FFCP PHASE1:Hg19::chr12:123187893..123187911,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=338442 | |EntrezGene=338442 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24827 | |HGNC=24827 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TDS4 | |UniProt=Q8TDS4 | ||
|association_with_transcript=0bp_to_NM_177551,uc001ucx.1_5end | |association_with_transcript=0bp_to_NM_177551,uc001ucx.1_5end | ||
|cluster_id=chr12:123187893..123187911,- | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_1_at_HCAR2_5end | |description=CAGE_peak_1_at_HCAR2_5end | ||
|id=chr12:123187893..123187911,- | |id=chr12:123187893..123187911,- | ||
|ontology_enrichment_celltype=CL:0002057!1.08e-31!42;CL:0000860!4.15e-28!45;CL:0000766!9.58e-27!76;CL:0002009!1.45e-23!65;CL:0000557!3.59e-23!71;CL:0002194!4.43e-22!63;CL:0000576!4.43e-22!63;CL:0000040!4.43e-22!63;CL:0000559!4.43e-22!63;CL:0000839!5.87e-20!70;CL:0000738!3.23e-14!140;CL:0000763!6.30e-14!112;CL:0000049!6.30e-14!112;CL:0002087!1.75e-10!119;CL:0002031!5.42e-10!124;CL:0000037!2.76e-08!172;CL:0000566!2.76e-08!172;CL:0000094!1.61e-07!8;CL:0002032!1.97e-07!165;CL:0000837!1.97e-07!165 | |ontology_enrichment_celltype=CL:0002057!1.08e-31!42;CL:0000860!4.15e-28!45;CL:0000766!9.58e-27!76;CL:0002009!1.45e-23!65;CL:0000557!3.59e-23!71;CL:0002194!4.43e-22!63;CL:0000576!4.43e-22!63;CL:0000040!4.43e-22!63;CL:0000559!4.43e-22!63;CL:0000839!5.87e-20!70;CL:0000738!3.23e-14!140;CL:0000763!6.30e-14!112;CL:0000049!6.30e-14!112;CL:0002087!1.75e-10!119;CL:0002031!5.42e-10!124;CL:0000037!2.76e-08!172;CL:0000566!2.76e-08!172;CL:0000094!1.61e-07!8;CL:0002032!1.97e-07!165;CL:0000837!1.97e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.19e-33;33!CL:0002057;2.19e-33;33!CL:0000473;2.65e-24;39!CL:0000234;2.65e-24;39!CL:0000576;4.26e-22;48!CL:0000766;4.82e-16;69!CL:0000094;1.05e-09;8!CL:0000763;8.53e-07;100!CL:0002087;9.99e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.84e-43,42;CL:0002057,8.84e-43,42;CL:0000473,1.61e-38,48;CL:0000234,1.61e-38,48;CL:0000766,1.09e-36,72;CL:0002009,4.35e-35,61;CL:0002194,5.79e-33,59;CL:0000576,5.79e-33,59;CL:0000040,5.79e-33,59;CL:0000559,5.79e-33,59;CL:0000557,1.03e-31,67;CL:0000839,1.41e-27,66;CL:0000738,3.26e-22,136;CL:0000763,6.83e-21,108;CL:0000049,6.83e-21,108;CL:0002087,3.28e-18,115;CL:0002031,4.55e-16,120;CL:0000037,2.49e-14,168;CL:0002032,2.69e-13,161;CL:0000837,2.69e-13,161;CL:0000988,1.61e-12,177;CL:0000094,1.05e-09,8;CL:0002393,1.21e-07,9;CL:0002397,1.21e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;5.46e-31;42!CL:0000049;9.33e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1749;1.74e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.83e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.25e-24!102;UBERON:0003061!2.25e-24!102;UBERON:0002193!1.15e-21!112;UBERON:0002371!1.20e-18!80;UBERON:0007023!3.24e-17!115;UBERON:0001474!9.75e-16!86;UBERON:0004765!1.30e-14!101;UBERON:0001434!1.30e-14!101;UBERON:0002405!7.85e-13!115;UBERON:0000178!7.97e-07!15;UBERON:0000179!7.97e-07!15;UBERON:0000463!7.97e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.96e-09;15!UBERON:0000179;1.96e-09;15!UBERON:0000463;1.96e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.89e-34,98;UBERON:0003061,8.89e-34,98;UBERON:0002193,1.15e-29,108;UBERON:0004765,3.45e-26,90;UBERON:0002371,9.78e-26,76;UBERON:0001474,1.62e-22,82;UBERON:0002405,7.67e-22,93;UBERON:0001434,1.48e-21,100;UBERON:0003081,7.71e-12,203;UBERON:0000178,1.92e-09,15;UBERON:0000179,1.92e-09,15;UBERON:0000463,1.92e-09,15;UBERON:0002204,1.14e-07,167;UBERON:0000926,4.28e-07,315;UBERON:0004120,4.28e-07,315;UBERON:0006603,4.28e-07,315 | |||
