FFCP PHASE1:Hg19::chr12:113645636..113645652,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:113645636..113645652,+ | |||
|description=CAGE_peak_at_chr12:113645636..113645652,+ | |description=CAGE_peak_at_chr12:113645636..113645652,+ | ||
|id=chr12:113645636..113645652,+ | |id=chr12:113645636..113645652,+ | ||
|ontology_enrichment_celltype=CL:0000037!6.99e-45!172;CL:0000566!6.99e-45!172;CL:0000988!2.65e-41!182;CL:0002087!9.76e-41!119;CL:0000738!4.51e-40!140;CL:0002194!5.61e-40!63;CL:0000576!5.61e-40!63;CL:0000040!5.61e-40!63;CL:0000559!5.61e-40!63;CL:0000839!7.39e-39!70;CL:0002009!2.20e-38!65;CL:0002032!3.38e-38!165;CL:0000837!3.38e-38!165;CL:0000766!6.10e-37!76;CL:0002031!6.49e-37!124;CL:0000557!3.91e-36!71;CL:0000763!1.36e-35!112;CL:0000049!1.36e-35!112;CL:0002057!4.36e-32!42;CL:0000860!2.41e-29!45;CL:0000134!5.29e-14!358;CL:0002320!2.32e-13!365;CL:0000219!1.14e-11!390;CL:0000048!1.73e-08!430;CL:0000034!3.95e-08!444;CL:0000723!4.02e-08!436;CL:0002619!2.99e-07!3 | |ontology_enrichment_celltype=CL:0000037!6.99e-45!172;CL:0000566!6.99e-45!172;CL:0000988!2.65e-41!182;CL:0002087!9.76e-41!119;CL:0000738!4.51e-40!140;CL:0002194!5.61e-40!63;CL:0000576!5.61e-40!63;CL:0000040!5.61e-40!63;CL:0000559!5.61e-40!63;CL:0000839!7.39e-39!70;CL:0002009!2.20e-38!65;CL:0002032!3.38e-38!165;CL:0000837!3.38e-38!165;CL:0000766!6.10e-37!76;CL:0002031!6.49e-37!124;CL:0000557!3.91e-36!71;CL:0000763!1.36e-35!112;CL:0000049!1.36e-35!112;CL:0002057!4.36e-32!42;CL:0000860!2.41e-29!45;CL:0000134!5.29e-14!358;CL:0002320!2.32e-13!365;CL:0000219!1.14e-11!390;CL:0000048!1.73e-08!430;CL:0000034!3.95e-08!444;CL:0000723!4.02e-08!436;CL:0002619!2.99e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000576;1.08e-10;48!CL:0000860;1.15e-08;33!CL:0002057;1.15e-08;33!CL:0000763;1.74e-08;100!CL:0000473;2.28e-08;39!CL:0000234;2.28e-08;39!CL:0000766;8.16e-08;69!CL:0000738;3.56e-07;136!CL:0000771;4.04e-07;2!CL:0002253;4.04e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.50e-17,136;CL:0000037,8.68e-16,168;CL:0002087,2.71e-15,115;CL:0000988,6.87e-15,177;CL:0000766,1.05e-14,72;CL:0002194,1.13e-14,59;CL:0000576,1.13e-14,59;CL:0000040,1.13e-14,59;CL:0000559,1.13e-14,59;CL:0002031,1.37e-14,120;CL:0002032,2.55e-14,161;CL:0000837,2.55e-14,161;CL:0002009,3.62e-14,61;CL:0000839,4.94e-13,66;CL:0000557,7.96e-13,67;CL:0000763,1.66e-11,108;CL:0000049,1.66e-11,108;CL:0000473,2.15e-08,48;CL:0000234,2.15e-08,48;CL:0002253,2.91e-07,2;CL:0000771,3.70e-07,2;CL:0000860,8.00e-07,42;CL:0002057,8.00e-07,42 | |||
|ontology_enrichment_development_v019=CL:0002057;5.66e-07;42 | |||
|ontology_enrichment_disease=DOID:2531!1.56e-16!51;DOID:0060083!1.56e-16!51;DOID:0060058!2.64e-12!10;DOID:1240!4.69e-08!39;DOID:8692!1.00e-06!31 | |ontology_enrichment_disease=DOID:2531!1.56e-16!51;DOID:0060083!1.56e-16!51;DOID:0060058!2.64e-12!10;DOID:1240!4.69e-08!39;DOID:8692!1.00e-06!31 | ||
|ontology_enrichment_disease_v019=DOID:0060058;2.34e-11;10!DOID:2531;3.49e-09;51!DOID:0060083;3.49e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,6.74e-14,51;DOID:0060083,6.74e-14,51;DOID:0060058,2.47e-11,10;DOID:1240,2.06e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.14e-36!102;UBERON:0003061!1.14e-36!102;UBERON:0002371!2.17e-34!80;UBERON:0002193!1.71e-33!112;UBERON:0001474!4.16e-31!86;UBERON:0002405!9.96e-28!115;UBERON:0004765!5.63e-26!101;UBERON:0001434!5.63e-26!101;UBERON:0002384!1.73e-12!375;UBERON:0003081!5.46e-12!216;UBERON:0002204!5.86e-11!167 | |ontology_enrichment_uberon=UBERON:0002390!1.14e-36!102;UBERON:0003061!1.14e-36!102;UBERON:0002371!2.17e-34!80;UBERON:0002193!1.71e-33!112;UBERON:0001474!4.16e-31!86;UBERON:0002405!9.96e-28!115;UBERON:0004765!5.63e-26!101;UBERON:0001434!5.63e-26!101;UBERON:0002384!1.73e-12!375;UBERON:0003081!5.46e-12!216;UBERON:0002204!5.86e-11!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.35e-11,76;UBERON:0001474,2.59e-10,82;UBERON:0004765,2.60e-09,90;UBERON:0002405,5.59e-09,93;UBERON:0002390,1.81e-08,98;UBERON:0003061,1.81e-08,98;UBERON:0001434,2.79e-08,100;UBERON:0002193,1.37e-07,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.0821005894499457,0.314843125254717,0,0,0.154816123316076,0,0,0,3.17615522379237,1.13735385989937,0.293600439334847,0.553995408531877,0.802177789880567,0.651032612147555,2.01523926815932,0.32389366601898,0.77272670290256,1.01778767145695,1.13362783106643,0.485168122375632,0.232429036905685,0,0.619412741790207,0.575384784644301,0.256160706529101,0,0.689491361473237,1.93645405075148,0,1.31769637679823,0.545812300115692,0.449446968890169,0.612167784741805,0.962787081228281,0.639337125799041,0.659702600373432,0.398927315243264,0,0.870627715885752,0,0.622822248995575,0.251