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FFCP PHASE1:Hg19::chr12:48151938..48151973,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=10411
|EntrezGene=10411
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=16629
|HGNC=16629
|TSSclassifier=strong
|UniProt=F8VXK1
|UniProt=F8VXK1
|association_with_transcript=0bp_to_ENST00000495953,ENST00000549347_5end
|association_with_transcript=0bp_to_ENST00000495953,ENST00000549347_5end
|cluster_id=chr12:48151938..48151973,-
|description=CAGE_peak_3_at_RAPGEF3_5end
|description=CAGE_peak_3_at_RAPGEF3_5end
|id=chr12:48151938..48151973,-
|id=chr12:48151938..48151973,-
|ontology_enrichment_celltype=CL:0002139!6.29e-14!24;CL:0000115!8.82e-12!35;CL:0000071!2.71e-11!18;CL:0002546!2.71e-11!18;CL:0002078!1.85e-10!44;CL:1000413!1.51e-07!9
|ontology_enrichment_celltype=CL:0002139!6.29e-14!24;CL:0000115!8.82e-12!35;CL:0000071!2.71e-11!18;CL:0002546!2.71e-11!18;CL:0002078!1.85e-10!44;CL:1000413!1.51e-07!9
|ontology_enrichment_celltype_v019=CL:0002139;9.36e-12;24!CL:0000115;4.49e-10;36!CL:0000071;4.89e-10;18!CL:0002543;3.83e-09;6
|ontology_enrichment_celltype_v019_2=CL:0002139,5.60e-12,24;CL:0000115,1.63e-11,36;CL:0000071,2.32e-10,18;CL:0002546,2.32e-10,18;CL:0002543,1.28e-09,6;CL:0002078,2.47e-09,45
|ontology_enrichment_development_v019=CL:0002546;4.89e-10;18!UBERON:0006601;6.23e-08;82
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007023!2.45e-68!115;UBERON:0001049!6.63e-33!57;UBERON:0005068!6.63e-33!57;UBERON:0006241!6.63e-33!57;UBERON:0007135!6.63e-33!57;UBERON:0003075!4.25e-28!86;UBERON:0007284!4.25e-28!86;UBERON:0002616!5.67e-28!59;UBERON:0002346!6.96e-26!90;UBERON:0003080!1.54e-24!42;UBERON:0000955!1.42e-23!69;UBERON:0006238!1.42e-23!69;UBERON:0002780!1.73e-23!41;UBERON:0001890!1.73e-23!41;UBERON:0006240!1.73e-23!41;UBERON:0001017!3.04e-23!82;UBERON:0004111!5.53e-23!241;UBERON:0000477!8.46e-23!286;UBERON:0005743!2.14e-22!86;UBERON:0000025!3.39e-22!194;UBERON:0002020!2.66e-20!34;UBERON:0003528!2.66e-20!34;UBERON:0001893!4.21e-20!34;UBERON:0002791!2.11e-19!33;UBERON:0000073!1.73e-18!94;UBERON:0001016!1.73e-18!94;UBERON:0001869!1.96e-18!32;UBERON:0003056!2.90e-18!61;UBERON:0002619!7.36e-16!22;UBERON:0000153!8.62e-16!129;UBERON:0007811!8.62e-16!129;UBERON:0000119!9.41e-15!312;UBERON:0000033!1.55e-14!123;UBERON:0000483!2.04e-14!309;UBERON:0001950!7.53e-14!20;UBERON:0000956!3.71e-13!25;UBERON:0000203!3.71e-13!25;UBERON:0004121!4.20e-12!169;UBERON:0000924!2.40e-11!173;UBERON:0006601!2.40e-11!173;UBERON:0001986!2.71e-11!18;UBERON:0004638!2.71e-11!18;UBERON:0004852!2.71e-11!18;UBERON:0000064!4.72e-11!219;UBERON:0000467!5.86e-11!625;UBERON:0000480!7.41e-11!626;UBERON:0000468!1.43e-10!659;UBERON:0003103!5.57e-10!69;UBERON:0003076!2.06e-09!15;UBERON:0003057!2.06e-09!15;UBERON:0000487!2.59e-09!22;UBERON:0000922!3.44e-09!612;UBERON:0000062!3.84e-09!511;UBERON:0002308!5.39e-09!9;UBERON:0000125!5.39e-09!9;UBERON:0002050!9.00e-09!605;UBERON:0005423!9.00e-09!605;UBERON:0006914!1.31e-08!25;UBERON:0002420!1.49e-08!9;UBERON:0007245!1.49e-08!9;UBERON:0010009!1.49e-08!9;UBERON:0010011!1.49e-08!9;UBERON:0000454!1.49e-08!9;UBERON:0000481!1.76e-08!347;UBERON:0000923!1.84e-08!604;UBERON:0005291!1.84e-08!604;UBERON:0006598!1.84e-08!604;UBERON:0002532!1.84e-08!604;UBERON:0002298!7.39e-08!8;UBERON:0001871!1.04e-07!7;UBERON:0003915!1.51e-07!9;UBERON:0004700!1.51e-07!9;UBERON:0001917!1.51e-07!9;UBERON:0004733!1.66e-07!12;UBERON:0002028!1.66e-07!12;UBERON:0007277!1.66e-07!12;UBERON:0003887!2.15e-07!21;UBERON:0009663!3.68e-07!7;UBERON:0000489!6.93e-07!32
