FFCP PHASE1:Hg19::chr12:124948217..124948234,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:124948217..124948234,- | |||
|coexpression_cluster_id=C41 | |||
|description=CAGE_peak_at_chr12:124948217..124948234,- | |description=CAGE_peak_at_chr12:124948217..124948234,- | ||
|id=chr12:124948217..124948234,- | |id=chr12:124948217..124948234,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;6.76e-18;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!6.27e-32!2;UBERON:0002757!6.27e-32!2;UBERON:0010134!6.27e-32!2;UBERON:0002784!6.27e-32!2;UBERON:0005408!6.27e-32!2;UBERON:0001899!6.27e-32!2;UBERON:0001301!1.41e-16!1;UBERON:0003296!1.66e-16!4;UBERON:0010133!1.66e-16!4;UBERON:0000966!2.52e-13!5;UBERON:0005388!2.52e-13!5;UBERON:0001802!2.52e-13!5;UBERON:0001894!7.64e-10!7;UBERON:0006222!7.64e-10!7;UBERON:0002360!5.49e-09!2;UBERON:0000094!5.49e-09!2;UBERON:0007645!5.49e-09!2;UBERON:0000970!1.42e-07!20;UBERON:0002104!3.07e-07!21 | |ontology_enrichment_uberon=UBERON:0001905!6.27e-32!2;UBERON:0002757!6.27e-32!2;UBERON:0010134!6.27e-32!2;UBERON:0002784!6.27e-32!2;UBERON:0005408!6.27e-32!2;UBERON:0001899!6.27e-32!2;UBERON:0001301!1.41e-16!1;UBERON:0003296!1.66e-16!4;UBERON:0010133!1.66e-16!4;UBERON:0000966!2.52e-13!5;UBERON:0005388!2.52e-13!5;UBERON:0001802!2.52e-13!5;UBERON:0001894!7.64e-10!7;UBERON:0006222!7.64e-10!7;UBERON:0002360!5.49e-09!2;UBERON:0000094!5.49e-09!2;UBERON:0007645!5.49e-09!2;UBERON:0000970!1.42e-07!20;UBERON:0002104!3.07e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;4.22e-98;2!UBERON:0002757;4.22e-98;2!UBERON:0010134;4.22e-98;2!UBERON:0005408;4.22e-98;2!UBERON:0001899;4.22e-98;2!UBERON:0003296;8.47e-50;4!UBERON:0010133;8.47e-50;4!UBERON:0002784;8.47e-50;4!UBERON:0001894;4.86e-29;7!UBERON:0000966;2.66e-11;5!UBERON:0005388;2.66e-11;5!UBERON:0001802;2.66e-11;5!UBERON:0000970;5.16e-11;20!UBERON:0002104;1.53e-10;21!UBERON:0000020;1.02e-09;23!UBERON:0001032;2.35e-09;24!UBERON:0004456;2.35e-09;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,4.22e-98,2;UBERON:0002757,4.22e-98,2;UBERON:0010134,4.22e-98,2;UBERON:0005408,4.22e-98,2;UBERON:0001899,4.22e-98,2;UBERON:0003296,8.47e-50,4;UBERON:0010133,8.47e-50,4;UBERON:0002784,8.47e-50,4;UBERON:0001894,4.86e-29,7;UBERON:0006222,4.86e-29,7;UBERON:0000970,1.53e-10,21;UBERON:0002104,1.53e-10,21;UBERON:0000966,1.22e-09,6;UBERON:0005388,1.22e-09,6;UBERON:0001802,1.22e-09,6;UBERON:0000020,2.35e-09,24;UBERON:0001032,2.35e-09,24;UBERON:0004456,2.35e-09,24;UBERON:0003056,4.50e-08,61 | |||
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|short_description=p@chr12:124948217..124948234,- | |short_description=p@chr12:124948217..124948234,- | ||
}} | }} |
Latest revision as of 06:24, 24 July 2015
Short description: | p@chr12:124948217..124948234, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:124948217..124948234, - |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 4.22e-98 | 2 |
regional part of epithalamus | 4.22e-98 | 2 |
secretory circumventricular organ | 4.22e-98 | 2 |
circumventricular organ | 4.22e-98 | 2 |
epithalamus | 4.22e-98 | 2 |
gland of diencephalon | 8.47e-50 | 4 |
neuroendocrine gland | 8.47e-50 | 4 |
regional part of diencephalon | 8.47e-50 | 4 |
diencephalon | 4.86e-29 | 7 |
future diencephalon | 4.86e-29 | 7 |
eye | 1.53e-10 | 21 |
visual system | 1.53e-10 | 21 |
retina | 1.22e-09 | 6 |
photoreceptor array | 1.22e-09 | 6 |
posterior segment of eyeball | 1.22e-09 | 6 |
sense organ | 2.35e-09 | 24 |
sensory system | 2.35e-09 | 24 |
entire sense organ system | 2.35e-09 | 24 |
pre-chordal neural plate | 4.50e-08 | 61 |