248665256743,0,0,1.21079900526674,0,0.316462387440884,0,0,0,0.22465726229299,0.600707571366025,0.964353520182481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0.324547393654683,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97316789473185,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0.738651018262192,0,0.148631162288728,0,0,0,0,0,0,0,0.264145302039678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0,0.144269212976445,2.06311345710401,0,0,0.191505370132367,0,0,0.280797178113459,0.456469358066384,0.313359791546046,0,0,0,0,0.425846237690326,0.343505344755765,0.921722292925374,1.11838053946208,1.50164227540718,0,0,0,0,0,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0.156980256395025,0.166211681900156,0,0,0,0,0,0,0,0,1.94749775767882,0,0,0,0,0,0,0,0,0,0.547364367646998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0.395223263795889,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0.0939839179798536,0,0.299823467774787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0.151557396436479,0,0,0,0,0.23806443146374,0.452122368852043,0.186224142887574,0,0.0636471582781649,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.0821005894499457,0.314843125254717,0,0,0.154816123316076,0,0,0,3.17615522379237,1.13735385989937,0.293600439334847,0.553995408531877,0.802177789880567,0.651032612147555,2.01523926815932,0.32389366601898,0.77272670290256,1.01778767145695,1.13362783106643,0.485168122375632,0.232429036905685,0,0.619412741790207,0.575384784644301,0.256160706529101,0,0.689491361473237,1.93645405075148,0,1.31769637679823,0.545812300115692,0.449446968890169,0.612167784741805,0.962787081228281,0.639337125799041,0.659702600373432,0.398927315243264,0,0.870627715885752,0,0.622822248995575,0.251248665256743,0,0,1.21079900526674,0,0.316462387440884,0,0,0,0.22465726229299,0.600707571366025,0.964353520182481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0.324547393654683,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97316789473185,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0.738651018262192,0,0.148631162288728,0,0,0,0,0,0,0,0.264145302039678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0,0.144269212976445,2.06311345710401,0,0,0.191505370132367,0,0,0.280797178113459,0.456469358066384,0.313359791546046,0,0,0,0,0.425846237690326,0.343505344755765,0.921722292925374,1.11838053946208,1.50164227540718,0,0,0,0,0,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0.156980256395025,0.166211681900156,0,0,0,0,0,0,0,0,1.94749775767882,0,0,0,0,0,0,0,0,0,0.547364367646998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0.395223263795889,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0.0939839179798536,0,0.299823467774787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0.151557396436479,0,0,0,0,0.23806443146374,0.452122368852043,0.186224142887574,0,0.0636471582781649,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:113645636..113645652,+ | |short_description=p@chr12:113645636..113645652,+ | ||
}} | }} |
Latest revision as of 05:12, 24 July 2015
Short description: | p@chr12:113645636..113645652, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:113645636..113645652, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.50e-17 | 136 |
hematopoietic stem cell | 8.68e-16 | 168 |
nongranular leukocyte | 2.71e-15 | 115 |
hematopoietic cell | 6.87e-15 | 177 |
myeloid leukocyte | 1.05e-14 | 72 |
monopoietic cell | 1.13e-14 | 59 |
monocyte | 1.13e-14 | 59 |
monoblast | 1.13e-14 | 59 |
promonocyte | 1.13e-14 | 59 |
hematopoietic lineage restricted progenitor cell | 1.37e-14 | 120 |
hematopoietic oligopotent progenitor cell | 2.55e-14 | 161 |
hematopoietic multipotent progenitor cell | 2.55e-14 | 161 |
macrophage dendritic cell progenitor | 3.62e-14 | 61 |
myeloid lineage restricted progenitor cell | 4.94e-13 | 66 |
granulocyte monocyte progenitor cell | 7.96e-13 | 67 |
myeloid cell | 1.66e-11 | 108 |
common myeloid progenitor | 1.66e-11 | 108 |
defensive cell | 2.15e-08 | 48 |
phagocyte | 2.15e-08 | 48 |
epithelial cell of large intestine | 2.91e-07 | 2 |
eosinophil | 3.70e-07 | 2 |
classical monocyte | 8.00e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.00e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.35e-11 | 76 |
bone element | 2.59e-10 | 82 |
skeletal element | 2.60e-09 | 90 |
immune system | 5.59e-09 | 93 |
hematopoietic system | 1.81e-08 | 98 |
blood island | 1.81e-08 | 98 |
skeletal system | 2.79e-08 | 100 |
hemolymphoid system | 1.37e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 6.74e-14 | 51 |
immune system cancer | 6.74e-14 | 51 |
lymphoma | 2.47e-11 | 10 |
leukemia | 2.06e-07 | 39 |