FFCP PHASE1:Hg19::chr18:20453030..20453036,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:20453030..20453036,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr18:20453030..20453036,- | |description=CAGE_peak_at_chr18:20453030..20453036,- | ||
|id=chr18:20453030..20453036,- | |id=chr18:20453030..20453036,- | ||
|ontology_enrichment_celltype=CL:0000542!1.19e-09!53;CL:0000051!1.19e-09!53;CL:0000838!6.85e-09!52 | |ontology_enrichment_celltype=CL:0000542!1.19e-09!53;CL:0000051!1.19e-09!53;CL:0000838!6.85e-09!52 | ||
|ontology_enrichment_celltype_v019=CL:0000182;7.87e-11;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.88e-11,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002368!2.20e-07!35;UBERON:0005057!6.56e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.06e-17;19!UBERON:0006925;1.06e-17;19!UBERON:0006834;2.41e-14;1!UBERON:0002423;1.86e-13;25!UBERON:0002331;1.18e-12;10!UBERON:0002365;7.71e-11;31!UBERON:0002330;7.71e-11;31!UBERON:0002368;2.06e-09;33!UBERON:0000178;1.27e-08;15!UBERON:0000179;1.27e-08;15!UBERON:0000463;1.27e-08;15!UBERON:0005172;5.57e-07;52!UBERON:0005173;5.57e-07;52!UBERON:0000949;6.07e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.13e-17,19;UBERON:0006925,1.13e-17,19;UBERON:0008836,1.13e-17,19;UBERON:0008835,2.89e-15,22;UBERON:0003894,2.89e-15,22;UBERON:0009854,1.33e-14,23;UBERON:0006834,2.11e-14,1;UBERON:0007499,1.96e-13,25;UBERON:0009497,1.96e-13,25;UBERON:0000015,1.96e-13,25;UBERON:0002423,1.96e-13,25;UBERON:0006235,1.96e-13,25;UBERON:0004161,1.96e-13,25;UBERON:0009856,6.45e-13,26;UBERON:0002331,1.13e-12,10;UBERON:0000358,1.13e-12,10;UBERON:0000307,1.13e-12,10;UBERON:0000091,1.13e-12,10;UBERON:0000087,1.13e-12,10;UBERON:0007010,1.13e-12,10;UBERON:0007806,1.13e-12,10;UBERON:0008780,1.13e-12,10;UBERON:0005728,1.13e-12,10;UBERON:0002365,7.91e-11,31;UBERON:0002330,7.91e-11,31;UBERON:0002368,1.39e-09,35;UBERON:0000178,1.23e-08,15;UBERON:0000179,1.23e-08,15;UBERON:0000463,1.23e-08,15;UBERON:0005172,1.29e-08,54;UBERON:0005173,1.29e-08,54;UBERON:0002417,1.02e-07,60;UBERON:0000916,1.02e-07,60;UBERON:0000949,1.96e-07,45 | |||
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| ||
|short_description=p@chr18:20453030..20453036,- | |short_description=p@chr18:20453030..20453036,- | ||
}} | }} |
Latest revision as of 23:55, 25 July 2015
Short description: | p@chr18:20453030..20453036, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:20453030..20453036, - |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.88e-11 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.13e-17 | 19 |
digestive gland | 1.13e-17 | 19 |
liver bud | 1.13e-17 | 19 |
hepatic diverticulum | 2.89e-15 | 22 |
liver primordium | 2.89e-15 | 22 |
digestive tract diverticulum | 1.33e-14 | 23 |
uterus or analog | 2.11e-14 | 1 |
epithelial sac | 1.96e-13 | 25 |
epithelium of foregut-midgut junction | 1.96e-13 | 25 |
anatomical boundary | 1.96e-13 | 25 |
hepatobiliary system | 1.96e-13 | 25 |
foregut-midgut junction | 1.96e-13 | 25 |
septum transversum | 1.96e-13 | 25 |
sac | 6.45e-13 | 26 |
umbilical cord | 1.13e-12 | 10 |
blastocyst | 1.13e-12 | 10 |
blastula | 1.13e-12 | 10 |
bilaminar disc | 1.13e-12 | 10 |
inner cell mass | 1.13e-12 | 10 |
cleaving embryo | 1.13e-12 | 10 |
connecting stalk | 1.13e-12 | 10 |
inner cell mass derived epiblast | 1.13e-12 | 10 |
extraembryonic mesoderm | 1.13e-12 | 10 |
exocrine gland | 7.91e-11 | 31 |
exocrine system | 7.91e-11 | 31 |
endocrine gland | 1.39e-09 | 35 |
blood | 1.23e-08 | 15 |
haemolymphatic fluid | 1.23e-08 | 15 |
organism substance | 1.23e-08 | 15 |
abdomen element | 1.29e-08 | 54 |
abdominal segment element | 1.29e-08 | 54 |
abdominal segment of trunk | 1.02e-07 | 60 |
abdomen | 1.02e-07 | 60 |
endocrine system | 1.96e-07 | 45 |