FFCP PHASE1:Hg19::chr17:39886117..39886121,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:39886117..39886121,- | |||
|coexpression_cluster_id=C63 | |||
|description=CAGE_peak_at_chr17:39886117..39886121,- | |description=CAGE_peak_at_chr17:39886117..39886121,- | ||
|id=chr17:39886117..39886121,- | |id=chr17:39886117..39886121,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;2.21e-15;2!CL:0002535;2.21e-15;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,2.05e-15,2 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.15e-29;1!UBERON:0003056;7.78e-11;3 | |||
|ontology_enrichment_disease=DOID:305!5.09e-17!106;DOID:0050687!1.15e-16!143;DOID:1749!9.24e-11!14;DOID:162!1.57e-09!235;DOID:171!3.28e-09!10;DOID:14566!4.09e-09!239;DOID:3119!4.57e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:4362;2.02e-23;5!DOID:171;2.31e-12;10 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,2.27e-23,5;DOID:171,2.12e-12,10 | |||
|ontology_enrichment_uberon=UBERON:0000344!2.52e-09!12;UBERON:0000073!1.13e-08!94;UBERON:0001016!1.13e-08!94;UBERON:0002020!1.84e-07!34;UBERON:0003528!1.84e-07!34;UBERON:0000924!5.33e-07!173;UBERON:0006601!5.33e-07!173;UBERON:0001017!8.38e-07!82;UBERON:0003714!8.73e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.15e-29;1!UBERON:0001785;1.15e-29;1!UBERON:0002464;1.15e-29;1!UBERON:0004904;1.15e-29;1!UBERON:0001021;1.15e-29;1!UBERON:0002346;2.94e-29;4!UBERON:0000923;2.94e-29;4!UBERON:0010316;2.94e-29;4!UBERON:0005291;2.94e-29;4!UBERON:0002050;1.21e-23;5!UBERON:0005423;1.21e-23;5!UBERON:0000002;1.04e-19;6!UBERON:0001560;1.04e-19;6!UBERON:0003714;1.43e-15;2!UBERON:0005162;1.43e-15;2!UBERON:0000122;1.43e-15;2!UBERON:0006955;2.21e-15;2!UBERON:0004801;2.21e-15;2!UBERON:0000995;1.33e-07;17!UBERON:0003975;3.14e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,9.99e-30,1;UBERON:0001785,9.99e-30,1;UBERON:0002464,9.99e-30,1;UBERON:0004904,9.99e-30,1;UBERON:0001021,9.99e-30,1;UBERON:0003902,9.99e-30,1;UBERON:0005425,9.99e-30,1;UBERON:0000002,1.15e-19,6;UBERON:0001560,1.15e-19,6;UBERON:0003714,1.33e-15,2;UBERON:0005162,1.33e-15,2;UBERON:0000122,1.33e-15,2;UBERON:0006955,2.05e-15,2;UBERON:0004801,2.05e-15,2;UBERON:0001781,1.82e-08,4 | |||
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| ||
|short_description=p@chr17:39886117..39886121,- | |short_description=p@chr17:39886117..39886121,- | ||
}} | }} |
Latest revision as of 16:48, 25 July 2015
Short description: | p@chr17:39886117..39886121, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:39886117..39886121, - |
Coexpression cluster: | C63_neuroectodermal_neuroblastoma_carcinoid_peripheral_chronic_neuroepithelioma_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 2.05e-15 | 2 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 9.99e-30 | 1 |
cranial nerve | 9.99e-30 | 1 |
nerve trunk | 9.99e-30 | 1 |
nerve connecting eye with brain | 9.99e-30 | 1 |
nerve | 9.99e-30 | 1 |
retinal neural layer | 9.99e-30 | 1 |
presumptive neural retina | 9.99e-30 | 1 |
uterine cervix | 1.15e-19 | 6 |
neck of organ | 1.15e-19 | 6 |
neural tissue | 1.33e-15 | 2 |
multi cell component structure | 1.33e-15 | 2 |
neuron projection bundle | 1.33e-15 | 2 |
uterine epithelium | 2.05e-15 | 2 |
cervix epithelium | 2.05e-15 | 2 |
layer of retina | 1.82e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 2.27e-23 | 5 |
neuroectodermal tumor | 2.12e-12 | 10 |