|phase1_expression=0.363356758541113,6.20891519283851,0.986680828671798,0,0.893922188854576,0,22.796989035148,0,1.30592814099919,0,0,0.655324116390517,0.263766978228454,3.58922423584135,3.97676850873499,1.34465029290355,0,0,0,0,0,0,0,0,0,0,0,0,84.9666837993633,54.5037745298042,44.896675761662,1.83884244895785,2.10844143144775,3.32778609150109,0,0,0.880801318004542,24.9297933839345,34.2931005173942,34.9387501852521,0,0,0,60.3402690935194,27.2070679455943,32.2636801379796,225.456165798514,97.8579573491945,201.618847452712,925.79411849268,390.388916750349,873.801839438322,632.953069832432,316.932979639659,560.665654500575,126.122367493545,27.8364273059003,50.1133370312539,259.865224622896,74.7764633087298,147.686876059579,212.754088620432,107.111984142816,137.244369671528,331.128741275214,121.987823308595,124.564449799115,1470.55843774772,635.687677554226,1586.34732172617,424.990450848625,278.786170442586,249.055898915976,4.85887158517466,4.03948169933583,10.2732736299104,7.30136102452218,10.5123824989054,6.42902346788321,2.56511469367124,1.59133341759272,2.73996230646951,0,0,0,2.98711155796555,0,1.72425731986345,2.64417949113945,0,0.569212969109448,1.76171156811282,1.14681968437569,1.32171328579026,13.4522055115569,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27426165729639,0,0,1.20460095262218,0,3.74792179657038,2.8413270245282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,3.40545596294053,3.27865759463288,10.7527488407485,2.59637914923747,4.35324343248168,27.655255787924,1.19245312152671,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,131.780417436063,275.323987545311,4.79703457356788,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.2249981137791,12.2735754265876,12.0457930063382,0,0,0,0.518305275076852,0.252320850875628,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.860919069801795,0,4.39001141634502,2.24803506515239,1.91005047582099,6.94413338688972,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0.234004265139238,0.148631162288728,6.56136837907439,3.02367830757947,4.53680311175637,0,0,0,0,0,0.829312462163088,0.432359860250884,0.25248486685276,0.126995788584338,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,1.77695974371273,0,0,0,0,1.2162378064119,0,4.21667878966063,0,0,0,0,0,0,0,1.77327684181734,0.215627574859517,1.66845947163673,0,0,0,0,0,46.4384354847253,62.8239064328452,113.549850681474,7.48418099486753,4.00136416847742,0,0,0,0,0,0,0,1.03473071292505,0,0.184369168541703,0,0,0,6.82334486205528,21.1399916802245,8.85838729768588,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,1.0877350463246,5.21316822788541,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.83111688522689,0,0,1.72279661398852,3.25030123018261,0,0,0,0.15350367472613,0,0.537101224341368,0.145016693914229,0.0852266274161009,0,3.96683796866347,2.11409074101617,5.48734663726712,1.0115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95719406683292,1.92175920815238,2.23843564456804,0,0,0,0.48763373908959,0,0,0,0.141405431953713,0,0,0,0,0,0.655894752046633,0,0.6196469961995,0,0,0,0,0,0,0,0,0.699869440489966,0.962221127255121,0.670302275535787,0,6.68420985515132,0.43050537267123,10.1082885400575,3.10401107475673,1.60806380144872,91.8480172710227,90.2271904428003,76.9023702685119,40.4994018278241,71.1656732439116,115.428249392304,106.386193135909,68.2087651613073,0,0,35.7758715332306,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0.425846237690326,0,0,0,0.834245708559