FFCP PHASE1:Hg19::chr12:92996303..92996317,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:92996303..92996317,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr12:92996303..92996317,- | |description=CAGE_peak_at_chr12:92996303..92996317,- | ||
|id=chr12:92996303..92996317,- | |id=chr12:92996303..92996317,- | ||
|ontology_enrichment_celltype=CL:0002057!1.49e-57!42;CL:0000860!4.02e-53!45;CL:0002194!2.26e-37!63;CL:0000576!2.26e-37!63;CL:0000040!2.26e-37!63;CL:0000559!2.26e-37!63;CL:0000766!1.75e-36!76;CL:0002009!5.75e-36!65;CL:0000839!8.41e-33!70;CL:0000557!3.20e-32!71;CL:0000738!1.77e-23!140;CL:0002087!7.71e-23!119;CL:0000763!8.37e-22!112;CL:0000049!8.37e-22!112;CL:0002031!2.26e-17!124;CL:0000037!3.69e-17!172;CL:0000566!3.69e-17!172;CL:0000988!1.20e-15!182;CL:0002032!6.80e-14!165;CL:0000837!6.80e-14!165;CL:0000767!1.39e-09!3;CL:0000842!2.76e-09!3;CL:0000068!5.73e-09!3;CL:0000069!5.73e-09!3;CL:0000307!5.73e-09!3;CL:0000377!5.73e-09!3;CL:0000063!2.50e-07!578;CL:0002371!2.61e-07!591;CL:0000144!3.06e-07!625;CL:0000224!4.73e-07!4;CL:0002368!4.85e-07!13;CL:0000134!6.66e-07!358 | |ontology_enrichment_celltype=CL:0002057!1.49e-57!42;CL:0000860!4.02e-53!45;CL:0002194!2.26e-37!63;CL:0000576!2.26e-37!63;CL:0000040!2.26e-37!63;CL:0000559!2.26e-37!63;CL:0000766!1.75e-36!76;CL:0002009!5.75e-36!65;CL:0000839!8.41e-33!70;CL:0000557!3.20e-32!71;CL:0000738!1.77e-23!140;CL:0002087!7.71e-23!119;CL:0000763!8.37e-22!112;CL:0000049!8.37e-22!112;CL:0002031!2.26e-17!124;CL:0000037!3.69e-17!172;CL:0000566!3.69e-17!172;CL:0000988!1.20e-15!182;CL:0002032!6.80e-14!165;CL:0000837!6.80e-14!165;CL:0000767!1.39e-09!3;CL:0000842!2.76e-09!3;CL:0000068!5.73e-09!3;CL:0000069!5.73e-09!3;CL:0000307!5.73e-09!3;CL:0000377!5.73e-09!3;CL:0000063!2.50e-07!578;CL:0002371!2.61e-07!591;CL:0000144!3.06e-07!625;CL:0000224!4.73e-07!4;CL:0002368!4.85e-07!13;CL:0000134!6.66e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.27e-75;33!CL:0002057;6.27e-75;33!CL:0000473;5.74e-51;39!CL:0000234;5.74e-51;39!CL:0000576;2.79e-42;48!CL:0000766;2.29e-30;69!CL:0000767;3.12e-16;3!CL:0002087;2.01e-14;104!CL:0000763;7.71e-13;100!CL:0002393;8.18e-09;6!CL:0002397;8.18e-09;6!CL:0000738;4.35e-08;136!CL:0000226;1.13e-07;3!CL:0000842;1.13e-07;3!CL:0000307;1.13e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.06e-81,42;CL:0002057,1.06e-81,42;CL:0000473,8.50e-71,48;CL:0000234,8.50e-71,48;CL:0000766,2.32e-60,72;CL:0002194,4.68e-60,59;CL:0000576,4.68e-60,59;CL:0000040,4.68e-60,59;CL:0000559,4.68e-60,59;CL:0002009,6.20e-58,61;CL:0000839,3.49e-53,66;CL:0000557,2.57e-52,67;CL:0000763,2.10e-38,108;CL:0000049,2.10e-38,108;CL:0000738,7.58e-34,136;CL:0002087,4.35e-33,115;CL:0002031,7.19e-27,120;CL:0000037,3.17e-26,168;CL:0000988,1.42e-24,177;CL:0002032,8.21e-24,161;CL:0000837,8.21e-24,161;CL:0000767,3.38e-16,3;CL:0000134,4.56e-09,354;CL:0002320,9.15e-09,361;CL:0000226,9.52e-08,3;CL:0000842,9.52e-08,3;CL:0000219,1.06e-07,386;CL:0000068,1.17e-07,3;CL:0000069,1.17e-07,3;CL:0000307,1.17e-07,3;CL:0000377,1.17e-07,3;CL:0000034,2.25e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;2.96e-60;42!CL:0000049;1.94e-08;108!CL:0000377;1.13e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.18e-27!80;UBERON:0001474!3.87e-25!86;UBERON:0002390!9.53e-25!102;UBERON:0003061!9.53e-25!102;UBERON:0004765!3.82e-23!101;UBERON:0001434!3.82e-23!101;UBERON:0002193!1.01e-21!112;UBERON:0002405!6.11e-18!115;UBERON:0002204!2.65e-13!167;UBERON:0003081!4.05e-09!