FFCP PHASE1:Hg19::chr10:97182014..97182028,-: Difference between revisions
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|id=chr10:97182014..97182028,-
|short_description=p17@SORBS1
|description=CAGE_peak_17_at_SORBS1_5end
|association_with_transcript=-184bp_to_uc001kkl.2_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10580 | |EntrezGene=10580 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14565 | |HGNC=14565 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-184bp_to_uc001kkl.2_5end | |||
|cluster_id=chr10:97182014..97182028,- | |||
|coexpression_cluster_id=C2085 | |||
|description=CAGE_peak_17_at_SORBS1_5end | |||
|id=chr10:97182014..97182028,- | |||
|ontology_enrichment_celltype=CL:0000148!5.11e-13!10;CL:0000541!5.11e-13!10;CL:0002567!3.71e-09!3;CL:0000147!6.43e-09!14 | |||
|ontology_enrichment_celltype_v019=CL:0000148;3.27e-51;10!CL:0000147;1.90e-36;14!CL:0002567;2.16e-32;3!CL:0000710;2.35e-25;20!CL:0000075;1.25e-18;27!CL:0002077;4.82e-13;34!CL:0002566;1.07e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,3.41e-51,10;CL:0000541,3.41e-51,10;CL:0000147,1.96e-36,14;CL:0002567,2.68e-32,3;CL:0000710,2.40e-25,20;CL:0000075,1.27e-18,27;CL:0002077,1.16e-14,34;CL:0002566,7.76e-12,1;CL:0000333,1.87e-11,41;CL:0000133,7.19e-08,59 | |||
|ontology_enrichment_development_v019=UBERON:0006241;9.29e-15;3!UBERON:0003057;9.29e-15;3!UBERON:0010227;3.85e-12;1!UBERON:0001045;1.07e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:1909,9.96e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.09e-43!115;UBERON:0001049!5.35e-13!57;UBERON:0005068!5.35e-13!57;UBERON:0006241!5.35e-13!57;UBERON:0007135!5.35e-13!57;UBERON:0003075!5.14e-12!86;UBERON:0007284!5.14e-12!86;UBERON:0002346!3.41e-11!90;UBERON:0005743!1.36e-10!86;UBERON:0001017!3.38e-10!82;UBERON:0003076!1.13e-09!15;UBERON:0003057!1.13e-09!15;UBERON:0000073!4.91e-09!94;UBERON:0001016!4.91e-09!94;UBERON:0002240!7.12e-09!3;UBERON:0002616!2.11e-08!59;UBERON:0001896!3.07e-08!3;UBERON:0005290!3.07e-08!3;UBERON:0010096!3.07e-08!3;UBERON:0002298!1.04e-07!8;UBERON:0004121!1.53e-07!169;UBERON:0000924!3.41e-07!173;UBERON:0006601!3.41e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0002240;9.29e-15;3!UBERON:0005174;9.29e-15;3!UBERON:0001137;9.29e-15;3!UBERON:0002079;3.85e-12;1!UBERON:0007029;1.07e-11;1!UBERON:0002038;1.07e-11;1!UBERON:0001154;1.07e-11;1!UBERON:0001153;1.07e-11;1!UBERON:0009854;1.07e-11;1!UBERON:0009661;1.07e-11;1!UBERON:0002950;1.07e-11;1!UBERON:0001891;1.07e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,8.67e-15,3;UBERON:0005174,8.67e-15,3;UBERON:0001137,8.67e-15,3;UBERON:0002079,2.63e-12,1;UBERON:0007029,6.26e-12,1;UBERON:0002038,1.19e-11,1;UBERON:0009661,1.19e-11,1;UBERON:0002950,1.19e-11,1;UBERON:0001891,1.19e-11,1;UBERON:0009616,1.19e-11,1;UBERON:0010286,1.19e-11,1;UBERON:0001154,1.81e-11,1;UBERON:0001153,1.81e-11,1;UBERON:0001045,1.81e-11,1;UBERON:0002081,8.93e-07,2;UBERON:0010227,8.93e-07,2 | |||
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| ||
|short_description=p17@SORBS1 | |||
}} | }} |
Latest revision as of 03:37, 20 September 2015
Short description: | p17@SORBS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_SORBS1_5end |
Coexpression cluster: | C2085_Melanocyte_melanoma_retina_substantia_spinal_left_vagina |
Association with transcript: | -184bp_to_uc001kkl.2_5end |
EntrezGene: | SORBS1 |
HGNC: | 14565 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 3.41e-51 | 10 |
melanoblast | 3.41e-51 | 10 |
pigment cell | 1.96e-36 | 14 |
light melanocyte | 2.68e-32 | 3 |
neurecto-epithelial cell | 2.40e-25 | 20 |
columnar/cuboidal epithelial cell | 1.27e-18 | 27 |
ecto-epithelial cell | 1.16e-14 | 34 |
dark melanocyte | 7.76e-12 | 1 |
migratory neural crest cell | 1.87e-11 | 41 |
neurectodermal cell | 7.19e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 8.67e-15 | 3 |
dorsal region element | 8.67e-15 | 3 |
dorsum | 8.67e-15 | 3 |
left cardiac atrium | 2.63e-12 | 1 |
surface | 6.26e-12 | 1 |
substantia nigra | 1.19e-11 | 1 |
midbrain nucleus | 1.19e-11 | 1 |
regional part of midbrain | 1.19e-11 | 1 |
midbrain | 1.19e-11 | 1 |
presumptive midbrain | 1.19e-11 | 1 |
midbrain neural tube | 1.19e-11 | 1 |
vermiform appendix | 1.81e-11 | 1 |
caecum | 1.81e-11 | 1 |
midgut | 1.81e-11 | 1 |
cardiac atrium | 8.93e-07 | 2 |
future cardiac atrium | 8.93e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
melanoma | 9.96e-07 | 2 |