FFCP PHASE1:Hg19::chr12:6570357..6570396,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55080 | |EntrezGene=55080 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30683 | |HGNC=30683 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=156bp_to_ENST00000544289_5end | |association_with_transcript=156bp_to_ENST00000544289_5end | ||
|cluster_id=chr12:6570357..6570396,+ | |||
|description=CAGE_peak_6_at_TAPBPL_5end | |description=CAGE_peak_6_at_TAPBPL_5end | ||
|id=chr12:6570357..6570396,+ | |id=chr12:6570357..6570396,+ | ||
|ontology_enrichment_celltype=CL:0000542!8.82e-34!53;CL:0000051!8.82e-34!53;CL:0000838!1.47e-32!52;CL:0000791!1.97e-24!18;CL:0000789!1.97e-24!18;CL:0002420!1.97e-24!18;CL:0002419!1.97e-24!18;CL:0000790!1.97e-24!18;CL:0000738!3.27e-21!140;CL:0000084!4.09e-21!25;CL:0000827!4.09e-21!25;CL:0000625!3.64e-20!11;CL:0000037!7.04e-19!172;CL:0000566!7.04e-19!172;CL:0002087!5.60e-18!119;CL:0000988!5.73e-17!182;CL:0002032!1.23e-14!165;CL:0000837!1.23e-14!165;CL:0002031!5.95e-13!124;CL:0000945!8.55e-10!24;CL:0000826!8.55e-10!24 | |ontology_enrichment_celltype=CL:0000542!8.82e-34!53;CL:0000051!8.82e-34!53;CL:0000838!1.47e-32!52;CL:0000791!1.97e-24!18;CL:0000789!1.97e-24!18;CL:0002420!1.97e-24!18;CL:0002419!1.97e-24!18;CL:0000790!1.97e-24!18;CL:0000738!3.27e-21!140;CL:0000084!4.09e-21!25;CL:0000827!4.09e-21!25;CL:0000625!3.64e-20!11;CL:0000037!7.04e-19!172;CL:0000566!7.04e-19!172;CL:0002087!5.60e-18!119;CL:0000988!5.73e-17!182;CL:0002032!1.23e-14!165;CL:0000837!1.23e-14!165;CL:0002031!5.95e-13!124;CL:0000945!8.55e-10!24;CL:0000826!8.55e-10!24 | ||
|ontology_enrichment_celltype_v019=CL:0000625;8.65e-33;11!CL:0000791;2.59e-29;18!CL:0000789;2.59e-29;18!CL:0002419;2.59e-29;18!CL:0000084;1.10e-24;25!CL:0000542;2.37e-13;53!CL:0000767;4.19e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,2.24e-33,11;CL:0000791,1.15e-29,18;CL:0000789,1.15e-29,18;CL:0002420,1.15e-29,18;CL:0002419,1.15e-29,18;CL:0000790,1.15e-29,18;CL:0000838,3.58e-25,52;CL:0000084,5.78e-25,25;CL:0000827,5.78e-25,25;CL:0000542,1.28e-24,53;CL:0000051,1.28e-24,53;CL:0000738,9.95e-13,136;CL:0002087,3.18e-10,115;CL:0000037,2.35e-09,168;CL:0000988,1.25e-08,177;CL:0002031,1.62e-08,120;CL:0002032,5.05e-07,161;CL:0000837,5.05e-07,161;CL:0000767,7.53e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;2.59e-29;18!CL:0000051;2.37e-13;53 | |||
|ontology_enrichment_disease=DOID:0060058!4.12e-08!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!5.57e-13!7;UBERON:0002370!9.67e-09!4;UBERON:0005058!9.67e-09!4;UBERON:0009113!9.67e-09!4;UBERON:0003295!9.67e-09!4;UBERON:0005562!9.67e-09!4;UBERON:0006562!2.55e-07!11 | |ontology_enrichment_uberon=UBERON:0004177!5.57e-13!7;UBERON:0002370!9.67e-09!4;UBERON:0005058!9.67e-09!4;UBERON:0009113!9.67e-09!4;UBERON:0003295!9.67e-09!4;UBERON:0005562!9.67e-09!4;UBERON:0006562!2.55e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.89e-11;2!UBERON:0005058;2.89e-11;2!UBERON:0009113;2.89e-11;2!UBERON:0004177;8.02e-10;5!UBERON:0005057;8.02e-10;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.57e-12,4;UBERON:0005058,4.57e-12,4;UBERON:0009113,4.57e-12,4;UBERON:0003295,4.57e-12,4;UBERON:0005562,4.57e-12,4;UBERON:0004177,7.01e-12,7;UBERON:0005057,7.01e-12,7;UBERON:0003351,3.53e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,1.60468152070698,1.80621296789881,1.65292640758726,1.18009283054671,1.15148819429164,0.154816123316076,0,0,0,0.154934401160603,1.13735385989937,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0.224723484445085,0.306083892370903,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0.637812899895131,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0.800791974072025,0,1.32208974556972,0,0,0,0,0,1.12101712596307,0,1.180258620683,0,0.616804496998528,1.5046784585161,0,0.946895611469467,0,1.78256731016278,0.883817722424512,1.77227115666897,1.08321545506006,1.66518715643378,1.1705341280389,1.97325485524411,1.10540007114339,2.89803085735052,1.77943875794473,1.87278579662799,2.09071047609954,2.26618685395132,2.29932296161153,1.37450978193052,2.02415753615602,1.59282707162048,1.30216690771284,1.90090408889675,1.80690142893327,1.66382594500744,1.24930726552346,2.60454977248419,1.64225599384209,1.61285394579786,0.267440195783507,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28797964312051,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560425719967636,0.591092280605782,0.431255149719035,0.513372145118994,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,0.647142602455851,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,1.23408681925858,0.648473311192717,0,0,0,0,0,0.371606350251437,0,0.853702120180969,0,0,0,0.635020748171649,0,0,0.456469358066384,0.156679895773023,0,0,0.481764225311099,