|ontology_enrichment_uberon_v019=UBERON:0001893;5.72e-19;34!UBERON:0003528;9.49e-19;34!UBERON:0002020;9.49e-19;34!UBERON:0002780;7.32e-18;41!UBERON:0001890;7.32e-18;41!UBERON:0007023;7.78e-18;114!UBERON:0002791;9.65e-18;32!UBERON:0001869;1.10e-17;32!UBERON:0002619;1.46e-16;22!UBERON:0000073;3.23e-15;53!UBERON:0002616;3.23e-15;53!UBERON:0000956;4.37e-14;25!UBERON:0000203;4.37e-14;25!UBERON:0001950;9.38e-14;20!UBERON:0000125;7.33e-11;9!UBERON:0002308;7.33e-11;9!UBERON:0004638;4.89e-10;18!UBERON:0001986;4.89e-10;18!UBERON:0004852;4.89e-10;18!UBERON:0000955;2.55e-09;68!UBERON:0001017;1.56e-08;75!UBERON:0001638;3.83e-08;9!UBERON:0003920;3.83e-08;9!UBERON:0004582;3.83e-08;9!UBERON:0009663;4.54e-08;7!UBERON:0002420;5.20e-08;9!UBERON:0007245;5.20e-08;9!UBERON:0010009;5.20e-08;9!UBERON:0010011;5.20e-08;9!UBERON:0000454;5.20e-08;9!UBERON:0000487;1.06e-07;22!UBERON:0000200;5.68e-07;6!UBERON:0001016;5.90e-07;83
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.86e-70,114;UBERON:0001049,2.21e-28,56;UBERON:0005068,2.21e-28,56;UBERON:0006241,2.21e-28,56;UBERON:0007135,2.21e-28,56;UBERON:0000073,4.43e-27,53;UBERON:0002616,4.43e-27,53;UBERON:0002780,5.03e-25,41;UBERON:0001890,5.03e-25,41;UBERON:0003080,5.03e-25,41;UBERON:0006240,5.03e-25,41;UBERON:0003528,4.80e-23,34;UBERON:0002020,4.80e-23,34;UBERON:0001893,8.90e-23,34;UBERON:0003075,2.05e-22,82;UBERON:0007284,2.05e-22,82;UBERON:0000955,2.45e-21,68;UBERON:0006238,2.45e-21,68;UBERON:0004111,6.72e-21,240;UBERON:0002346,8.31e-21,86;UBERON:0002791,1.74e-20,32;UBERON:0001869,2.36e-20,32;UBERON:0001017,8.80e-20,81;UBERON:0000025,1.77e-19,192;UBERON:0010371,4.72e-17,104;UBERON:0010314,5.97e-17,132;UBERON:0002619,7.54e-17,22;UBERON:0001016,1.05e-16,89;UBERON:0003056,2.01e-16,61;UBERON:0000956,2.47e-14,25;UBERON:0000203,2.47e-14,25;UBERON:0001950,5.33e-14,20;UBERON:0000483,9.87e-12,306;UBERON:0000119,1.97e-11,309;UBERON:0000125,8.40e-11,9;UBERON:0002308,8.40e-11,9;UBERON:0004638,2.32e-10,18;UBERON:0001986,2.32e-10,18;UBERON:0004852,2.32e-10,18;UBERON:0004121,6.19e-10,171;UBERON:0000924,6.19e-10,171;UBERON:0006601,6.19e-10,171;UBERON:0011216,5.33e-09,223;UBERON:0001638,1.69e-08,9;UBERON:0003920,1.69e-08,9;UBERON:0004582,1.69e-08,9;UBERON:0002420,4.06e-08,9;UBERON:0007245,4.06e-08,9;UBERON:0010009,4.06e-08,9;UBERON:0010011,4.06e-08,9;UBERON:0000454,4.06e-08,9;UBERON:0009663,5.13e-08,7;UBERON:0000487,5.96e-08,22;UBERON:0003887,8.13e-08,12;UBERON:0000200,5.08e-07,6;UBERON:0005423,5.88e-07,581;UBERON:0003103,8.80e-07,68
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|short_description=p3@RAPGEF3
|short_description=p3@RAPGEF3
}}
}}

Latest revision as of 13:02, 18 September 2015

Short description:p3@RAPGEF3
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_3_at_RAPGEF3_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENST00000495953, ENST00000549347_5end
EntrezGene:RAPGEF3
HGNC: 16629
UniProt: F8VXK1
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data