08 | 3 |
T cell | 1.41e-08 | 25 |
pro-T cell | 1.41e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
thymus | 4.60e-23 | 4 |
hemolymphoid system gland | 4.60e-23 | 4 |
thymic region | 4.60e-23 | 4 |
pharyngeal gland | 4.60e-23 | 4 |
thymus primordium | 4.60e-23 | 4 |
pharyngeal epithelium | 9.74e-16 | 6 |
hemopoietic organ | 1.23e-13 | 7 |
immune organ | 1.23e-13 | 7 |
neck | 7.74e-10 | 10 |
gland of gut | 7.74e-10 | 10 |
chordate pharynx | 7.74e-10 | 10 |
pharyngeal region of foregut | 7.74e-10 | 10 |
pharynx | 5.00e-09 | 11 |
entire pharyngeal arch endoderm | 5.00e-09 | 11 |
early pharyngeal endoderm | 5.00e-09 | 11 |
duodenum | 1.51e-08 | 2 |