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0.276283915531148,0,0,0.123084805461069,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08773192782946,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0.234264445725339,0.91227394607833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0.429765441419957,0,0,0.687481272035051,0,0,0,0,0.268733889946905,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0.790446527591777,0.487170393523584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0.485710993059139,0,0,0,0,0,0,0.231522474323834,0.437119121007915,0,0,0,0.196308467114945,0,0,0,0.187967835959707,0.257831551894309,7.69546900621953,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714193294391221,3.10026767212829,4.03485642923076,0,0,0,0.217716747896961,0,0.404112318087525,0.215166616178029,0,0,0,0,0,0,0,0.406896178315738,0,0.201273793591026,1.28227396921293 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,1.60468152070698,1.80621296789881,1.65292640758726,1.18009283054671,1.15148819429164,0.154816123316076,0,0,0,0.154934401160603,1.13735385989937,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0.224723484445085,0.306083892370903,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0.637812899895131,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0.800791974072025,0,1.32208974556972,0,0,0,0,0,1.12101712596307,0,1.180258620683,0,0.616804496998528,1.5046784585161,0,0.946895611469467,0,1.78256731016278,0.883817722424512,1.77227115666897,1.08321545506006,1.66518715643378,1.1705341280389,1.97325485524411,1.10540007114339,2.89803085735052,1.77943875794473,1.87278579662799,2.09071047609954,2.26618685395132,2.29932296161153,1.37450978193052,2.02415753615602,1.59282707162048,1.30216690771284,1.90090408889675,1.80690142893327,1.66382594500744,1.24930726552346,2.60454977248419,1.64225599384209,1.61285394579786,0.267440195783507,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28797964312051,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560425719967636,0.591092280605782,0.431255149719035,0.513372145118994,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,0.647142602455851,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,1.23408681925858,0.648473311192717,0,0,0,0,0,0.371606350251437,0,0.853702120180969,0,0,0,0.635020748171649,0,0,0.456469358066384,0.156679895773023,0,0,0.481764225311099,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0.276283915531148,0,0,0.123084805461069,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08773192782946,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0.234264445725339,0.91227394607833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0.429765441419957,0,0,0.687481272035051,0,0,0,0,0.268733889946905,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0.790446527591777,0.487170393523584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0.485710993059139,0,0,0,0,0,0,0.231522474323834,0.437119121007915,0,0,0,0.196308467114945,0,0,0,0.187967835959707,0.257831551894309,7.69546900621953,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714193294391221,3.10026767212829,4.03485642923076,0,0,0,0.217716747896961,0,0.404112318087525,0.215166616178029,0,0,0,0,0,0,0,0.406896178315738,0,0.201273793591026,1.28227396921293 | ||
|short_description=p6@TAPBPL | |short_description=p6@TAPBPL | ||
}} | }} |
Latest revision as of 22:31, 19 September 2015
Short description: | p6@TAPBPL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TAPBPL_5end |
Coexpression cluster: | NA |
Association with transcript: | 156bp_to_ENST00000544289_5end |
EntrezGene: | TAPBPL |
HGNC: | 30683 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 2.24e-33 | 11 |
mature alpha-beta T cell | 1.15e-29 | 18 |
alpha-beta T cell | 1.15e-29 | 18 |
immature T cell | 1.15e-29 | 18 |
mature T cell | 1.15e-29 | 18 |
immature alpha-beta T cell | 1.15e-29 | 18 |
lymphoid lineage restricted progenitor cell | 3.58e-25 | 52 |
T cell | 5.78e-25 | 25 |
pro-T cell | 5.78e-25 | 25 |
lymphocyte | 1.28e-24 | 53 |
common lymphoid progenitor | 1.28e-24 | 53 |
leukocyte | 9.95e-13 | 136 |
nongranular leukocyte | 3.18e-10 | 115 |
hematopoietic stem cell | 2.35e-09 | 168 |
hematopoietic cell | 1.25e-08 | 177 |
hematopoietic lineage restricted progenitor cell | 1.62e-08 | 120 |
hematopoietic oligopotent progenitor cell | 5.05e-07 | 161 |
hematopoietic multipotent progenitor cell | 5.05e-07 | 161 |
basophil | 7.53e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
thymus | 4.57e-12 | 4 |
hemolymphoid system gland | 4.57e-12 | 4 |
thymic region | 4.57e-12 | 4 |
pharyngeal gland | 4.57e-12 | 4 |
thymus primordium | 4.57e-12 | 4 |
hemopoietic organ | 7.01e-12 | 7 |
immune organ | 7.01e-12 | 7 |
pharyngeal epithelium | 3.53e-08 | 6 |