FFCP PHASE1:Hg19::chr12:52487297..52487308,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-44bp_to_ENST00000546981_5end | |association_with_transcript=-44bp_to_ENST00000546981_5end | ||
|cluster_id=chr12:52487297..52487308,+ | |||
|coexpression_cluster_id=C2147 | |||
|description=CAGE_peak_1_at_ENST00000546981_5end | |description=CAGE_peak_1_at_ENST00000546981_5end | ||
|id=chr12:52487297..52487308,+ | |id=chr12:52487297..52487308,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002535;2.12e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,2.23e-11,2 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.35e-17;29!UBERON:0006965;3.18e-11;2 | |||
|ontology_enrichment_disease=DOID:0050619!2.82e-09!1;DOID:1357!2.82e-09!1 | |ontology_enrichment_disease=DOID:0050619!2.82e-09!1;DOID:1357!2.82e-09!1 | ||
|ontology_enrichment_disease_v019=DOID:0050619;7.72e-21;1!DOID:1357;7.72e-21;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,6.31e-21,1;DOID:1357,6.31e-21,1 | |||
|ontology_enrichment_uberon=UBERON:0003127!4.91e-17!2;UBERON:0007023!3.93e-12!115;UBERON:0001764!2.82e-09!1;UBERON:0001825!2.82e-09!1;UBERON:0002171!3.31e-09!1;UBERON:0006518!3.31e-09!1;UBERON:0008949!3.31e-09!1;UBERON:0000101!3.31e-09!1;UBERON:0002167!3.31e-09!1;UBERON:0001301!6.72e-09!1;UBERON:0006834!7.85e-09!1;UBERON:0002372!9.91e-09!1;UBERON:0001961!9.91e-09!1;UBERON:0001744!9.91e-09!1;UBERON:0001735!9.91e-09!1;UBERON:0001882!1.07e-08!1;UBERON:0005403!1.07e-08!1;UBERON:0000464!3.45e-07!104;UBERON:0000466!9.23e-07!126 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;1.64e-40;2!UBERON:0002171;7.72e-21;1!UBERON:0001764;7.72e-21;1!UBERON:0001825;7.72e-21;1!UBERON:0006518;7.72e-21;1!UBERON:0008949;7.72e-21;1!UBERON:0000101;7.72e-21;1!UBERON:0002167;7.72e-21;1!UBERON:0003126;2.37e-12;7!UBERON:0001005;2.37e-12;7!UBERON:0005178;9.13e-12;34!UBERON:0002224;9.13e-12;34!UBERON:0006955;2.12e-11;2!UBERON:0004801;2.12e-11;2!UBERON:0000341;2.73e-11;2!UBERON:0005181;3.56e-10;35!UBERON:0000065;7.18e-09;44!UBERON:0002048;9.81e-09;22!UBERON:0000117;9.81e-09;22!UBERON:0000171;9.81e-09;22!UBERON:0000170;9.81e-09;22!UBERON:0001004;8.03e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,1.64e-40,2;UBERON:0001764,6.31e-21,1;UBERON:0001825,6.31e-21,1;UBERON:0002171,9.43e-21,1;UBERON:0006518,9.43e-21,1;UBERON:0008949,9.43e-21,1;UBERON:0000101,9.43e-21,1;UBERON:0002167,9.43e-21,1;UBERON:0005178,1.08e-14,34;UBERON:0002224,1.08e-14,34;UBERON:0005181,2.80e-14,35;UBERON:0008947,3.64e-13,38;UBERON:0003258,3.64e-13,38;UBERON:0003126,2.37e-12,7;UBERON:0001005,2.37e-12,7;UBERON:0006955,2.23e-11,2;UBERON:0004801,2.23e-11,2;UBERON:0000341,2.73e-11,2;UBERON:0000915,1.18e-09,52;UBERON:0001004,1.50e-09,74;UBERON:0000065,2.67e-09,54;UBERON:0002048,9.94e-09,22;UBERON:0000117,9.94e-09,22;UBERON:0000171,9.94e-09,22;UBERON:0000170,9.94e-09,22;UBERON:0005597,9.94e-09,22;UBERON:0000118,9.94e-09,22 | |||
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|short_description=p1@ENST00000546981 | |short_description=p1@ENST00000546981 | ||
}} | }} |
Latest revision as of 09:28, 24 July 2015
Short description: | p1@ENST00000546981 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000546981_5end |
Coexpression cluster: | C2147_argyrophil_lung_trachea_gastrointestinal_throat_caudate_aorta |
Association with transcript: | -44bp_to_ENST00000546981_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 2.23e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 1.64e-40 | 2 |
maxillary sinus | 6.31e-21 | 1 |
paranasal sinus | 6.31e-21 | 1 |
lower lobe of right lung | 9.43e-21 | 1 |
right lung lobe | 9.43e-21 | 1 |
lower lobe of lung | 9.43e-21 | 1 |
lobe of lung | 9.43e-21 | 1 |
right lung | 9.43e-21 | 1 |
thoracic cavity element | 1.08e-14 | 34 |
thoracic cavity | 1.08e-14 | 34 |
thoracic segment organ | 2.80e-14 | 35 |
respiratory primordium | 3.64e-13 | 38 |
endoderm of foregut | 3.64e-13 | 38 |
trachea | 2.37e-12 | 7 |
respiratory airway | 2.37e-12 | 7 |
uterine epithelium | 2.23e-11 | 2 |
cervix epithelium | 2.23e-11 | 2 |
throat | 2.73e-11 | 2 |
thoracic segment of trunk | 1.18e-09 | 52 |
respiratory system | 1.50e-09 | 74 |
respiratory tract | 2.67e-09 | 54 |
lung | 9.94e-09 | 22 |
respiratory tube | 9.94e-09 | 22 |
respiration organ | 9.94e-09 | 22 |
pair of lungs | 9.94e-09 | 22 |
lung primordium | 9.94e-09 | 22 |
lung bud | 9.94e-09 | 22 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 6.31e-21 | 1 |
maxillary sinus cancer | 6.31e-21 | 1 |