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.57e-45,76;UBERON:0001474,8.02e-42,82;UBERON:0002390,8.28e-40,98;UBERON:0003061,8.28e-40,98;UBERON:0004765,1.23e-37,90;UBERON:0002405,2.98e-36,93;UBERON:0002193,1.33e-35,108;UBERON:0001434,2.44e-33,100;UBERON:0002204,9.99e-18,167;UBERON:0003081,3.48e-16,203;UBERON:0002384,2.37e-08,371;UBERON:0000926,2.76e-08,315;UBERON:0004120,2.76e-08,315;UBERON:0006603,2.76e-08,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54027849164014,3.45446458287491,2.78669021968937,0,0,0,0,0,0,52.6295638105284,19.2522669571336,12.3696196308036,0,0,0,0.872389432677388,0,0,4.18372266430232,2.87817521615278,4.02618282163635,18.1246207162955,3.84241059793651,18.6820961611982,135.829798210228,47.1203819016193,51.4620649058499,3.76484679085209,2.72906150057846,8.53949240891322,272.414664210103,153.083145915297,181.571743726928,0,0.199463657621632,0.426224750532694,73.4229373730318,29.5040316839393,45.466024176677,1.25624332628372,0.521482918420201,1.08594422352558,18.1619850790011,43.4567610465326,85.1283822215979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,3.92355994087075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.33886874027479,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.201057944823262,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985153801009636,0,0.77005821767849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,1.94142780736755,2.98837161849644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,0,0,0,0,0,0,0,0,0.0852266274161009,0,0.330569830721956,0.192190067365106,2.55225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,1.34060455107157,2.17781969722645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295710299979268,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54027849164014,3.45446458287491,2.78669021968937,0,0,0,0,0,0,52.6295638105284,19.2522669571336,12.3696196308036,0,0,0,0.872389432677388,0,0,4.18372266430232,2.87817521615278,4.02618282163635,18.1246207162955,3.84241059793651,18.6820961611982,135.829798210228,47.1203819016193,51.4620649058499,3.76484679085209,2.72906150057846,8.53949240891322,272.414664210103,153.083145915297,181.571743726928,0,0.199463657621632,0.426224750532694,73.4229373730318,29.5040316839393,45.466024176677,1.25624332628372,0.521482918420201,1.08594422352558,18.1619850790011,43.4567610465326,85.1283822215979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,3.92355994087075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.33886874027479,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.201057944823262,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985153801009636,0,0.77005821767849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,1.94142780736755,2.98837161849644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,0,0,0,0,0,0,0,0,0.0852266274161009,0,0.330569830721956,0.192190067365106,2.55225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,1.34060455107157,2.17781969722645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295710299979268,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:92996303..92996317,- | |short_description=p@chr12:92996303..92996317,- | ||
}} | }} |
Latest revision as of 13:37, 24 July 2015
Short description: | p@chr12:92996303..92996317, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:92996303..92996317, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.57e-45 | 76 |
bone element | 8.02e-42 | 82 |
hematopoietic system | 8.28e-40 | 98 |
blood island | 8.28e-40 | 98 |
skeletal element | 1.23e-37 | 90 |
immune system | 2.98e-36 | 93 |
hemolymphoid system | 1.33e-35 | 108 |
skeletal system | 2.44e-33 | 100 |
musculoskeletal system | 9.99e-18 | 167 |
lateral plate mesoderm | 3.48e-16 | 203 |
connective tissue | 2.37e-08 | 371 |
mesoderm | 2.76e-08 | 315 |
mesoderm-derived structure | 2.76e-08 | 315 |
presumptive mesoderm | 2.76e-08 | 315 |