542,0,0,0,0,0,0,0,13.0392279551986,0,0.111443384277478,0,11.9372242368845,2.96964680832639,3.37876772309155,0,0.281338832821026,0.779160935160341,0,0,3.58646378851925,2.48655523978033,0,0,0,0,0,0.179021174675609,0,2.56472854656027,23.948309234694,0,0,0.278304294485554,0,0,0,7.24999575434793,9.33106275941097,0.254253650292766,0,0.344743373241465,0,0,1.77148277162768,0,0,0,0.295547618953547,0,0,45.5915643791033,4.61701551022782,0,0.23056390438806,0.448788222048861,0.217294743844016,75.9222760161968,10.7169184280179,214.81301473551,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,2.91909962861019,2.4441205797345,0,0,0,0.269604531922708,0,0,0,50.6771363034112,0,4.73501283419269,0,0,0.189559738885464,0.150323419414493,0,0,0,0,0,0,0,0.173559738335131,31.0635899803577,2.00236175134926,1.22308667769421,0,0,0,0,13.6754513248671,0,16.0446325954178,0,0,0.0633107959558787,0,1.04206466326994,0.85381197895741,0.19980960958213,0,0,0,0,0,11.549007696223,0,0,0.101998217636322,0,0.600420288709789,0.410716136675979,6.38732940334862,0,0,7.26134243307861,2.7499250881402,0.717873024576814,1.99679000498991,0.858452096273142,0.89268582976749,0.335917362433631,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0.681017030557878,0,0,0,152.98224625502,260.771258686029,0.0607495566580247,42.9356400127061,0.236417121897595,0.577000469484979,0,0.179287339332845,0,0.714695326373367,1.32418394073086,0,0,0,0,0,0,0,0.22662418304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| ||
|short_description=p1@HCAR2 | |short_description=p1@HCAR2 | ||
}} | }} |
Latest revision as of 00:27, 17 September 2015
Short description: | p1@HCAR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HCAR2_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 0bp_to_NM_177551, uc001ucx.1_5end |
EntrezGene: | HCAR2 |
HGNC: | 24827 |
UniProt: | Q8TDS4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.84e-43 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.84e-43 | 42 |
defensive cell | 1.61e-38 | 48 |
phagocyte | 1.61e-38 | 48 |
myeloid leukocyte | 1.09e-36 | 72 |
macrophage dendritic cell progenitor | 4.35e-35 | 61 |
monopoietic cell | 5.79e-33 | 59 |
monocyte | 5.79e-33 | 59 |
monoblast | 5.79e-33 | 59 |
promonocyte | 5.79e-33 | 59 |
granulocyte monocyte progenitor cell | 1.03e-31 | 67 |
myeloid lineage restricted progenitor cell | 1.41e-27 | 66 |
leukocyte | 3.26e-22 | 136 |
myeloid cell | 6.83e-21 | 108 |
common myeloid progenitor | 6.83e-21 | 108 |
nongranular leukocyte | 3.28e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 4.55e-16 | 120 |
hematopoietic stem cell | 2.49e-14 | 168 |
hematopoietic oligopotent progenitor cell | 2.69e-13 | 161 |
hematopoietic multipotent progenitor cell | 2.69e-13 | 161 |
hematopoietic cell | 1.61e-12 | 177 |
granulocyte | 1.05e-09 | 8 |
intermediate monocyte | 1.21e-07 | 9 |
CD14-positive, CD16-positive monocyte | 1.21e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.89e-34 | 98 |
blood island | 8.89e-34 | 98 |
hemolymphoid system | 1.15e-29 | 108 |
skeletal element | 3.45e-26 | 90 |
bone marrow | 9.78e-26 | 76 |
bone element | 1.62e-22 | 82 |
immune system | 7.67e-22 | 93 |
skeletal system | 1.48e-21 | 100 |
lateral plate mesoderm | 7.71e-12 | 203 |
blood | 1.92e-09 | 15 |
haemolymphatic fluid | 1.92e-09 | 15 |
organism substance | 1.92e-09 | 15 |
musculoskeletal system | 1.14e-07 | 167 |
mesoderm | 4.28e-07 | 315 |
mesoderm-derived structure | 4.28e-07 | 315 |
presumptive mesoderm | 4.28e-07 | 315 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.83e-07 | 14 |